EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000009230 (Gene tree)
Gene ID: 478538
Gene Symbol: CMSS1
Alias: C3orf26|MGC4308
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 73075 bases
Position: chr33:6745097-6818171
Accession: 478538
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000013578	CMS1	PF14617.6	9.5e-34	1	1
ENSCAFP00000013578	DEAD	PF00270.29	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000014681	CMSS1-201	831	XM_005639383	ENSCAFP00000013578	276 (aa)	XP_005639440	E2RB18

Gene Model

Click here to download ENSCAFG00000009230's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009230's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000009230	CMSS1	95	90.038	ENSG00000184220	CMSS1	99	92.593	Homo_sapiens
ENSCAFG00000009230	CMSS1	73	64.851	ENSAPOG00000010604	cmss1	82	64.851	Acanthochromis_polyacanthus
ENSCAFG00000009230	CMSS1	93	93.436	ENSAMEG00000004092	CMSS1	100	93.436	Ailuropoda_melanoleuca
ENSCAFG00000009230	CMSS1	73	55.446	ENSACIG00000021854	cmss1	91	52.479	Amphilophus_citrinellus
ENSCAFG00000009230	CMSS1	73	64.851	ENSAOCG00000013361	cmss1	70	64.851	Amphiprion_ocellaris
ENSCAFG00000009230	CMSS1	73	64.851	ENSAPEG00000005829	cmss1	70	64.851	Amphiprion_percula
ENSCAFG00000009230	CMSS1	82	60.965	ENSATEG00000008209	cmss1	83	60.166	Anabas_testudineus
ENSCAFG00000009230	CMSS1	83	68.696	ENSAPLG00000010542	CMSS1	100	68.696	Anas_platyrhynchos
ENSCAFG00000009230	CMSS1	93	62.879	ENSACAG00000011065	CMSS1	97	62.879	Anolis_carolinensis
ENSCAFG00000009230	CMSS1	95	90.458	ENSANAG00000023565	CMSS1	100	90.458	Aotus_nancymaae
ENSCAFG00000009230	CMSS1	73	61.881	ENSACLG00000027294	cmss1	83	56.198	Astatotilapia_calliptera
ENSCAFG00000009230	CMSS1	72	55.000	ENSAMXG00000002046	cmss1	82	53.279	Astyanax_mexicanus
ENSCAFG00000009230	CMSS1	100	89.493	ENSBTAG00000013663	CMSS1	100	89.493	Bos_taurus
ENSCAFG00000009230	CMSS1	95	89.695	ENSCJAG00000000610	CMSS1	100	89.695	Callithrix_jacchus
ENSCAFG00000009230	CMSS1	84	91.379	ENSCAFG00020024156	-	72	91.379	Canis_lupus_dingo
ENSCAFG00000009230	CMSS1	94	98.846	ENSCAFG00020009464	-	95	98.846	Canis_lupus_dingo
ENSCAFG00000009230	CMSS1	100	89.855	ENSCHIG00000013003	CMSS1	100	89.855	Capra_hircus
ENSCAFG00000009230	CMSS1	100	89.130	ENSTSYG00000009266	CMSS1	100	89.130	Carlito_syrichta
ENSCAFG00000009230	CMSS1	81	72.052	ENSCAPG00000013584	CMSS1	100	71.616	Cavia_aperea
ENSCAFG00000009230	CMSS1	96	85.874	ENSCPOG00000014680	CMSS1	96	85.874	Cavia_porcellus
ENSCAFG00000009230	CMSS1	95	91.221	ENSCCAG00000034685	CMSS1	100	91.221	Cebus_capucinus
ENSCAFG00000009230	CMSS1	95	90.421	ENSCATG00000031980	CMSS1	100	90.421	Cercocebus_atys
ENSCAFG00000009230	CMSS1	83	93.886	ENSCLAG00000011241	CMSS1	98	93.886	Chinchilla_lanigera
