EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000009210 (Gene tree)
Gene ID: 477380
Gene Symbol: R3HCC1
Alias: -
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 22083 bases
Position: chr25:34184880-34206962
Accession: 45242
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000040119	R3H	PF01424.22	7.3e-17	1	1
ENSCAFP00000013538	R3H	PF01424.22	8.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000014638	-	1443	-	ENSCAFP00000013538	480 (aa)	-	F1PVY9
ENSCAFT00000047453	-	4542	XM_005635701	ENSCAFP00000040119	458 (aa)	XP_005635758	J9P3J0

Gene Model

Click here to download ENSCAFG00000009210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009210's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000009210	R3HCC1	96	77.602	ENSG00000104679	R3HCC1	100	97.674	Homo_sapiens
ENSCAFG00000009210	R3HCC1	73	40.141	ENSAPOG00000003616	r3hcc1	65	45.395	Acanthochromis_polyacanthus
ENSCAFG00000009210	R3HCC1	97	88.989	ENSAMEG00000002963	R3HCC1	93	89.013	Ailuropoda_melanoleuca
ENSCAFG00000009210	R3HCC1	89	34.772	ENSAOCG00000003945	r3hcc1	97	34.689	Amphiprion_ocellaris
ENSCAFG00000009210	R3HCC1	89	34.204	ENSAPEG00000003613	r3hcc1	97	33.971	Amphiprion_percula
ENSCAFG00000009210	R3HCC1	59	42.177	ENSATEG00000023860	r3hcc1	70	41.975	Anabas_testudineus
ENSCAFG00000009210	R3HCC1	94	45.733	ENSACAG00000016627	R3HCC1	97	45.415	Anolis_carolinensis
ENSCAFG00000009210	R3HCC1	96	75.676	ENSANAG00000036169	R3HCC1	96	77.928	Aotus_nancymaae
ENSCAFG00000009210	R3HCC1	98	75.055	ENSBTAG00000025830	R3HCC1	99	74.398	Bos_taurus
ENSCAFG00000009210	R3HCC1	99	75.468	ENSCJAG00000020118	R3HCC1	99	70.413	Callithrix_jacchus
ENSCAFG00000009210	R3HCC1	81	98.656	ENSCAFG00020012870	R3HCC1	87	98.656	Canis_lupus_dingo
ENSCAFG00000009210	R3HCC1	96	70.306	ENSCHIG00000009107	R3HCC1	100	69.651	Capra_hircus
ENSCAFG00000009210	R3HCC1	98	78.366	ENSTSYG00000000511	R3HCC1	79	78.366	Carlito_syrichta
ENSCAFG00000009210	R3HCC1	85	56.481	ENSCAPG00000015813	R3HCC1	100	56.250	Cavia_aperea
ENSCAFG00000009210	R3HCC1	95	63.848	ENSCPOG00000009696	R3HCC1	100	63.425	Cavia_porcellus
ENSCAFG00000009210	R3HCC1	96	76.018	ENSCCAG00000037811	R3HCC1	92	77.878	Cebus_capucinus
ENSCAFG00000009210	R3HCC1	96	77.828	ENSCATG00000032971	R3HCC1	99	70.183	Cercocebus_atys
ENSCAFG00000009210	R3HCC1	97	71.011	ENSCLAG00000015556	R3HCC1	86	71.300	Chinchilla_lanigera
ENSCAFG00000009210	R3HCC1	96	78.281	ENSCSAG00000016250	R3HCC1	92	77.828	Chlorocebus_sabaeus
ENSCAFG00000009210	R3HCC1	95	72.955	ENSCHOG00000000396	R3HCC1	96	72.955	Choloepus_hoffmanni
ENSCAFG00000009210	R3HCC1	96	78.104	ENSCANG00000029441	R3HCC1	92	77.652	Colobus_angolensis_palliatus
ENSCAFG00000009210	R3HCC1	94	59.290	ENSCGRG00001014977	R3hcc1	99	61.378	Cricetulus_griseus_chok1gshd
ENSCAFG00000009210	R3HCC1	94	59.290	ENSCGRG00000004454	R3hcc1	99	61.378	Cricetulus_griseus_crigri
