EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000009311 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: H/ACA ribonucleoprotein complex subunit 4 pseudogene
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 1524 bases
Position: chr33:7039971-7041494
Accession: 102152908
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000013709	TruB_N	PF01509.18	9e-10	1	1
ENSCAFP00000013709	PUA	PF01472.20	9.4e-15	1	1
ENSCAFP00000013709	DKCLD	PF08068.12	1.2e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000014816	-	1494	-	ENSCAFP00000013709	498 (aa)	-	E2RGN8

Gene Model

Click here to download ENSCAFG00000009311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000009311	-	97	84.064	ENSCAFG00000019620	-	97	84.032

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000009311	-	96	79.000	ENSG00000130826	DKC1	99	89.756	Homo_sapiens
ENSCAFG00000009311	-	81	74.634	ENSAPOG00000007799	dkc1	87	70.946	Acanthochromis_polyacanthus
ENSCAFG00000009311	-	93	81.953	ENSAMEG00000002776	DKC1	96	79.919	Ailuropoda_melanoleuca
ENSCAFG00000009311	-	78	77.468	ENSACIG00000022614	dkc1	89	72.685	Amphilophus_citrinellus
ENSCAFG00000009311	-	81	74.634	ENSAOCG00000013159	dkc1	89	70.843	Amphiprion_ocellaris
ENSCAFG00000009311	-	81	74.634	ENSAPEG00000002284	dkc1	89	70.909	Amphiprion_percula
ENSCAFG00000009311	-	78	75.124	ENSATEG00000013682	dkc1	88	69.778	Anabas_testudineus
ENSCAFG00000009311	-	86	75.515	ENSACAG00000015600	DKC1	74	75.515	Anolis_carolinensis
ENSCAFG00000009311	-	95	78.182	ENSANAG00000022732	DKC1	96	78.200	Aotus_nancymaae
ENSCAFG00000009311	-	78	76.709	ENSACLG00000015605	dkc1	80	76.709	Astatotilapia_calliptera
ENSCAFG00000009311	-	86	71.789	ENSAMXG00000017108	dkc1	79	76.574	Astyanax_mexicanus
ENSCAFG00000009311	-	91	82.213	ENSBTAG00000013045	DKC1	90	81.996	Bos_taurus
ENSCAFG00000009311	-	80	59.606	WBGene00010478	K01G5.5	97	57.241	Caenorhabditis_elegans
ENSCAFG00000009311	-	96	77.844	ENSCJAG00000004210	DKC1	97	78.044	Callithrix_jacchus
ENSCAFG00000009311	-	100	96.988	ENSCAFG00020009379	-	96	96.988	Canis_lupus_dingo
ENSCAFG00000009311	-	97	84.064	ENSCAFG00020008918	-	97	84.032	Canis_lupus_dingo
ENSCAFG00000009311	-	91	81.996	ENSCHIG00000017392	DKC1	90	81.779	Capra_hircus
ENSCAFG00000009311	-	86	82.883	ENSTSYG00000007681	DKC1	85	82.883	Carlito_syrichta
ENSCAFG00000009311	-	81	80.918	ENSCAPG00000003342	DKC1	91	82.836	Cavia_aperea
ENSCAFG00000009311	-	96	77.800	ENSCPOG00000008825	DKC1	84	83.641	Cavia_porcellus
ENSCAFG00000009311	-	96	69.800	ENSCCAG00000027418	DKC1	96	70.000	Cebus_capucinus
ENSCAFG00000009311	-	96	78.600	ENSCATG00000033602	DKC1	96	78.400	Cercocebus_atys
ENSCAFG00000009311	-	92	80.922	ENSCLAG00000000720	DKC1	93	80.922	Chinchilla_lanigera
ENSCAFG00000009311	-	96	78.800	ENSCSAG00000006706	DKC1	96	78.600	Chlorocebus_sabaeus
ENSCAFG00000009311	-	79	79.208	ENSCPBG00000005858	DKC1	91	77.103	Chrysemys_picta_bellii
