EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000009289 (Gene tree)
Gene ID: 403667
Gene Symbol: SRSF6
Alias: -
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 3183 bases
Position: chr24:31217126-31220308
Accession: 54735
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000013652	RRM_1	PF00076.22	6.2e-33	1	2
ENSCAFP00000013652	RRM_1	PF00076.22	6.2e-33	2	2
ENSCAFP00000042621	RRM_1	PF00076.22	1.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000044157	-	537	XM_005635077	ENSCAFP00000042621	135 (aa)	XP_005635134	J9PA38
ENSCAFT00000014759	-	1035	XM_003639860	ENSCAFP00000013652	344 (aa)	XP_003639908	F1PTE0

Gene Model

Click here to download ENSCAFG00000009289's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03040	Spliceosome	KEGG
cfa05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009289's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000009289	SRSF6	58	41.148	ENSCAFG00000017430	SRSF1	76	42.584
ENSCAFG00000009289	SRSF6	50	73.134	ENSCAFG00000016589	SRSF5	66	64.674
ENSCAFG00000009289	SRSF6	61	45.455	ENSCAFG00000010314	SRSF9	71	41.714

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000009289	SRSF6	100	99.259	ENSG00000124193	SRSF6	100	99.259	Homo_sapiens
ENSCAFG00000009289	SRSF6	58	94.872	ENSAPOG00000016635	-	84	83.088	Acanthochromis_polyacanthus
ENSCAFG00000009289	SRSF6	94	88.272	ENSAMEG00000003710	SRSF6	94	88.272	Ailuropoda_melanoleuca
ENSCAFG00000009289	SRSF6	63	88.235	ENSACIG00000020091	-	95	81.102	Amphilophus_citrinellus
ENSCAFG00000009289	SRSF6	92	68.702	ENSAOCG00000019438	-	98	68.702	Amphiprion_ocellaris
ENSCAFG00000009289	SRSF6	65	84.091	ENSAOCG00000004309	-	57	83.696	Amphiprion_ocellaris
ENSCAFG00000009289	SRSF6	63	85.882	ENSAPEG00000020746	-	66	80.319	Amphiprion_percula
ENSCAFG00000009289	SRSF6	98	62.590	ENSAPEG00000013086	-	53	88.172	Amphiprion_percula
ENSCAFG00000009289	SRSF6	66	84.270	ENSATEG00000007255	-	71	80.541	Anabas_testudineus
ENSCAFG00000009289	SRSF6	94	80.000	ENSACAG00000002061	SRSF6	92	83.230	Anolis_carolinensis
ENSCAFG00000009289	SRSF6	100	99.259	ENSANAG00000024080	SRSF6	100	99.259	Aotus_nancymaae
ENSCAFG00000009289	SRSF6	54	90.411	ENSACLG00000024373	-	96	80.645	Astatotilapia_calliptera
ENSCAFG00000009289	SRSF6	55	91.892	ENSAMXG00000003101	-	51	84.737	Astyanax_mexicanus
ENSCAFG00000009289	SRSF6	55	93.243	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSCAFG00000009289	SRSF6	100	100.000	ENSBTAG00000008527	SRSF6	100	100.000	Bos_taurus
ENSCAFG00000009289	SRSF6	100	99.259	ENSCJAG00000048403	SRSF6	100	99.259	Callithrix_jacchus
ENSCAFG00000009289	SRSF6	100	100.000	ENSCAFG00020013559	SRSF6	100	100.000	Canis_lupus_dingo
ENSCAFG00000009289	SRSF6	100	99.130	ENSCHIG00000009148	-	100	99.130	Capra_hircus
ENSCAFG00000009289	SRSF6	100	100.000	ENSCHIG00000015890	-	100	100.000	Capra_hircus
ENSCAFG00000009289	SRSF6	100	83.188	ENSTSYG00000026476	SRSF6	100	83.188	Carlito_syrichta