ENSCAFG00000009210	R3HCC1	91	33.864	ENSCSEG00000005748	r3hcc1	76	47.059	Cynoglossus_semilaevis
ENSCAFG00000009210	R3HCC1	78	32.895	ENSCVAG00000002640	r3hcc1	95	31.746	Cyprinodon_variegatus
ENSCAFG00000009210	R3HCC1	92	34.906	ENSDARG00000099593	r3hcc1	97	33.967	Danio_rerio
ENSCAFG00000009210	R3HCC1	96	76.629	ENSDNOG00000007168	R3HCC1	92	76.629	Dasypus_novemcinctus
ENSCAFG00000009210	R3HCC1	94	60.752	ENSDORG00000026365	R3hcc1	99	64.271	Dipodomys_ordii
ENSCAFG00000009210	R3HCC1	96	66.140	ENSETEG00000001147	R3HCC1	97	66.140	Echinops_telfairi
ENSCAFG00000009210	R3HCC1	97	80.942	ENSEASG00005018782	R3HCC1	81	80.493	Equus_asinus_asinus
ENSCAFG00000009210	R3HCC1	97	80.269	ENSECAG00000025013	R3HCC1	99	79.821	Equus_caballus
ENSCAFG00000009210	R3HCC1	97	72.707	ENSEEUG00000011918	R3HCC1	98	72.483	Erinaceus_europaeus
ENSCAFG00000009210	R3HCC1	89	34.491	ENSELUG00000023650	r3hcc1	63	54.054	Esox_lucius
ENSCAFG00000009210	R3HCC1	98	87.723	ENSFCAG00000012395	R3HCC1	99	87.528	Felis_catus
ENSCAFG00000009210	R3HCC1	71	49.351	ENSFALG00000001646	R3HCC1	56	49.351	Ficedula_albicollis
ENSCAFG00000009210	R3HCC1	95	64.642	ENSFDAG00000001572	R3HCC1	98	64.410	Fukomys_damarensis
ENSCAFG00000009210	R3HCC1	73	34.615	ENSGMOG00000017590	-	86	33.155	Gadus_morhua
ENSCAFG00000009210	R3HCC1	92	36.406	ENSGAFG00000008747	-	92	35.194	Gambusia_affinis
ENSCAFG00000009210	R3HCC1	93	34.253	ENSGACG00000008447	r3hcc1	97	34.253	Gasterosteus_aculeatus
ENSCAFG00000009210	R3HCC1	96	78.231	ENSGGOG00000013817	R3HCC1	99	77.931	Gorilla_gorilla
ENSCAFG00000009210	R3HCC1	95	70.252	ENSHGLG00000010517	R3HCC1	94	67.912	Heterocephalus_glaber_female
ENSCAFG00000009210	R3HCC1	95	70.252	ENSHGLG00100006388	R3HCC1	94	67.912	Heterocephalus_glaber_male
ENSCAFG00000009210	R3HCC1	64	45.578	ENSHCOG00000011745	r3hcc1	72	44.444	Hippocampus_comes
ENSCAFG00000009210	R3HCC1	97	35.955	ENSIPUG00000024504	r3hcc1	91	35.491	Ictalurus_punctatus
ENSCAFG00000009210	R3HCC1	95	66.441	ENSSTOG00000027130	R3HCC1	96	66.295	Ictidomys_tridecemlineatus
ENSCAFG00000009210	R3HCC1	94	62.527	ENSJJAG00000013075	R3hcc1	99	64.924	Jaculus_jaculus
ENSCAFG00000009210	R3HCC1	55	46.212	ENSKMAG00000000286	r3hcc1	71	40.764	Kryptolebias_marmoratus
ENSCAFG00000009210	R3HCC1	93	42.105	ENSLACG00000011894	R3HCC1	97	40.402	Latimeria_chalumnae
ENSCAFG00000009210	R3HCC1	93	35.214	ENSLOCG00000015442	r3hcc1	94	34.076	Lepisosteus_oculatus
ENSCAFG00000009210	R3HCC1	96	66.874	ENSLAFG00000016137	R3HCC1	96	68.737	Loxodonta_africana
ENSCAFG00000009210	R3HCC1	96	77.602	ENSMFAG00000032894	R3HCC1	99	69.954	Macaca_fascicularis
ENSCAFG00000009210	R3HCC1	96	77.602	ENSMMUG00000016655	R3HCC1	99	69.954	Macaca_mulatta
ENSCAFG00000009210	R3HCC1	96	77.602	ENSMNEG00000043283	R3HCC1	99	69.954	Macaca_nemestrina
