EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000009179 (Gene tree)
Gene ID: 487053
Gene Symbol: RAD54B
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 86239 bases
Position: chr29:39108785-39195023
Accession: 54119
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000013503	ResIII	PF04851.15	7.3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000014598	-	3031	XM_005638132	ENSCAFP00000013503	912 (aa)	XP_005638189	F1PW14

Gene Model

Click here to download ENSCAFG00000009179's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009179's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000009179	RAD54B	75	43.750	ENSCAFG00000004272	RAD54L	89	43.750
ENSCAFG00000009179	RAD54B	59	31.167	ENSCAFG00000001219	ERCC6L2	63	31.167
ENSCAFG00000009179	RAD54B	55	30.097	ENSCAFG00000010944	CHD1L	50	30.097
ENSCAFG00000009179	RAD54B	51	30.290	ENSCAFG00000018673	SMARCA1	50	30.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000009179	RAD54B	79	88.966	ENSG00000265817	FSBP	99	88.966	Homo_sapiens
ENSCAFG00000009179	RAD54B	99	85.385	ENSG00000197275	RAD54B	99	85.385	Homo_sapiens
ENSCAFG00000009179	RAD54B	99	92.975	ENSAMEG00000005834	-	100	92.975	Ailuropoda_melanoleuca
ENSCAFG00000009179	RAD54B	99	55.277	ENSACIG00000013005	rad54b	99	55.277	Amphilophus_citrinellus
ENSCAFG00000009179	RAD54B	99	55.191	ENSAOCG00000008523	rad54b	99	55.191	Amphiprion_ocellaris
ENSCAFG00000009179	RAD54B	99	55.628	ENSAPEG00000001673	rad54b	99	55.786	Amphiprion_percula
ENSCAFG00000009179	RAD54B	99	55.098	ENSATEG00000001527	rad54b	99	55.098	Anabas_testudineus
ENSCAFG00000009179	RAD54B	99	68.634	ENSAPLG00000014366	-	99	68.634	Anas_platyrhynchos
ENSCAFG00000009179	RAD54B	87	71.717	ENSACAG00000003671	-	99	71.717	Anolis_carolinensis
ENSCAFG00000009179	RAD54B	71	86.265	ENSANAG00000019528	-	99	86.265	Aotus_nancymaae
ENSCAFG00000009179	RAD54B	99	55.338	ENSACLG00000007826	rad54b	99	55.338	Astatotilapia_calliptera
ENSCAFG00000009179	RAD54B	85	58.302	ENSAMXG00000039985	rad54b	94	58.166	Astyanax_mexicanus
ENSCAFG00000009179	RAD54B	99	86.169	ENSBTAG00000000632	RAD54B	100	86.169	Bos_taurus
ENSCAFG00000009179	RAD54B	80	35.686	WBGene00013792	Y116A8C.13	98	33.026	Caenorhabditis_elegans
ENSCAFG00000009179	RAD54B	99	83.205	ENSCJAG00000000080	-	99	86.897	Callithrix_jacchus
ENSCAFG00000009179	RAD54B	100	99.671	ENSCAFG00020012084	-	100	99.671	Canis_lupus_dingo
ENSCAFG00000009179	RAD54B	99	85.510	ENSCHIG00000008230	-	100	85.510	Capra_hircus
ENSCAFG00000009179	RAD54B	99	84.083	ENSTSYG00000013234	-	100	84.083	Carlito_syrichta