ENSCAFG00000009230	CMSS1	89	91.429	ENSCSAG00000006024	CMSS1	100	91.429	Chlorocebus_sabaeus
ENSCAFG00000009230	CMSS1	94	72.201	ENSCHOG00000012098	CMSS1	94	72.201	Choloepus_hoffmanni
ENSCAFG00000009230	CMSS1	71	40.201	ENSCING00000014848	-	99	41.176	Ciona_intestinalis
ENSCAFG00000009230	CMSS1	94	90.734	ENSCANG00000031337	CMSS1	99	90.734	Colobus_angolensis_palliatus
ENSCAFG00000009230	CMSS1	93	82.558	ENSCGRG00001014305	Cmss1	93	82.558	Cricetulus_griseus_chok1gshd
ENSCAFG00000009230	CMSS1	93	83.203	ENSCGRG00000006722	Cmss1	99	83.203	Cricetulus_griseus_crigri
ENSCAFG00000009230	CMSS1	73	63.861	ENSCSEG00000004958	cmss1	69	63.861	Cynoglossus_semilaevis
ENSCAFG00000009230	CMSS1	73	61.881	ENSCVAG00000005039	cmss1	94	53.285	Cyprinodon_variegatus
ENSCAFG00000009230	CMSS1	73	54.950	ENSDARG00000112579	cmss1	84	50.407	Danio_rerio
ENSCAFG00000009230	CMSS1	95	88.550	ENSDNOG00000040418	CMSS1	93	88.550	Dasypus_novemcinctus
ENSCAFG00000009230	CMSS1	93	88.760	ENSDORG00000010461	Cmss1	92	88.760	Dipodomys_ordii
ENSCAFG00000009230	CMSS1	100	79.856	ENSEASG00005010966	CMSS1	99	93.151	Equus_asinus_asinus
ENSCAFG00000009230	CMSS1	94	89.961	ENSECAG00000015662	CMSS1	99	91.593	Equus_caballus
ENSCAFG00000009230	CMSS1	83	60.965	ENSEEUG00000007624	-	82	60.965	Erinaceus_europaeus
ENSCAFG00000009230	CMSS1	87	58.750	ENSELUG00000019459	cmss1	80	58.750	Esox_lucius
ENSCAFG00000009230	CMSS1	93	96.512	ENSFCAG00000044577	CMSS1	92	96.512	Felis_catus
ENSCAFG00000009230	CMSS1	86	63.713	ENSFALG00000005816	CMSS1	100	63.713	Ficedula_albicollis
ENSCAFG00000009230	CMSS1	83	92.105	ENSFDAG00000012577	CMSS1	100	92.105	Fukomys_damarensis
ENSCAFG00000009230	CMSS1	82	61.039	ENSFHEG00000012008	cmss1	95	61.039	Fundulus_heteroclitus
ENSCAFG00000009230	CMSS1	73	62.376	ENSGMOG00000016729	cmss1	72	62.376	Gadus_morhua
ENSCAFG00000009230	CMSS1	94	63.740	ENSGALG00000015267	CMSS1	100	63.985	Gallus_gallus
ENSCAFG00000009230	CMSS1	75	62.802	ENSGAFG00000021217	cmss1	77	62.871	Gambusia_affinis
ENSCAFG00000009230	CMSS1	73	57.426	ENSGACG00000002798	cmss1	97	49.815	Gasterosteus_aculeatus
ENSCAFG00000009230	CMSS1	86	70.886	ENSGAGG00000019861	CMSS1	92	70.886	Gopherus_agassizii
ENSCAFG00000009230	CMSS1	95	90.421	ENSGGOG00000014125	CMSS1	100	90.421	Gorilla_gorilla
ENSCAFG00000009230	CMSS1	73	61.881	ENSHBUG00000008431	cmss1	85	56.017	Haplochromis_burtoni
ENSCAFG00000009230	CMSS1	92	87.352	ENSHGLG00000019481	CMSS1	100	87.352	Heterocephalus_glaber_female
ENSCAFG00000009230	CMSS1	93	87.160	ENSHGLG00100010314	CMSS1	100	87.160	Heterocephalus_glaber_male
ENSCAFG00000009230	CMSS1	79	65.297	ENSHCOG00000003222	cmss1	74	65.297	Hippocampus_comes
ENSCAFG00000009230	CMSS1	80	56.364	ENSIPUG00000011591	cmss1	76	56.364	Ictalurus_punctatus