ENSCAFG00000009311	-	84	67.056	ENSCING00000004599	-	82	66.133	Ciona_intestinalis
ENSCAFG00000009311	-	78	69.173	ENSCSAVG00000010047	-	97	65.446	Ciona_savignyi
ENSCAFG00000009311	-	96	78.800	ENSCANG00000027987	DKC1	96	78.600	Colobus_angolensis_palliatus
ENSCAFG00000009311	-	97	76.447	ENSCGRG00001014574	-	84	82.719	Cricetulus_griseus_chok1gshd
ENSCAFG00000009311	-	77	64.286	ENSCGRG00001016789	-	79	66.576	Cricetulus_griseus_chok1gshd
ENSCAFG00000009311	-	77	64.286	ENSCGRG00000014809	-	77	66.576	Cricetulus_griseus_crigri
ENSCAFG00000009311	-	97	76.447	ENSCGRG00000016075	-	84	82.719	Cricetulus_griseus_crigri
ENSCAFG00000009311	-	95	66.189	ENSCSEG00000012633	dkc1	92	72.082	Cynoglossus_semilaevis
ENSCAFG00000009311	-	77	76.650	ENSCVAG00000010155	dkc1	86	70.682	Cyprinodon_variegatus
ENSCAFG00000009311	-	78	76.515	ENSDARG00000016484	dkc1	78	76.515	Danio_rerio
ENSCAFG00000009311	-	96	78.400	ENSDNOG00000004218	DKC1	97	78.200	Dasypus_novemcinctus
ENSCAFG00000009311	-	58	69.333	ENSDORG00000013566	-	100	69.000	Dipodomys_ordii
ENSCAFG00000009311	-	81	65.122	FBgn0259937	Nop60B	89	59.701	Drosophila_melanogaster
ENSCAFG00000009311	-	82	81.579	ENSETEG00000016095	DKC1	85	81.579	Echinops_telfairi
ENSCAFG00000009311	-	62	71.250	ENSEBUG00000015962	dkc1	99	72.014	Eptatretus_burgeri
ENSCAFG00000009311	-	96	81.076	ENSEASG00005007484	DKC1	97	81.275	Equus_asinus_asinus
ENSCAFG00000009311	-	96	81.076	ENSECAG00000023524	DKC1	97	81.275	Equus_caballus
ENSCAFG00000009311	-	85	78.837	ENSEEUG00000003323	DKC1	100	79.070	Erinaceus_europaeus
ENSCAFG00000009311	-	84	72.897	ENSELUG00000014538	dkc1	87	71.759	Esox_lucius
ENSCAFG00000009311	-	97	79.192	ENSFCAG00000006577	DKC1	92	82.166	Felis_catus
ENSCAFG00000009311	-	86	74.376	ENSFALG00000011496	DKC1	82	74.545	Ficedula_albicollis
ENSCAFG00000009311	-	92	79.665	ENSFDAG00000002516	DKC1	93	79.665	Fukomys_damarensis
ENSCAFG00000009311	-	83	73.759	ENSFHEG00000004627	dkc1	88	71.267	Fundulus_heteroclitus
ENSCAFG00000009311	-	77	73.913	ENSGMOG00000017277	dkc1	100	73.913	Gadus_morhua
ENSCAFG00000009311	-	86	75.286	ENSGALG00000005054	DKC1	83	75.286	Gallus_gallus
ENSCAFG00000009311	-	96	67.284	ENSGAFG00000011486	dkc1	76	71.106	Gambusia_affinis
ENSCAFG00000009311	-	78	77.468	ENSGACG00000004373	dkc1	96	78.116	Gasterosteus_aculeatus
ENSCAFG00000009311	-	86	76.201	ENSGAGG00000011330	DKC1	86	74.836	Gopherus_agassizii
ENSCAFG00000009311	-	96	79.000	ENSGGOG00000001045	DKC1	96	78.800	Gorilla_gorilla
ENSCAFG00000009311	-	78	76.768	ENSHBUG00000012436	dkc1	88	71.364	Haplochromis_burtoni
ENSCAFG00000009311	-	89	81.898	ENSHGLG00000000649	DKC1	88	81.128	Heterocephalus_glaber_female
ENSCAFG00000009311	-	84	83.916	ENSHGLG00100001153	DKC1	85	83.295	Heterocephalus_glaber_male
ENSCAFG00000009311	-	78	76.456	ENSHCOG00000021099	dkc1	79	76.190	Hippocampus_comes