ENSCAFG00000009179	RAD54B	99	81.010	ENSCPOG00000011643	-	99	81.010	Cavia_porcellus
ENSCAFG00000009179	RAD54B	99	83.315	ENSCCAG00000011754	-	99	86.897	Cebus_capucinus
ENSCAFG00000009179	RAD54B	99	85.165	ENSCATG00000030661	-	99	88.966	Cercocebus_atys
ENSCAFG00000009179	RAD54B	99	81.868	ENSCLAG00000010476	-	99	81.868	Chinchilla_lanigera
ENSCAFG00000009179	RAD54B	99	85.165	ENSCSAG00000012712	-	99	85.165	Chlorocebus_sabaeus
ENSCAFG00000009179	RAD54B	99	68.621	ENSCPBG00000003204	-	99	69.022	Chrysemys_picta_bellii
ENSCAFG00000009179	RAD54B	99	85.495	ENSCANG00000017939	-	99	88.966	Colobus_angolensis_palliatus
ENSCAFG00000009179	RAD54B	99	77.327	ENSCGRG00001020184	Rad54b	100	77.327	Cricetulus_griseus_chok1gshd
ENSCAFG00000009179	RAD54B	99	75.761	ENSCGRG00000016752	Rad54b	100	75.761	Cricetulus_griseus_crigri
ENSCAFG00000009179	RAD54B	86	58.764	ENSCSEG00000001601	rad54b	93	58.764	Cynoglossus_semilaevis
ENSCAFG00000009179	RAD54B	99	57.746	ENSCVAG00000009200	rad54b	99	57.530	Cyprinodon_variegatus
ENSCAFG00000009179	RAD54B	99	53.182	ENSDARG00000092134	rad54b	100	60.890	Danio_rerio
ENSCAFG00000009179	RAD54B	99	82.604	ENSDNOG00000015535	-	99	82.604	Dasypus_novemcinctus
ENSCAFG00000009179	RAD54B	99	80.154	ENSDORG00000002492	Rad54b	100	80.154	Dipodomys_ordii
ENSCAFG00000009179	RAD54B	87	79.545	ENSETEG00000010605	-	100	79.545	Echinops_telfairi
ENSCAFG00000009179	RAD54B	99	47.696	ENSEBUG00000009104	rad54b	98	47.696	Eptatretus_burgeri
ENSCAFG00000009179	RAD54B	97	86.102	ENSEASG00005004021	-	100	86.102	Equus_asinus_asinus
ENSCAFG00000009179	RAD54B	99	86.842	ENSECAG00000021949	-	99	86.842	Equus_caballus
ENSCAFG00000009179	RAD54B	83	81.988	ENSEEUG00000008056	-	83	81.988	Erinaceus_europaeus
ENSCAFG00000009179	RAD54B	99	54.074	ENSELUG00000009287	rad54b	99	54.286	Esox_lucius
ENSCAFG00000009179	RAD54B	99	90.889	ENSFCAG00000015513	-	100	92.700	Felis_catus
ENSCAFG00000009179	RAD54B	99	67.467	ENSFALG00000005467	-	99	67.467	Ficedula_albicollis
ENSCAFG00000009179	RAD54B	99	82.527	ENSFDAG00000020541	-	100	82.527	Fukomys_damarensis
ENSCAFG00000009179	RAD54B	89	57.627	ENSFHEG00000014382	rad54b	90	57.627	Fundulus_heteroclitus
ENSCAFG00000009179	RAD54B	86	57.285	ENSGMOG00000014774	rad54b	98	57.285	Gadus_morhua
ENSCAFG00000009179	RAD54B	99	67.760	ENSGALG00000043597	RAD54B	99	67.760	Gallus_gallus
ENSCAFG00000009179	RAD54B	99	56.441	ENSGAFG00000007901	rad54b	99	56.441	Gambusia_affinis
ENSCAFG00000009179	RAD54B	99	55.927	ENSGACG00000009128	rad54b	99	55.914	Gasterosteus_aculeatus
ENSCAFG00000009179	RAD54B	99	68.519	ENSGAGG00000018747	-	99	68.519	Gopherus_agassizii
