EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000009236 (Gene tree)
Gene ID: 477230
Gene Symbol: CHD6
Alias: -
Full Name: chromodomain helicase DNA binding protein 6
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 204718 bases
Position: chr24:29396480-29601197
Accession: 39204
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000039028	ResIII	PF04851.15	6.8e-08	1	1
ENSCAFP00000013610	ResIII	PF04851.15	6.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000048852	-	11542	XM_005635070	ENSCAFP00000039028	2715 (aa)	XP_005635127	J9P0F6
ENSCAFT00000014716	-	8148	-	ENSCAFP00000013610	2715 (aa)	-	F1PTH3

Gene Model

Click here to download ENSCAFG00000009236's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009236's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000009236	CHD6	79	62.620	ENSCAFG00000009699	CHD9	68	63.976
ENSCAFG00000009236	CHD6	73	69.181	ENSCAFG00000007167	CHD7	71	66.143
ENSCAFG00000009236	CHD6	59	63.168	ENSCAFG00000005626	CHD8	73	63.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000009236	CHD6	100	91.621	ENSG00000124177	CHD6	99	99.660	Homo_sapiens
ENSCAFG00000009236	CHD6	72	75.165	ENSAPOG00000013736	chd6	67	72.330	Acanthochromis_polyacanthus
ENSCAFG00000009236	CHD6	100	96.283	ENSAMEG00000009496	CHD6	100	96.283	Ailuropoda_melanoleuca
ENSCAFG00000009236	CHD6	74	76.035	ENSATEG00000005608	chd6	67	71.280	Anabas_testudineus
ENSCAFG00000009236	CHD6	99	71.877	ENSAPLG00000015592	CHD6	100	72.797	Anas_platyrhynchos
ENSCAFG00000009236	CHD6	99	67.311	ENSACAG00000006842	CHD6	99	67.929	Anolis_carolinensis
ENSCAFG00000009236	CHD6	100	91.106	ENSANAG00000037548	CHD6	99	93.394	Aotus_nancymaae
ENSCAFG00000009236	CHD6	76	73.995	ENSAMXG00000009576	chd6	77	69.958	Astyanax_mexicanus
ENSCAFG00000009236	CHD6	100	89.636	ENSBTAG00000005733	CHD6	100	89.342	Bos_taurus
ENSCAFG00000009236	CHD6	100	91.213	ENSCJAG00000017920	CHD6	99	93.211	Callithrix_jacchus
ENSCAFG00000009236	CHD6	99	99.297	ENSCAFG00020012906	CHD6	100	99.183	Canis_lupus_dingo
ENSCAFG00000009236	CHD6	100	89.820	ENSCHIG00000017606	CHD6	100	89.489	Capra_hircus
ENSCAFG00000009236	CHD6	84	90.403	ENSTSYG00000014635	CHD6	100	90.403	Carlito_syrichta
ENSCAFG00000009236	CHD6	100	90.401	ENSCPOG00000015641	CHD6	100	90.401	Cavia_porcellus
ENSCAFG00000009236	CHD6	100	91.474	ENSCCAG00000036828	CHD6	99	93.394	Cebus_capucinus
ENSCAFG00000009236	CHD6	100	91.216	ENSCATG00000039248	CHD6	99	93.394	Cercocebus_atys
ENSCAFG00000009236	CHD6	100	90.128	ENSCLAG00000013743	CHD6	100	90.202	Chinchilla_lanigera
ENSCAFG00000009236	CHD6	100	91.510	ENSCSAG00000013997	CHD6	100	91.510	Chlorocebus_sabaeus
ENSCAFG00000009236	CHD6	91	90.184	ENSCHOG00000012647	CHD6	95	90.184	Choloepus_hoffmanni
ENSCAFG00000009236	CHD6	99	73.760	ENSCPBG00000019382	CHD6	99	74.054	Chrysemys_picta_bellii
ENSCAFG00000009236	CHD6	100	91.581	ENSCANG00000043435	CHD6	99	93.394	Colobus_angolensis_palliatus
ENSCAFG00000009236	CHD6	100	88.595	ENSCGRG00001002694	Chd6	100	88.668	Cricetulus_griseus_chok1gshd
ENSCAFG00000009236	CHD6	84	72.770	ENSDARG00000017244	chd6	80	72.770	Danio_rerio