ENSCAFG00000009230	CMSS1	93	92.636	ENSSTOG00000019366	CMSS1	92	92.636	Ictidomys_tridecemlineatus
ENSCAFG00000009230	CMSS1	93	86.381	ENSJJAG00000014894	Cmss1	90	92.574	Jaculus_jaculus
ENSCAFG00000009230	CMSS1	73	55.446	ENSKMAG00000002390	cmss1	81	55.446	Kryptolebias_marmoratus
ENSCAFG00000009230	CMSS1	73	59.606	ENSLBEG00000006298	cmss1	83	59.606	Labrus_bergylta
ENSCAFG00000009230	CMSS1	83	65.652	ENSLACG00000009293	CMSS1	100	65.652	Latimeria_chalumnae
ENSCAFG00000009230	CMSS1	82	57.709	ENSLOCG00000009391	cmss1	95	51.648	Lepisosteus_oculatus
ENSCAFG00000009230	CMSS1	83	91.667	ENSLAFG00000017509	CMSS1	100	91.667	Loxodonta_africana
ENSCAFG00000009230	CMSS1	95	90.805	ENSMFAG00000045006	CMSS1	100	90.805	Macaca_fascicularis
ENSCAFG00000009230	CMSS1	95	90.421	ENSMMUG00000002939	CMSS1	100	90.421	Macaca_mulatta
ENSCAFG00000009230	CMSS1	95	90.421	ENSMNEG00000031315	CMSS1	100	90.421	Macaca_nemestrina
ENSCAFG00000009230	CMSS1	95	90.038	ENSMLEG00000033660	CMSS1	100	90.038	Mandrillus_leucophaeus
ENSCAFG00000009230	CMSS1	73	64.356	ENSMAMG00000017176	cmss1	83	58.506	Mastacembelus_armatus
ENSCAFG00000009230	CMSS1	73	61.881	ENSMZEG00005021886	cmss1	83	56.198	Maylandia_zebra
ENSCAFG00000009230	CMSS1	83	67.982	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSCAFG00000009230	CMSS1	97	58.303	ENSMAUG00000020609	Cmss1	95	58.303	Mesocricetus_auratus
ENSCAFG00000009230	CMSS1	93	92.248	ENSMICG00000048977	CMSS1	99	92.248	Microcebus_murinus
ENSCAFG00000009230	CMSS1	93	82.946	ENSMOCG00000021937	Cmss1	93	82.946	Microtus_ochrogaster
ENSCAFG00000009230	CMSS1	73	61.881	ENSMMOG00000019794	cmss1	84	61.881	Mola_mola
ENSCAFG00000009230	CMSS1	92	76.772	ENSMODG00000002275	CMSS1	95	76.772	Monodelphis_domestica
ENSCAFG00000009230	CMSS1	87	59.016	ENSMALG00000004250	cmss1	69	65.347	Monopterus_albus
ENSCAFG00000009230	CMSS1	93	82.625	MGP_CAROLIEiJ_G0020824	Cmss1	93	82.625	Mus_caroli
ENSCAFG00000009230	CMSS1	93	83.784	ENSMUSG00000022748	Cmss1	93	83.784	Mus_musculus
ENSCAFG00000009230	CMSS1	93	82.239	MGP_PahariEiJ_G0016524	Cmss1	93	82.239	Mus_pahari
ENSCAFG00000009230	CMSS1	93	83.398	MGP_SPRETEiJ_G0021724	Cmss1	93	83.398	Mus_spretus
ENSCAFG00000009230	CMSS1	94	95.000	ENSMPUG00000011324	CMSS1	100	95.000	Mustela_putorius_furo
ENSCAFG00000009230	CMSS1	94	92.337	ENSMLUG00000001131	CMSS1	99	92.337	Myotis_lucifugus
ENSCAFG00000009230	CMSS1	94	87.645	ENSNGAG00000020316	Cmss1	93	87.645	Nannospalax_galili
ENSCAFG00000009230	CMSS1	73	61.386	ENSNBRG00000003095	cmss1	83	56.198	Neolamprologus_brichardi
ENSCAFG00000009230	CMSS1	95	91.954	ENSNLEG00000034172	CMSS1	100	91.954	Nomascus_leucogenys