ENSCAFG00000009311	-	86	71.560	ENSIPUG00000010309	dkc1	83	71.560	Ictalurus_punctatus
ENSCAFG00000009311	-	90	81.441	ENSSTOG00000001074	-	93	81.223	Ictidomys_tridecemlineatus
ENSCAFG00000009311	-	97	68.400	ENSSTOG00000011904	-	93	68.400	Ictidomys_tridecemlineatus
ENSCAFG00000009311	-	97	71.486	ENSSTOG00000020149	-	97	71.888	Ictidomys_tridecemlineatus
ENSCAFG00000009311	-	58	70.569	ENSJJAG00000010086	-	100	70.569	Jaculus_jaculus
ENSCAFG00000009311	-	79	73.945	ENSKMAG00000008010	dkc1	81	73.945	Kryptolebias_marmoratus
ENSCAFG00000009311	-	79	75.312	ENSLBEG00000019122	dkc1	91	70.203	Labrus_bergylta
ENSCAFG00000009311	-	79	79.052	ENSLACG00000014025	DKC1	90	79.747	Latimeria_chalumnae
ENSCAFG00000009311	-	85	73.963	ENSLOCG00000013713	dkc1	86	75.000	Lepisosteus_oculatus
ENSCAFG00000009311	-	85	83.028	ENSLAFG00000000221	DKC1	84	83.028	Loxodonta_africana
ENSCAFG00000009311	-	96	79.400	ENSMFAG00000032398	DKC1	83	79.600	Macaca_fascicularis
ENSCAFG00000009311	-	96	78.800	ENSMMUG00000005768	DKC1	96	78.600	Macaca_mulatta
ENSCAFG00000009311	-	96	78.800	ENSMNEG00000034503	DKC1	96	78.600	Macaca_nemestrina
ENSCAFG00000009311	-	96	78.800	ENSMLEG00000034422	DKC1	96	78.600	Mandrillus_leucophaeus
ENSCAFG00000009311	-	80	75.306	ENSMAMG00000005427	dkc1	90	76.309	Mastacembelus_armatus
ENSCAFG00000009311	-	78	76.768	ENSMZEG00005014503	dkc1	88	71.364	Maylandia_zebra
ENSCAFG00000009311	-	79	75.062	ENSMGAG00000009238	DKC1	85	75.062	Meleagris_gallopavo
ENSCAFG00000009311	-	58	69.667	ENSMAUG00000016454	-	91	72.101	Mesocricetus_auratus
ENSCAFG00000009311	-	96	77.645	ENSMICG00000038751	-	97	77.844	Microcebus_murinus
ENSCAFG00000009311	-	85	69.910	ENSMICG00000002818	-	99	73.684	Microcebus_murinus
ENSCAFG00000009311	-	58	67.333	ENSMOCG00000001169	-	100	67.000	Microtus_ochrogaster
ENSCAFG00000009311	-	78	76.203	ENSMMOG00000020348	dkc1	86	76.203	Mola_mola
ENSCAFG00000009311	-	79	79.901	ENSMODG00000009243	DKC1	70	79.901	Monodelphis_domestica
ENSCAFG00000009311	-	78	76.010	ENSMALG00000009454	dkc1	78	76.010	Monopterus_albus
ENSCAFG00000009311	-	97	67.129	MGP_CAROLIEiJ_G0033191	Dkc1	97	66.733	Mus_caroli
ENSCAFG00000009311	-	97	76.861	ENSMUSG00000031403	Dkc1	84	82.258	Mus_musculus
ENSCAFG00000009311	-	97	75.800	MGP_PahariEiJ_G0031735	Dkc1	84	82.258	Mus_pahari
ENSCAFG00000009311	-	90	80.131	MGP_SPRETEiJ_G0034351	Dkc1	84	82.258	Mus_spretus
ENSCAFG00000009311	-	91	82.090	ENSMPUG00000016136	DKC1	93	80.160	Mustela_putorius_furo
ENSCAFG00000009311	-	91	76.356	ENSMLUG00000011918	DKC1	84	77.955	Myotis_lucifugus
ENSCAFG00000009311	-	58	69.565	ENSNGAG00000015724	-	100	69.565	Nannospalax_galili
ENSCAFG00000009311	-	78	77.215	ENSNBRG00000005638	dkc1	80	77.215	Neolamprologus_brichardi
ENSCAFG00000009311	-	96	79.200	ENSNLEG00000014323	DKC1	96	79.000	Nomascus_leucogenys
ENSCAFG00000009311	-	83	75.000	ENSMEUG00000001066	DKC1	95	73.733	Notamacropus_eugenii