ENSCAFG00000009210	R3HCC1	96	77.602	ENSMLEG00000030147	R3HCC1	92	77.149	Mandrillus_leucophaeus
ENSCAFG00000009210	R3HCC1	63	40.230	ENSMAMG00000018146	r3hcc1	98	31.336	Mastacembelus_armatus
ENSCAFG00000009210	R3HCC1	94	47.297	ENSMGAG00000001356	R3HCC1	91	47.297	Meleagris_gallopavo
ENSCAFG00000009210	R3HCC1	94	61.538	ENSMAUG00000016096	R3hcc1	99	61.966	Mesocricetus_auratus
ENSCAFG00000009210	R3HCC1	97	75.056	ENSMICG00000011146	R3HCC1	94	75.909	Microcebus_murinus
ENSCAFG00000009210	R3HCC1	95	61.066	ENSMOCG00000018508	R3hcc1	99	60.246	Microtus_ochrogaster
ENSCAFG00000009210	R3HCC1	93	50.664	ENSMODG00000016809	-	100	50.442	Monodelphis_domestica
ENSCAFG00000009210	R3HCC1	87	32.220	ENSMALG00000000731	r3hcc1	98	32.381	Monopterus_albus
ENSCAFG00000009210	R3HCC1	96	58.182	MGP_CAROLIEiJ_G0019467	R3hcc1	99	57.374	Mus_caroli
ENSCAFG00000009210	R3HCC1	96	57.778	ENSMUSG00000034194	R3hcc1	99	56.566	Mus_musculus
ENSCAFG00000009210	R3HCC1	94	58.418	MGP_PahariEiJ_G0030484	R3hcc1	81	77.070	Mus_pahari
ENSCAFG00000009210	R3HCC1	96	57.746	MGP_SPRETEiJ_G0020359	R3hcc1	99	56.539	Mus_spretus
ENSCAFG00000009210	R3HCC1	97	88.090	ENSMPUG00000003457	R3HCC1	95	85.062	Mustela_putorius_furo
ENSCAFG00000009210	R3HCC1	96	77.477	ENSMLUG00000000266	R3HCC1	93	80.000	Myotis_lucifugus
ENSCAFG00000009210	R3HCC1	95	66.009	ENSNGAG00000016747	R3hcc1	99	66.667	Nannospalax_galili
ENSCAFG00000009210	R3HCC1	95	71.591	ENSNLEG00000015944	R3HCC1	87	75.931	Nomascus_leucogenys
ENSCAFG00000009210	R3HCC1	94	56.621	ENSMEUG00000010587	R3HCC1	98	56.621	Notamacropus_eugenii
ENSCAFG00000009210	R3HCC1	96	67.342	ENSOPRG00000013390	R3HCC1	96	67.043	Ochotona_princeps
ENSCAFG00000009210	R3HCC1	93	64.655	ENSODEG00000007529	R3HCC1	99	64.693	Octodon_degus
ENSCAFG00000009210	R3HCC1	95	58.202	ENSOANG00000013877	R3HCC1	97	57.978	Ornithorhynchus_anatinus
ENSCAFG00000009210	R3HCC1	96	67.269	ENSOCUG00000023554	R3HCC1	87	67.191	Oryctolagus_cuniculus
ENSCAFG00000009210	R3HCC1	87	33.333	ENSORLG00000016816	r3hcc1	97	32.274	Oryzias_latipes
ENSCAFG00000009210	R3HCC1	87	33.252	ENSORLG00020012005	r3hcc1	99	31.981	Oryzias_latipes_hni
ENSCAFG00000009210	R3HCC1	87	33.902	ENSORLG00015007018	r3hcc1	99	33.017	Oryzias_latipes_hsok
ENSCAFG00000009210	R3HCC1	88	33.816	ENSOMEG00000000816	r3hcc1	99	32.212	Oryzias_melastigma
ENSCAFG00000009210	R3HCC1	96	73.864	ENSOGAG00000001291	R3HCC1	92	71.982	Otolemur_garnettii
ENSCAFG00000009210	R3HCC1	98	74.945	ENSOARG00000010146	R3HCC1	99	74.286	Ovis_aries
ENSCAFG00000009210	R3HCC1	96	77.602	ENSPPAG00000033165	R3HCC1	99	77.117	Pan_paniscus
ENSCAFG00000009210	R3HCC1	94	87.963	ENSPPRG00000002522	R3HCC1	99	88.194	Panthera_pardus
ENSCAFG00000009210	R3HCC1	87	86.432	ENSPTIG00000011230	R3HCC1	95	86.717	Panthera_tigris_altaica
ENSCAFG00000009210	R3HCC1	95	78.132	ENSPTRG00000020076	R3HCC1	99	72.055	Pan_troglodytes