ENSCAFG00000009179	RAD54B	99	85.071	ENSGGOG00000023516	-	100	85.071	Gorilla_gorilla
ENSCAFG00000009179	RAD54B	100	54.459	ENSHBUG00000016017	rad54b	99	54.459	Haplochromis_burtoni
ENSCAFG00000009179	RAD54B	99	81.699	ENSHGLG00000008263	RAD54B	99	81.699	Heterocephalus_glaber_female
ENSCAFG00000009179	RAD54B	99	80.952	ENSHGLG00100008108	-	99	80.952	Heterocephalus_glaber_male
ENSCAFG00000009179	RAD54B	99	54.545	ENSHCOG00000004764	rad54b	99	55.529	Hippocampus_comes
ENSCAFG00000009179	RAD54B	99	53.102	ENSIPUG00000018531	rad54b	99	53.102	Ictalurus_punctatus
ENSCAFG00000009179	RAD54B	99	81.567	ENSSTOG00000010791	-	99	81.567	Ictidomys_tridecemlineatus
ENSCAFG00000009179	RAD54B	99	78.947	ENSJJAG00000010314	Rad54b	100	78.947	Jaculus_jaculus
ENSCAFG00000009179	RAD54B	99	54.575	ENSKMAG00000004744	rad54b	99	54.575	Kryptolebias_marmoratus
ENSCAFG00000009179	RAD54B	81	68.984	ENSLACG00000000859	-	100	68.984	Latimeria_chalumnae
ENSCAFG00000009179	RAD54B	100	59.023	ENSLOCG00000010100	rad54b	98	62.395	Lepisosteus_oculatus
ENSCAFG00000009179	RAD54B	89	84.054	ENSLAFG00000015315	-	100	84.054	Loxodonta_africana
ENSCAFG00000009179	RAD54B	99	84.945	ENSMFAG00000031629	-	99	88.552	Macaca_fascicularis
ENSCAFG00000009179	RAD54B	99	84.945	ENSMMUG00000005659	-	99	84.945	Macaca_mulatta
ENSCAFG00000009179	RAD54B	99	84.945	ENSMNEG00000016408	-	99	84.945	Macaca_nemestrina
ENSCAFG00000009179	RAD54B	99	85.385	ENSMLEG00000006946	-	99	85.385	Mandrillus_leucophaeus
ENSCAFG00000009179	RAD54B	99	56.048	ENSMAMG00000012269	rad54b	99	56.048	Mastacembelus_armatus
ENSCAFG00000009179	RAD54B	99	54.633	ENSMZEG00005005281	rad54b	95	60.076	Maylandia_zebra
ENSCAFG00000009179	RAD54B	99	67.869	ENSMGAG00000012024	-	99	67.869	Meleagris_gallopavo
ENSCAFG00000009179	RAD54B	99	76.451	ENSMAUG00000013586	Rad54b	100	76.451	Mesocricetus_auratus
ENSCAFG00000009179	RAD54B	99	81.648	ENSMICG00000000754	-	99	81.648	Microcebus_murinus
ENSCAFG00000009179	RAD54B	99	76.039	ENSMOCG00000020035	Rad54b	99	76.039	Microtus_ochrogaster
ENSCAFG00000009179	RAD54B	99	54.437	ENSMMOG00000003394	rad54b	99	54.437	Mola_mola
ENSCAFG00000009179	RAD54B	88	75.995	ENSMODG00000007343	-	99	75.995	Monodelphis_domestica
ENSCAFG00000009179	RAD54B	71	60.775	ENSMALG00000001520	rad54b	99	60.775	Monopterus_albus
ENSCAFG00000009179	RAD54B	99	77.218	MGP_CAROLIEiJ_G0025810	Rad54b	100	77.218	Mus_caroli
ENSCAFG00000009179	RAD54B	99	77.083	ENSMUSG00000078773	Rad54b	100	77.083	Mus_musculus
ENSCAFG00000009179	RAD54B	99	77.766	MGP_PahariEiJ_G0023933	Rad54b	100	77.766	Mus_pahari