ENSCAFG00000009289	SRSF6	100	99.259	ENSCPOG00000011761	SRSF6	100	99.259	Cavia_porcellus
ENSCAFG00000009289	SRSF6	100	99.259	ENSCCAG00000026018	-	100	99.259	Cebus_capucinus
ENSCAFG00000009289	SRSF6	67	76.923	ENSCCAG00000018540	-	62	86.702	Cebus_capucinus
ENSCAFG00000009289	SRSF6	100	99.259	ENSCATG00000030794	SRSF6	100	99.259	Cercocebus_atys
ENSCAFG00000009289	SRSF6	100	99.259	ENSCLAG00000010247	SRSF6	100	99.259	Chinchilla_lanigera
ENSCAFG00000009289	SRSF6	100	97.391	ENSCSAG00000014022	SRSF6	100	97.391	Chlorocebus_sabaeus
ENSCAFG00000009289	SRSF6	100	82.609	ENSCHOG00000000561	SRSF6	100	82.609	Choloepus_hoffmanni
ENSCAFG00000009289	SRSF6	58	96.154	ENSCPBG00000018200	SRSF6	94	84.969	Chrysemys_picta_bellii
ENSCAFG00000009289	SRSF6	100	97.101	ENSCANG00000037774	-	100	97.101	Colobus_angolensis_palliatus
ENSCAFG00000009289	SRSF6	100	82.899	ENSCANG00000042529	-	100	82.899	Colobus_angolensis_palliatus
ENSCAFG00000009289	SRSF6	100	99.259	ENSCGRG00001022339	Srsf6	100	99.259	Cricetulus_griseus_chok1gshd
ENSCAFG00000009289	SRSF6	63	94.419	ENSCGRG00000006618	Srsf6	100	94.419	Cricetulus_griseus_crigri
ENSCAFG00000009289	SRSF6	58	94.872	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSCAFG00000009289	SRSF6	58	93.590	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSCAFG00000009289	SRSF6	55	91.892	ENSDARG00000016783	srsf6b	87	90.361	Danio_rerio
ENSCAFG00000009289	SRSF6	94	95.988	ENSDNOG00000008410	SRSF6	94	95.988	Dasypus_novemcinctus
ENSCAFG00000009289	SRSF6	100	99.259	ENSDORG00000028378	Srsf6	100	99.259	Dipodomys_ordii
ENSCAFG00000009289	SRSF6	93	93.438	ENSETEG00000006221	SRSF6	94	91.049	Echinops_telfairi
ENSCAFG00000009289	SRSF6	100	98.841	ENSEASG00005023429	SRSF6	100	98.841	Equus_asinus_asinus
ENSCAFG00000009289	SRSF6	100	98.841	ENSECAG00000023932	SRSF6	100	98.841	Equus_caballus
ENSCAFG00000009289	SRSF6	56	94.872	ENSEEUG00000002324	SRSF6	90	94.924	Erinaceus_europaeus
ENSCAFG00000009289	SRSF6	92	63.323	ENSELUG00000013506	SRSF6	88	78.788	Esox_lucius
ENSCAFG00000009289	SRSF6	98	60.000	ENSELUG00000024182	SRSF6	85	88.506	Esox_lucius
ENSCAFG00000009289	SRSF6	100	100.000	ENSFCAG00000032814	SRSF6	100	100.000	Felis_catus
ENSCAFG00000009289	SRSF6	94	80.556	ENSFDAG00000012191	SRSF6	93	78.086	Fukomys_damarensis
ENSCAFG00000009289	SRSF6	87	70.957	ENSFHEG00000023065	srsf6a	55	87.500	Fundulus_heteroclitus
ENSCAFG00000009289	SRSF6	56	89.474	ENSGMOG00000014458	srsf6a	52	77.604	Gadus_morhua
ENSCAFG00000009289	SRSF6	61	78.049	ENSGMOG00000006105	srsf6a	62	70.950	Gadus_morhua
ENSCAFG00000009289	SRSF6	100	96.296	ENSGALG00000000990	SRSF6	100	96.296	Gallus_gallus
ENSCAFG00000009289	SRSF6	58	93.590	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSCAFG00000009289	SRSF6	98	61.940	ENSGACG00000006084	srsf6a	61	76.744	Gasterosteus_aculeatus
ENSCAFG00000009289	SRSF6	58	96.154	ENSGAGG00000003238	SRSF6	94	84.969	Gopherus_agassizii
ENSCAFG00000009289	SRSF6	100	99.259	ENSGGOG00000009808	SRSF6	100	99.259	Gorilla_gorilla