ENSCAFG00000009236	CHD6	99	90.077	ENSDNOG00000004176	CHD6	99	90.077	Dasypus_novemcinctus
ENSCAFG00000009236	CHD6	99	93.242	ENSEASG00005023433	CHD6	95	97.683	Equus_asinus_asinus
ENSCAFG00000009236	CHD6	99	93.964	ENSECAG00000011761	CHD6	100	93.964	Equus_caballus
ENSCAFG00000009236	CHD6	65	80.108	ENSELUG00000012309	chd6	92	80.108	Esox_lucius
ENSCAFG00000009236	CHD6	100	95.399	ENSFCAG00000003572	CHD6	100	95.399	Felis_catus
ENSCAFG00000009236	CHD6	99	71.636	ENSFALG00000012563	CHD6	98	71.418	Ficedula_albicollis
ENSCAFG00000009236	CHD6	99	90.251	ENSFDAG00000013791	CHD6	99	90.325	Fukomys_damarensis
ENSCAFG00000009236	CHD6	73	69.335	ENSGMOG00000011715	chd6	86	69.478	Gadus_morhua
ENSCAFG00000009236	CHD6	78	70.746	ENSGACG00000000037	chd6	92	64.342	Gasterosteus_aculeatus
ENSCAFG00000009236	CHD6	100	91.657	ENSGGOG00000013123	CHD6	99	93.394	Gorilla_gorilla
ENSCAFG00000009236	CHD6	78	72.153	ENSHBUG00000014701	chd6	70	68.421	Haplochromis_burtoni
ENSCAFG00000009236	CHD6	100	90.257	ENSHGLG00000004548	CHD6	100	90.294	Heterocephalus_glaber_female
ENSCAFG00000009236	CHD6	100	90.257	ENSHGLG00100006401	CHD6	100	90.294	Heterocephalus_glaber_male
ENSCAFG00000009236	CHD6	78	75.656	ENSIPUG00000003692	chd6	75	76.845	Ictalurus_punctatus
ENSCAFG00000009236	CHD6	100	90.989	ENSSTOG00000013382	CHD6	100	91.063	Ictidomys_tridecemlineatus
ENSCAFG00000009236	CHD6	90	74.596	ENSLACG00000010881	CHD6	89	74.652	Latimeria_chalumnae
ENSCAFG00000009236	CHD6	73	80.299	ENSLOCG00000007386	chd6	83	75.725	Lepisosteus_oculatus
ENSCAFG00000009236	CHD6	100	91.210	ENSLAFG00000012144	CHD6	100	91.324	Loxodonta_africana
ENSCAFG00000009236	CHD6	100	91.584	ENSMFAG00000032830	CHD6	99	93.394	Macaca_fascicularis
ENSCAFG00000009236	CHD6	100	91.584	ENSMMUG00000020458	CHD6	99	93.394	Macaca_mulatta
ENSCAFG00000009236	CHD6	100	91.584	ENSMNEG00000040847	CHD6	99	93.394	Macaca_nemestrina
ENSCAFG00000009236	CHD6	100	91.260	ENSMLEG00000031965	CHD6	99	93.394	Mandrillus_leucophaeus
ENSCAFG00000009236	CHD6	74	73.704	ENSMAMG00000013111	chd6	65	73.896	Mastacembelus_armatus
ENSCAFG00000009236	CHD6	99	71.376	ENSMGAG00000001121	CHD6	100	72.206	Meleagris_gallopavo
ENSCAFG00000009236	CHD6	100	91.425	ENSMICG00000016641	CHD6	99	92.661	Microcebus_murinus
ENSCAFG00000009236	CHD6	89	81.000	ENSMODG00000000720	-	99	81.000	Monodelphis_domestica
ENSCAFG00000009236	CHD6	100	87.233	MGP_CAROLIEiJ_G0024604	Chd6	100	94.262	Mus_caroli
ENSCAFG00000009236	CHD6	100	87.380	ENSMUSG00000057133	Chd6	100	94.177	Mus_musculus
ENSCAFG00000009236	CHD6	100	87.160	MGP_PahariEiJ_G0026048	Chd6	100	94.599	Mus_pahari
ENSCAFG00000009236	CHD6	100	87.344	MGP_SPRETEiJ_G0025526	Chd6	100	94.262	Mus_spretus
ENSCAFG00000009236	CHD6	100	95.117	ENSMPUG00000017695	CHD6	100	95.117	Mustela_putorius_furo
ENSCAFG00000009236	CHD6	100	92.350	ENSMLUG00000016247	CHD6	100	92.350	Myotis_lucifugus
ENSCAFG00000009236	CHD6	78	73.368	ENSNBRG00000013839	chd6	79	73.499	Neolamprologus_brichardi
ENSCAFG00000009236	CHD6	100	90.007	ENSNLEG00000006496	CHD6	100	90.118	Nomascus_leucogenys