ENSCAFG00000009179	RAD54B	99	77.656	MGP_SPRETEiJ_G0026758	Rad54b	100	77.656	Mus_spretus
ENSCAFG00000009179	RAD54B	89	92.099	ENSMPUG00000008878	-	100	92.099	Mustela_putorius_furo
ENSCAFG00000009179	RAD54B	99	83.882	ENSMLUG00000008953	-	99	83.882	Myotis_lucifugus
ENSCAFG00000009179	RAD54B	99	79.956	ENSNGAG00000017537	Rad54b	100	79.956	Nannospalax_galili
ENSCAFG00000009179	RAD54B	99	55.180	ENSNBRG00000013394	rad54b	99	55.180	Neolamprologus_brichardi
ENSCAFG00000009179	RAD54B	99	85.055	ENSNLEG00000003062	-	99	88.690	Nomascus_leucogenys
ENSCAFG00000009179	RAD54B	82	72.131	ENSMEUG00000012426	-	82	72.131	Notamacropus_eugenii
ENSCAFG00000009179	RAD54B	99	80.811	ENSODEG00000019564	-	100	80.811	Octodon_degus
ENSCAFG00000009179	RAD54B	89	78.121	ENSODEG00000002650	-	96	84.615	Octodon_degus
ENSCAFG00000009179	RAD54B	99	55.822	ENSONIG00000006067	rad54b	99	55.822	Oreochromis_niloticus
ENSCAFG00000009179	RAD54B	82	75.166	ENSOANG00000011348	-	100	75.166	Ornithorhynchus_anatinus
ENSCAFG00000009179	RAD54B	99	82.237	ENSOCUG00000016478	-	99	82.237	Oryctolagus_cuniculus
ENSCAFG00000009179	RAD54B	99	55.591	ENSORLG00000008918	rad54b	99	63.369	Oryzias_latipes
ENSCAFG00000009179	RAD54B	71	63.369	ENSORLG00020012171	rad54b	99	63.369	Oryzias_latipes_hni
ENSCAFG00000009179	RAD54B	99	55.614	ENSORLG00015018536	rad54b	99	55.614	Oryzias_latipes_hsok
ENSCAFG00000009179	RAD54B	84	60.516	ENSOMEG00000004345	rad54b	99	60.516	Oryzias_melastigma
ENSCAFG00000009179	RAD54B	99	82.986	ENSOGAG00000007854	-	99	82.986	Otolemur_garnettii
ENSCAFG00000009179	RAD54B	89	88.192	ENSOARG00000007691	-	100	88.192	Ovis_aries
ENSCAFG00000009179	RAD54B	99	83.736	ENSPPAG00000029572	-	99	83.736	Pan_paniscus
ENSCAFG00000009179	RAD54B	99	90.779	ENSPPRG00000007571	-	100	92.837	Panthera_pardus
ENSCAFG00000009179	RAD54B	80	92.837	ENSPTIG00000012670	-	100	92.837	Panthera_tigris_altaica
ENSCAFG00000009179	RAD54B	99	85.165	ENSPTRG00000020427	-	99	88.828	Pan_troglodytes
ENSCAFG00000009179	RAD54B	99	85.275	ENSPANG00000019566	-	99	85.275	Papio_anubis
ENSCAFG00000009179	RAD54B	99	59.259	ENSPKIG00000014974	rad54b	99	59.259	Paramormyrops_kingsleyae
ENSCAFG00000009179	RAD54B	99	67.101	ENSPSIG00000002383	-	98	71.728	Pelodiscus_sinensis
ENSCAFG00000009179	RAD54B	99	77.218	ENSPEMG00000012133	Rad54b	100	77.218	Peromyscus_maniculatus_bairdii
ENSCAFG00000009179	RAD54B	86	58.552	ENSPMAG00000002916	rad54b	99	58.801	Petromyzon_marinus
ENSCAFG00000009179	RAD54B	88	77.625	ENSPCIG00000020151	-	94	77.000	Phascolarctos_cinereus
ENSCAFG00000009179	RAD54B	99	55.732	ENSPFOG00000023411	rad54b	99	55.732	Poecilia_formosa