ENSCAFG00000009289	SRSF6	56	90.789	ENSHBUG00000006386	-	58	84.239	Haplochromis_burtoni
ENSCAFG00000009289	SRSF6	90	76.206	ENSHGLG00000007701	-	58	78.075	Heterocephalus_glaber_female
ENSCAFG00000009289	SRSF6	100	99.259	ENSHGLG00000007348	SRSF6	100	99.259	Heterocephalus_glaber_female
ENSCAFG00000009289	SRSF6	94	80.864	ENSHGLG00100005043	SRSF6	93	78.395	Heterocephalus_glaber_male
ENSCAFG00000009289	SRSF6	58	88.462	ENSHCOG00000002740	srsf6a	57	82.065	Hippocampus_comes
ENSCAFG00000009289	SRSF6	58	93.590	ENSIPUG00000004776	-	76	68.033	Ictalurus_punctatus
ENSCAFG00000009289	SRSF6	100	99.259	ENSSTOG00000010866	SRSF6	100	99.259	Ictidomys_tridecemlineatus
ENSCAFG00000009289	SRSF6	87	66.000	ENSKMAG00000011934	srsf6a	59	85.870	Kryptolebias_marmoratus
ENSCAFG00000009289	SRSF6	58	93.590	ENSLBEG00000007356	srsf6a	52	85.484	Labrus_bergylta
ENSCAFG00000009289	SRSF6	90	81.731	ENSLACG00000005466	SRSF6	54	91.848	Latimeria_chalumnae
ENSCAFG00000009289	SRSF6	69	96.234	ENSLAFG00000006682	SRSF6	89	96.507	Loxodonta_africana
ENSCAFG00000009289	SRSF6	100	99.259	ENSMFAG00000036925	SRSF6	100	99.259	Macaca_fascicularis
ENSCAFG00000009289	SRSF6	100	99.259	ENSMMUG00000006742	SRSF6	100	99.259	Macaca_mulatta
ENSCAFG00000009289	SRSF6	100	97.778	ENSMNEG00000027392	-	100	97.778	Macaca_nemestrina
ENSCAFG00000009289	SRSF6	100	95.942	ENSMNEG00000038270	-	100	95.942	Macaca_nemestrina
ENSCAFG00000009289	SRSF6	63	96.759	ENSMLEG00000031524	SRSF6	100	96.759	Mandrillus_leucophaeus
ENSCAFG00000009289	SRSF6	63	88.235	ENSMAMG00000023477	-	89	88.235	Mastacembelus_armatus
ENSCAFG00000009289	SRSF6	98	62.590	ENSMAMG00000017161	srsf6a	53	87.634	Mastacembelus_armatus
ENSCAFG00000009289	SRSF6	56	90.789	ENSMZEG00005008032	-	57	84.239	Maylandia_zebra
ENSCAFG00000009289	SRSF6	98	59.091	ENSMZEG00005020658	-	60	82.873	Maylandia_zebra
ENSCAFG00000009289	SRSF6	100	99.259	ENSMAUG00000019086	-	100	99.259	Mesocricetus_auratus
ENSCAFG00000009289	SRSF6	100	99.259	ENSMICG00000008537	SRSF6	100	99.259	Microcebus_murinus
ENSCAFG00000009289	SRSF6	63	94.419	ENSMOCG00000018738	Srsf6	100	94.419	Microtus_ochrogaster
ENSCAFG00000009289	SRSF6	58	93.590	ENSMMOG00000015241	-	78	91.566	Mola_mola
ENSCAFG00000009289	SRSF6	58	96.154	ENSMODG00000003107	SRSF6	55	95.745	Monodelphis_domestica
ENSCAFG00000009289	SRSF6	100	99.259	MGP_CAROLIEiJ_G0024606	Srsf6	100	99.259	Mus_caroli
ENSCAFG00000009289	SRSF6	100	99.259	ENSMUSG00000016921	Srsf6	100	99.259	Mus_musculus
ENSCAFG00000009289	SRSF6	100	99.259	MGP_PahariEiJ_G0026050	Srsf6	100	99.259	Mus_pahari
ENSCAFG00000009289	SRSF6	100	99.259	MGP_SPRETEiJ_G0025528	Srsf6	100	99.259	Mus_spretus
ENSCAFG00000009289	SRSF6	83	100.000	ENSMPUG00000017692	SRSF6	99	100.000	Mustela_putorius_furo
ENSCAFG00000009289	SRSF6	93	82.609	ENSMLUG00000016618	SRSF6	94	82.716	Myotis_lucifugus
ENSCAFG00000009289	SRSF6	100	99.259	ENSNGAG00000017560	Srsf6	100	99.259	Nannospalax_galili