ENSCAFG00000009230	CMSS1	83	66.667	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSCAFG00000009230	CMSS1	93	91.829	ENSOPRG00000002986	CMSS1	92	91.829	Ochotona_princeps
ENSCAFG00000009230	CMSS1	93	71.206	ENSODEG00000009446	-	93	71.206	Octodon_degus
ENSCAFG00000009230	CMSS1	94	76.448	ENSODEG00000001853	-	93	76.448	Octodon_degus
ENSCAFG00000009230	CMSS1	97	80.297	ENSODEG00000003558	-	96	80.297	Octodon_degus
ENSCAFG00000009230	CMSS1	93	88.372	ENSODEG00000005226	-	92	88.372	Octodon_degus
ENSCAFG00000009230	CMSS1	73	61.881	ENSONIG00000006678	cmss1	93	56.198	Oreochromis_niloticus
ENSCAFG00000009230	CMSS1	93	72.308	ENSOANG00000007529	CMSS1	100	74.249	Ornithorhynchus_anatinus
ENSCAFG00000009230	CMSS1	100	90.942	ENSOCUG00000025366	CMSS1	100	90.942	Oryctolagus_cuniculus
ENSCAFG00000009230	CMSS1	84	60.684	ENSORLG00000020340	cmss1	71	64.356	Oryzias_latipes
ENSCAFG00000009230	CMSS1	83	54.148	ENSORLG00020012235	cmss1	85	57.921	Oryzias_latipes_hni
ENSCAFG00000009230	CMSS1	73	57.921	ENSORLG00015015551	cmss1	75	57.921	Oryzias_latipes_hsok
ENSCAFG00000009230	CMSS1	73	64.851	ENSOMEG00000012555	cmss1	70	64.851	Oryzias_melastigma
ENSCAFG00000009230	CMSS1	83	93.860	ENSOGAG00000002045	CMSS1	100	93.860	Otolemur_garnettii
ENSCAFG00000009230	CMSS1	99	86.131	ENSOARG00000017899	CMSS1	94	86.131	Ovis_aries
ENSCAFG00000009230	CMSS1	95	90.421	ENSPPAG00000038515	CMSS1	96	90.769	Pan_paniscus
ENSCAFG00000009230	CMSS1	93	95.349	ENSPPRG00000016767	CMSS1	92	95.349	Panthera_pardus
ENSCAFG00000009230	CMSS1	93	94.961	ENSPTIG00000018274	CMSS1	92	94.961	Panthera_tigris_altaica
ENSCAFG00000009230	CMSS1	95	89.655	ENSPTRG00000015157	CMSS1	100	91.020	Pan_troglodytes
ENSCAFG00000009230	CMSS1	95	87.356	ENSPANG00000019980	CMSS1	99	88.372	Papio_anubis
ENSCAFG00000009230	CMSS1	82	60.870	ENSPKIG00000012609	cmss1	88	60.084	Paramormyrops_kingsleyae
ENSCAFG00000009230	CMSS1	83	72.926	ENSPSIG00000003849	CMSS1	100	72.926	Pelodiscus_sinensis
ENSCAFG00000009230	CMSS1	73	62.562	ENSPMGG00000010286	cmss1	87	62.562	Periophthalmus_magnuspinnatus
ENSCAFG00000009230	CMSS1	94	83.012	ENSPEMG00000016384	Cmss1	92	83.721	Peromyscus_maniculatus_bairdii
ENSCAFG00000009230	CMSS1	74	52.941	ENSPMAG00000001146	cmss1	99	53.465	Petromyzon_marinus
ENSCAFG00000009230	CMSS1	96	72.727	ENSPCIG00000015656	CMSS1	94	76.923	Phascolarctos_cinereus
ENSCAFG00000009230	CMSS1	73	62.376	ENSPFOG00000016849	cmss1	71	62.376	Poecilia_formosa
ENSCAFG00000009230	CMSS1	73	61.881	ENSPLAG00000008323	cmss1	71	61.881	Poecilia_latipinna
ENSCAFG00000009230	CMSS1	73	62.376	ENSPMEG00000021020	cmss1	70	62.376	Poecilia_mexicana
ENSCAFG00000009230	CMSS1	89	56.400	ENSPREG00000007618	cmss1	69	61.881	Poecilia_reticulata
ENSCAFG00000009230	CMSS1	93	90.698	ENSPPYG00000013606	CMSS1	95	90.698	Pongo_abelii