ENSCAFG00000009179	RAD54B	99	55.839	ENSPLAG00000010430	rad54b	99	55.839	Poecilia_latipinna
ENSCAFG00000009179	RAD54B	99	55.579	ENSPMEG00000016873	rad54b	95	60.296	Poecilia_mexicana
ENSCAFG00000009179	RAD54B	99	56.489	ENSPREG00000018443	rad54b	99	56.489	Poecilia_reticulata
ENSCAFG00000009179	RAD54B	99	84.945	ENSPPYG00000018750	-	99	84.945	Pongo_abelii
ENSCAFG00000009179	RAD54B	99	85.620	ENSPCOG00000026845	-	99	88.414	Propithecus_coquereli
ENSCAFG00000009179	RAD54B	87	88.799	ENSPVAG00000000261	-	92	88.799	Pteropus_vampyrus
ENSCAFG00000009179	RAD54B	87	59.673	ENSPNYG00000018303	rad54b	96	59.673	Pundamilia_nyererei
ENSCAFG00000009179	RAD54B	99	53.946	ENSPNAG00000000295	rad54b	99	53.946	Pygocentrus_nattereri
ENSCAFG00000009179	RAD54B	99	75.027	ENSRNOG00000039949	Rad54b	100	75.027	Rattus_norvegicus
ENSCAFG00000009179	RAD54B	99	84.945	ENSRBIG00000020419	-	99	84.945	Rhinopithecus_bieti
ENSCAFG00000009179	RAD54B	99	84.945	ENSRROG00000039897	-	99	84.945	Rhinopithecus_roxellana
ENSCAFG00000009179	RAD54B	62	41.883	YBR073W	RDH54	61	42.045	Saccharomyces_cerevisiae
ENSCAFG00000009179	RAD54B	99	83.425	ENSSBOG00000028501	-	99	83.425	Saimiri_boliviensis_boliviensis
ENSCAFG00000009179	RAD54B	99	72.519	ENSSHAG00000017038	-	99	72.519	Sarcophilus_harrisii
ENSCAFG00000009179	RAD54B	65	64.775	ENSSFOG00015008483	rad54b	92	64.775	Scleropages_formosus
ENSCAFG00000009179	RAD54B	99	53.010	ENSSMAG00000018659	rad54b	99	54.317	Scophthalmus_maximus
ENSCAFG00000009179	RAD54B	99	54.633	ENSSDUG00000001122	rad54b	98	54.904	Seriola_dumerili
ENSCAFG00000009179	RAD54B	99	54.641	ENSSLDG00000013787	rad54b	99	54.641	Seriola_lalandi_dorsalis
ENSCAFG00000009179	RAD54B	99	66.813	ENSSPUG00000016497	-	99	66.813	Sphenodon_punctatus
ENSCAFG00000009179	RAD54B	99	55.761	ENSSPAG00000012800	rad54b	99	55.761	Stegastes_partitus
ENSCAFG00000009179	RAD54B	99	84.945	ENSSSCG00000006101	-	99	88.625	Sus_scrofa
ENSCAFG00000009179	RAD54B	99	66.993	ENSTGUG00000011880	-	99	66.993	Taeniopygia_guttata
ENSCAFG00000009179	RAD54B	99	53.846	ENSTRUG00000010015	rad54b	99	54.440	Takifugu_rubripes
ENSCAFG00000009179	RAD54B	99	82.986	ENSTTRG00000006312	-	100	82.986	Tursiops_truncatus
ENSCAFG00000009179	RAD54B	99	92.975	ENSUMAG00000016401	-	100	92.975	Ursus_maritimus
ENSCAFG00000009179	RAD54B	99	84.193	ENSVPAG00000003157	-	100	84.193	Vicugna_pacos
ENSCAFG00000009179	RAD54B	99	54.885	ENSXETG00000025924	rad54b	99	59.250	Xenopus_tropicalis
ENSCAFG00000009179	RAD54B	99	55.713	ENSXMAG00000013141	rad54b	99	55.713	Xiphophorus_maculatus