ENSCAFG00000009289	SRSF6	56	90.789	ENSNBRG00000014709	-	58	84.239	Neolamprologus_brichardi
ENSCAFG00000009289	SRSF6	58	94.872	ENSNBRG00000001846	-	52	87.634	Neolamprologus_brichardi
ENSCAFG00000009289	SRSF6	100	99.259	ENSNLEG00000006524	SRSF6	100	99.259	Nomascus_leucogenys
ENSCAFG00000009289	SRSF6	58	96.154	ENSMEUG00000014615	SRSF6	62	95.745	Notamacropus_eugenii
ENSCAFG00000009289	SRSF6	75	96.911	ENSOPRG00000002017	-	100	96.911	Ochotona_princeps
ENSCAFG00000009289	SRSF6	100	99.259	ENSODEG00000016510	-	100	99.259	Octodon_degus
ENSCAFG00000009289	SRSF6	58	94.872	ENSONIG00000001925	-	54	71.795	Oreochromis_niloticus
ENSCAFG00000009289	SRSF6	61	87.805	ENSONIG00000020247	-	53	84.783	Oreochromis_niloticus
ENSCAFG00000009289	SRSF6	84	80.719	ENSOCUG00000009785	-	64	76.289	Oryctolagus_cuniculus
ENSCAFG00000009289	SRSF6	67	51.092	ENSOCUG00000023999	-	70	62.570	Oryctolagus_cuniculus
ENSCAFG00000009289	SRSF6	58	93.590	ENSORLG00020017506	srsf6a	90	69.032	Oryzias_latipes_hni
ENSCAFG00000009289	SRSF6	94	97.222	ENSOGAG00000014468	SRSF6	94	97.523	Otolemur_garnettii
ENSCAFG00000009289	SRSF6	93	95.652	ENSOARG00000003117	SRSF6	94	95.679	Ovis_aries
ENSCAFG00000009289	SRSF6	100	97.110	ENSPPAG00000034327	-	100	97.110	Pan_paniscus
ENSCAFG00000009289	SRSF6	90	83.923	ENSPPAG00000043131	-	100	86.174	Pan_paniscus
ENSCAFG00000009289	SRSF6	100	100.000	ENSPPRG00000008917	SRSF6	100	100.000	Panthera_pardus
ENSCAFG00000009289	SRSF6	63	100.000	ENSPTIG00000019153	SRSF6	100	100.000	Panthera_tigris_altaica
ENSCAFG00000009289	SRSF6	100	99.259	ENSPTRG00000044686	-	100	99.259	Pan_troglodytes
ENSCAFG00000009289	SRSF6	90	83.923	ENSPTRG00000046274	-	100	86.174	Pan_troglodytes
ENSCAFG00000009289	SRSF6	100	99.259	ENSPANG00000035224	SRSF6	100	99.259	Papio_anubis
ENSCAFG00000009289	SRSF6	58	94.872	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSCAFG00000009289	SRSF6	100	67.049	ENSPKIG00000018463	-	83	90.476	Paramormyrops_kingsleyae
ENSCAFG00000009289	SRSF6	59	76.250	ENSPKIG00000015703	-	95	60.403	Paramormyrops_kingsleyae
ENSCAFG00000009289	SRSF6	89	71.845	ENSPMGG00000014963	srsf6a	55	89.130	Periophthalmus_magnuspinnatus
ENSCAFG00000009289	SRSF6	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSCAFG00000009289	SRSF6	100	97.778	ENSPCIG00000003820	SRSF6	100	97.778	Phascolarctos_cinereus
ENSCAFG00000009289	SRSF6	58	93.590	ENSPFOG00000006437	srsf6a	50	83.158	Poecilia_formosa
ENSCAFG00000009289	SRSF6	58	93.590	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSCAFG00000009289	SRSF6	58	93.590	ENSPMEG00000006042	SRSF6	54	87.027	Poecilia_mexicana
ENSCAFG00000009289	SRSF6	59	92.405	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSCAFG00000009289	SRSF6	100	97.399	ENSPPYG00000011019	SRSF6	100	97.399	Pongo_abelii
ENSCAFG00000009289	SRSF6	92	94.340	ENSPCAG00000010954	SRSF6	96	93.189	Procavia_capensis
ENSCAFG00000009289	SRSF6	100	99.259	ENSPCOG00000026364	SRSF6	100	99.259	Propithecus_coquereli