ENSCAFG00000009230	CMSS1	96	90.335	ENSPCOG00000020035	CMSS1	99	93.023	Propithecus_coquereli
ENSCAFG00000009230	CMSS1	94	79.923	ENSPVAG00000017031	CMSS1	93	79.923	Pteropus_vampyrus
ENSCAFG00000009230	CMSS1	64	63.636	ENSPNYG00000013428	cmss1	79	56.944	Pundamilia_nyererei
ENSCAFG00000009230	CMSS1	87	53.086	ENSPNAG00000007912	cmss1	82	54.321	Pygocentrus_nattereri
ENSCAFG00000009230	CMSS1	94	82.308	ENSRNOG00000027888	Cmss1	100	82.308	Rattus_norvegicus
ENSCAFG00000009230	CMSS1	95	89.272	ENSRBIG00000037931	CMSS1	100	89.272	Rhinopithecus_bieti
ENSCAFG00000009230	CMSS1	95	89.272	ENSRROG00000042910	CMSS1	100	89.272	Rhinopithecus_roxellana
ENSCAFG00000009230	CMSS1	94	91.154	ENSSBOG00000030980	CMSS1	99	91.154	Saimiri_boliviensis_boliviensis
ENSCAFG00000009230	CMSS1	90	75.000	ENSSHAG00000009321	CMSS1	99	75.000	Sarcophilus_harrisii
ENSCAFG00000009230	CMSS1	82	60.435	ENSSFOG00015001509	cmss1	83	60.000	Scleropages_formosus
ENSCAFG00000009230	CMSS1	73	64.851	ENSSMAG00000001653	cmss1	69	64.851	Scophthalmus_maximus
ENSCAFG00000009230	CMSS1	82	60.262	ENSSDUG00000007719	cmss1	90	57.088	Seriola_dumerili
ENSCAFG00000009230	CMSS1	75	64.734	ENSSLDG00000012300	cmss1	88	55.189	Seriola_lalandi_dorsalis
ENSCAFG00000009230	CMSS1	97	72.659	ENSSARG00000003584	CMSS1	95	72.659	Sorex_araneus
ENSCAFG00000009230	CMSS1	82	70.796	ENSSPUG00000003865	CMSS1	100	70.796	Sphenodon_punctatus
ENSCAFG00000009230	CMSS1	75	64.563	ENSSPAG00000019182	cmss1	63	64.851	Stegastes_partitus
ENSCAFG00000009230	CMSS1	93	93.798	ENSSSCG00000011970	CMSS1	92	93.798	Sus_scrofa
ENSCAFG00000009230	CMSS1	83	65.502	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSCAFG00000009230	CMSS1	73	62.376	ENSTRUG00000015265	cmss1	72	62.376	Takifugu_rubripes
ENSCAFG00000009230	CMSS1	73	55.446	ENSTNIG00000002880	cmss1	73	55.446	Tetraodon_nigroviridis
ENSCAFG00000009230	CMSS1	83	69.737	ENSTBEG00000016722	CMSS1	81	69.737	Tupaia_belangeri
ENSCAFG00000009230	CMSS1	93	89.922	ENSTTRG00000001562	CMSS1	92	89.922	Tursiops_truncatus
ENSCAFG00000009230	CMSS1	94	94.595	ENSUAMG00000024209	CMSS1	100	96.861	Ursus_americanus
ENSCAFG00000009230	CMSS1	100	93.841	ENSUMAG00000001983	CMSS1	100	93.841	Ursus_maritimus
ENSCAFG00000009230	CMSS1	83	77.632	ENSVPAG00000000263	CMSS1	82	77.632	Vicugna_pacos
ENSCAFG00000009230	CMSS1	89	99.187	ENSVVUG00000021647	-	100	99.187	Vulpes_vulpes
ENSCAFG00000009230	CMSS1	82	96.903	ENSVVUG00000007776	-	89	96.903	Vulpes_vulpes
ENSCAFG00000009230	CMSS1	98	56.044	ENSXETG00000011858	cmss1	93	56.044	Xenopus_tropicalis
ENSCAFG00000009230	CMSS1	75	62.019	ENSXCOG00000018724	cmss1	69	62.376	Xiphophorus_couchianus
ENSCAFG00000009230	CMSS1	75	62.019	ENSXMAG00000011243	cmss1	76	62.376	Xiphophorus_maculatus