ENSCAFG00000009236	CHD6	100	87.017	ENSOPRG00000013376	-	100	87.017	Ochotona_princeps
ENSCAFG00000009236	CHD6	83	74.872	ENSONIG00000000393	chd6	85	74.872	Oreochromis_niloticus
ENSCAFG00000009236	CHD6	100	70.575	ENSOANG00000014347	CHD6	99	70.856	Ornithorhynchus_anatinus
ENSCAFG00000009236	CHD6	99	89.474	ENSOCUG00000012394	CHD6	100	89.474	Oryctolagus_cuniculus
ENSCAFG00000009236	CHD6	79	69.982	ENSORLG00020021891	chd6	95	86.172	Oryzias_latipes_hni
ENSCAFG00000009236	CHD6	99	90.048	ENSOGAG00000002427	CHD6	99	89.948	Otolemur_garnettii
ENSCAFG00000009236	CHD6	99	87.422	ENSOARG00000002597	CHD6	100	87.495	Ovis_aries
ENSCAFG00000009236	CHD6	100	95.547	ENSPPRG00000014756	CHD6	100	95.547	Panthera_pardus
ENSCAFG00000009236	CHD6	100	95.436	ENSPTIG00000011094	CHD6	100	95.436	Panthera_tigris_altaica
ENSCAFG00000009236	CHD6	100	91.694	ENSPTRG00000013504	CHD6	99	93.394	Pan_troglodytes
ENSCAFG00000009236	CHD6	100	91.584	ENSPANG00000025554	CHD6	99	93.211	Papio_anubis
ENSCAFG00000009236	CHD6	76	76.800	ENSPKIG00000005578	chd6	79	72.898	Paramormyrops_kingsleyae
ENSCAFG00000009236	CHD6	76	76.349	ENSPMGG00000014877	chd6	88	75.275	Periophthalmus_magnuspinnatus
ENSCAFG00000009236	CHD6	100	80.183	ENSPCIG00000028037	CHD6	100	80.587	Phascolarctos_cinereus
ENSCAFG00000009236	CHD6	74	70.663	ENSPLAG00000003128	chd6	65	71.875	Poecilia_latipinna
ENSCAFG00000009236	CHD6	70	73.124	ENSPREG00000022653	chd6	99	86.630	Poecilia_reticulata
ENSCAFG00000009236	CHD6	100	91.734	ENSPPYG00000011016	CHD6	100	91.807	Pongo_abelii
ENSCAFG00000009236	CHD6	99	91.679	ENSPCOG00000001089	CHD6	99	93.211	Propithecus_coquereli
ENSCAFG00000009236	CHD6	78	75.016	ENSPNYG00000022516	chd6	78	74.789	Pundamilia_nyererei
ENSCAFG00000009236	CHD6	82	70.624	ENSPNAG00000012825	chd6	79	71.170	Pygocentrus_nattereri
ENSCAFG00000009236	CHD6	100	86.865	ENSRNOG00000016744	Chd6	100	86.792	Rattus_norvegicus
ENSCAFG00000009236	CHD6	100	91.437	ENSSBOG00000022089	CHD6	99	93.394	Saimiri_boliviensis_boliviensis
ENSCAFG00000009236	CHD6	99	79.794	ENSSHAG00000017072	CHD6	99	80.198	Sarcophilus_harrisii
ENSCAFG00000009236	CHD6	80	75.911	ENSSFOG00015012920	chd6	81	72.904	Scleropages_formosus
ENSCAFG00000009236	CHD6	59	100.000	ENSSARG00000002615	-	61	100.000	Sorex_araneus
ENSCAFG00000009236	CHD6	100	91.982	ENSSSCG00000007360	CHD6	100	92.660	Sus_scrofa
ENSCAFG00000009236	CHD6	97	73.908	ENSTGUG00000003179	CHD6	99	73.642	Taeniopygia_guttata
ENSCAFG00000009236	CHD6	51	77.373	ENSTNIG00000017487	chd6	64	70.206	Tetraodon_nigroviridis
ENSCAFG00000009236	CHD6	100	89.228	ENSTTRG00000013438	CHD6	100	89.228	Tursiops_truncatus
ENSCAFG00000009236	CHD6	100	94.224	ENSUAMG00000024036	CHD6	99	95.199	Ursus_americanus
ENSCAFG00000009236	CHD6	99	96.638	ENSUMAG00000002017	CHD6	99	96.638	Ursus_maritimus
ENSCAFG00000009236	CHD6	92	92.417	ENSVPAG00000007941	CHD6	93	92.417	Vicugna_pacos
ENSCAFG00000009236	CHD6	100	99.521	ENSVVUG00000029164	CHD6	100	99.521	Vulpes_vulpes
ENSCAFG00000009236	CHD6	94	68.926	ENSXETG00000021445	chd6	91	68.750	Xenopus_tropicalis