ENSCAFG00000009289	SRSF6	100	96.522	ENSPVAG00000015232	SRSF6	100	96.522	Pteropus_vampyrus
ENSCAFG00000009289	SRSF6	58	94.872	ENSPNYG00000011272	-	51	87.634	Pundamilia_nyererei
ENSCAFG00000009289	SRSF6	56	90.789	ENSPNYG00000004944	-	58	84.239	Pundamilia_nyererei
ENSCAFG00000009289	SRSF6	59	93.750	ENSPNAG00000023179	-	94	82.677	Pygocentrus_nattereri
ENSCAFG00000009289	SRSF6	94	96.285	ENSRNOG00000006380	Srsf6	95	96.605	Rattus_norvegicus
ENSCAFG00000009289	SRSF6	100	95.652	ENSRBIG00000041414	SRSF6	100	95.652	Rhinopithecus_bieti
ENSCAFG00000009289	SRSF6	100	99.259	ENSRROG00000029989	SRSF6	100	99.259	Rhinopithecus_roxellana
ENSCAFG00000009289	SRSF6	93	69.470	ENSSBOG00000034078	-	54	76.243	Saimiri_boliviensis_boliviensis
ENSCAFG00000009289	SRSF6	100	99.259	ENSSBOG00000033708	-	100	99.259	Saimiri_boliviensis_boliviensis
ENSCAFG00000009289	SRSF6	58	96.154	ENSSHAG00000012805	SRSF6	55	95.745	Sarcophilus_harrisii
ENSCAFG00000009289	SRSF6	55	94.595	ENSSFOG00015015169	SRSF6	60	89.130	Scleropages_formosus
ENSCAFG00000009289	SRSF6	89	64.881	ENSSFOG00015019681	-	53	81.959	Scleropages_formosus
ENSCAFG00000009289	SRSF6	59	91.250	ENSSMAG00000014861	-	95	67.188	Scophthalmus_maximus
ENSCAFG00000009289	SRSF6	56	89.474	ENSSMAG00000017447	-	55	80.435	Scophthalmus_maximus
ENSCAFG00000009289	SRSF6	63	88.235	ENSSDUG00000011036	-	90	88.235	Seriola_dumerili
ENSCAFG00000009289	SRSF6	98	61.871	ENSSDUG00000016097	srsf6a	53	87.634	Seriola_dumerili
ENSCAFG00000009289	SRSF6	63	88.235	ENSSLDG00000014858	-	90	88.235	Seriola_lalandi_dorsalis
ENSCAFG00000009289	SRSF6	98	62.590	ENSSLDG00000022841	srsf6a	54	87.634	Seriola_lalandi_dorsalis
ENSCAFG00000009289	SRSF6	75	98.062	ENSSARG00000001602	SRSF6	100	98.062	Sorex_araneus
ENSCAFG00000009289	SRSF6	100	96.296	ENSSPUG00000004967	SRSF6	100	96.296	Sphenodon_punctatus
ENSCAFG00000009289	SRSF6	63	85.882	ENSSPAG00000021913	-	86	85.882	Stegastes_partitus
ENSCAFG00000009289	SRSF6	98	62.590	ENSSPAG00000002362	srsf6a	67	86.243	Stegastes_partitus
ENSCAFG00000009289	SRSF6	100	98.841	ENSSSCG00000007362	SRSF6	100	98.841	Sus_scrofa
ENSCAFG00000009289	SRSF6	93	85.185	ENSTGUG00000003455	SRSF6	94	70.642	Taeniopygia_guttata
ENSCAFG00000009289	SRSF6	59	93.750	ENSTRUG00000021397	-	87	93.750	Takifugu_rubripes
ENSCAFG00000009289	SRSF6	87	70.530	ENSTNIG00000001692	srsf6a	57	86.022	Tetraodon_nigroviridis
ENSCAFG00000009289	SRSF6	85	93.151	ENSTBEG00000013448	SRSF6	92	93.471	Tupaia_belangeri
ENSCAFG00000009289	SRSF6	75	98.456	ENSTTRG00000015410	SRSF6	100	98.456	Tursiops_truncatus
ENSCAFG00000009289	SRSF6	100	100.000	ENSUAMG00000003559	SRSF6	100	100.000	Ursus_americanus
ENSCAFG00000009289	SRSF6	63	100.000	ENSUMAG00000001154	SRSF6	100	100.000	Ursus_maritimus
ENSCAFG00000009289	SRSF6	83	100.000	ENSVPAG00000003016	SRSF6	83	100.000	Vicugna_pacos
ENSCAFG00000009289	SRSF6	100	79.259	ENSVVUG00000019276	-	100	79.259	Vulpes_vulpes
ENSCAFG00000009289	SRSF6	58	93.590	ENSXMAG00000021849	srsf6a	55	86.413	Xiphophorus_maculatus