ENSCAFG00000009210	R3HCC1	96	77.828	ENSPANG00000000453	R3HCC1	99	70.872	Papio_anubis
ENSCAFG00000009210	R3HCC1	85	37.280	ENSPKIG00000014426	-	93	36.935	Paramormyrops_kingsleyae
ENSCAFG00000009210	R3HCC1	85	36.387	ENSPKIG00000020397	-	94	35.176	Paramormyrops_kingsleyae
ENSCAFG00000009210	R3HCC1	94	48.552	ENSPSIG00000017664	R3HCC1	98	47.186	Pelodiscus_sinensis
ENSCAFG00000009210	R3HCC1	95	61.378	ENSPEMG00000007118	R3hcc1	99	62.630	Peromyscus_maniculatus_bairdii
ENSCAFG00000009210	R3HCC1	87	50.816	ENSPCIG00000022718	-	85	52.427	Phascolarctos_cinereus
ENSCAFG00000009210	R3HCC1	92	35.349	ENSPFOG00000022301	r3hcc1	90	34.554	Poecilia_formosa
ENSCAFG00000009210	R3HCC1	92	35.349	ENSPLAG00000010794	r3hcc1	90	34.783	Poecilia_latipinna
ENSCAFG00000009210	R3HCC1	92	35.349	ENSPMEG00000022515	r3hcc1	90	34.554	Poecilia_mexicana
ENSCAFG00000009210	R3HCC1	92	36.259	ENSPREG00000000713	r3hcc1	65	44.371	Poecilia_reticulata
ENSCAFG00000009210	R3HCC1	87	77.171	ENSPPYG00000018436	R3HCC1	99	76.675	Pongo_abelii
ENSCAFG00000009210	R3HCC1	73	82.895	ENSPCAG00000012229	R3HCC1	73	82.895	Procavia_capensis
ENSCAFG00000009210	R3HCC1	95	74.654	ENSPCOG00000027554	R3HCC1	99	75.115	Propithecus_coquereli
ENSCAFG00000009210	R3HCC1	96	76.351	ENSPVAG00000009829	R3HCC1	97	75.225	Pteropus_vampyrus
ENSCAFG00000009210	R3HCC1	90	34.058	ENSPNAG00000023875	r3hcc1	74	43.972	Pygocentrus_nattereri
ENSCAFG00000009210	R3HCC1	97	59.036	ENSRNOG00000016777	AABR07018321.1	83	54.709	Rattus_norvegicus
ENSCAFG00000009210	R3HCC1	95	77.574	ENSRBIG00000028045	R3HCC1	99	77.117	Rhinopithecus_bieti
ENSCAFG00000009210	R3HCC1	96	77.878	ENSRROG00000031126	R3HCC1	99	70.183	Rhinopithecus_roxellana
ENSCAFG00000009210	R3HCC1	94	77.701	ENSSBOG00000022590	R3HCC1	99	77.241	Saimiri_boliviensis_boliviensis
ENSCAFG00000009210	R3HCC1	95	52.759	ENSSHAG00000016526	-	99	52.318	Sarcophilus_harrisii
ENSCAFG00000009210	R3HCC1	86	37.437	ENSSFOG00015013507	r3hcc1	97	37.845	Scleropages_formosus
ENSCAFG00000009210	R3HCC1	87	31.655	ENSSMAG00000008647	r3hcc1	98	31.175	Scophthalmus_maximus
ENSCAFG00000009210	R3HCC1	68	79.021	ENSSARG00000013514	-	71	79.021	Sorex_araneus
ENSCAFG00000009210	R3HCC1	89	33.181	ENSSPAG00000013497	r3hcc1	98	31.868	Stegastes_partitus
ENSCAFG00000009210	R3HCC1	100	77.440	ENSSSCG00000039915	-	95	78.795	Sus_scrofa
ENSCAFG00000009210	R3HCC1	97	70.312	ENSSSCG00000037347	-	92	69.420	Sus_scrofa
ENSCAFG00000009210	R3HCC1	91	33.095	ENSTRUG00000015880	r3hcc1	98	33.726	Takifugu_rubripes
ENSCAFG00000009210	R3HCC1	95	68.493	ENSTTRG00000012247	R3HCC1	96	70.776	Tursiops_truncatus
ENSCAFG00000009210	R3HCC1	96	88.182	ENSUAMG00000007344	R3HCC1	100	88.182	Ursus_americanus
ENSCAFG00000009210	R3HCC1	100	97.598	ENSVVUG00000005056	R3HCC1	100	97.598	Vulpes_vulpes
ENSCAFG00000009210	R3HCC1	89	33.491	ENSXCOG00000017626	r3hcc1	89	33.729	Xiphophorus_couchianus