ENSCAFG00000009311	-	68	79.143	ENSOPRG00000005248	DKC1	70	79.143	Ochotona_princeps
ENSCAFG00000009311	-	86	81.136	ENSODEG00000011816	-	85	81.922	Octodon_degus
ENSCAFG00000009311	-	58	70.667	ENSODEG00000000549	-	100	70.333	Octodon_degus
ENSCAFG00000009311	-	78	77.778	ENSONIG00000013889	dkc1	79	77.778	Oreochromis_niloticus
ENSCAFG00000009311	-	57	59.933	ENSOANG00000022295	-	82	59.933	Ornithorhynchus_anatinus
ENSCAFG00000009311	-	84	80.094	ENSOANG00000008713	-	87	80.094	Ornithorhynchus_anatinus
ENSCAFG00000009311	-	96	78.471	ENSOCUG00000012646	DKC1	96	79.276	Oryctolagus_cuniculus
ENSCAFG00000009311	-	77	76.982	ENSORLG00000018748	dkc1	78	76.203	Oryzias_latipes
ENSCAFG00000009311	-	78	76.768	ENSOMEG00000005786	dkc1	80	76.395	Oryzias_melastigma
ENSCAFG00000009311	-	90	81.034	ENSOGAG00000003399	DKC1	89	80.819	Otolemur_garnettii
ENSCAFG00000009311	-	91	81.128	ENSOARG00000003047	DKC1	90	80.911	Ovis_aries
ENSCAFG00000009311	-	96	78.600	ENSPPAG00000023820	DKC1	96	78.800	Pan_paniscus
ENSCAFG00000009311	-	91	81.075	ENSPPRG00000009104	DKC1	92	81.953	Panthera_pardus
ENSCAFG00000009311	-	87	81.633	ENSPTIG00000017469	DKC1	92	79.193	Panthera_tigris_altaica
ENSCAFG00000009311	-	96	79.000	ENSPTRG00000043416	-	84	79.200	Pan_troglodytes
ENSCAFG00000009311	-	96	79.000	ENSPTRG00000022449	DKC1	96	78.800	Pan_troglodytes
ENSCAFG00000009311	-	96	78.800	ENSPANG00000011978	DKC1	96	78.600	Papio_anubis
ENSCAFG00000009311	-	88	70.199	ENSPKIG00000008443	dkc1	84	77.215	Paramormyrops_kingsleyae
ENSCAFG00000009311	-	70	81.285	ENSPSIG00000013765	DKC1	86	81.285	Pelodiscus_sinensis
ENSCAFG00000009311	-	90	65.665	ENSPMGG00000004097	dkc1	87	65.665	Periophthalmus_magnuspinnatus
ENSCAFG00000009311	-	73	79.487	ENSPEMG00000013348	Dkc1	81	84.795	Peromyscus_maniculatus_bairdii
ENSCAFG00000009311	-	84	78.089	ENSPCIG00000016706	DKC1	76	74.946	Phascolarctos_cinereus
ENSCAFG00000009311	-	95	67.629	ENSPFOG00000018653	dkc1	88	71.493	Poecilia_formosa
ENSCAFG00000009311	-	95	67.629	ENSPLAG00000003272	dkc1	80	71.493	Poecilia_latipinna
ENSCAFG00000009311	-	81	74.820	ENSPMEG00000010413	dkc1	88	72.398	Poecilia_mexicana
ENSCAFG00000009311	-	95	67.835	ENSPREG00000004100	dkc1	87	71.461	Poecilia_reticulata
ENSCAFG00000009311	-	95	78.990	ENSPPYG00000020892	DKC1	93	79.958	Pongo_abelii
ENSCAFG00000009311	-	72	83.740	ENSPCAG00000015034	DKC1	72	83.740	Procavia_capensis
ENSCAFG00000009311	-	96	79.200	ENSPCOG00000026874	DKC1	96	79.600	Propithecus_coquereli
ENSCAFG00000009311	-	97	77.309	ENSPVAG00000009222	DKC1	93	78.616	Pteropus_vampyrus
ENSCAFG00000009311	-	78	76.709	ENSPNYG00000020063	dkc1	79	76.709	Pundamilia_nyererei
ENSCAFG00000009311	-	86	71.724	ENSPNAG00000005780	dkc1	88	70.588	Pygocentrus_nattereri
ENSCAFG00000009311	-	86	75.455	ENSRNOG00000055562	Dkc1	85	75.455	Rattus_norvegicus
ENSCAFG00000009311	-	96	78.800	ENSRBIG00000028457	DKC1	83	79.000	Rhinopithecus_bieti
ENSCAFG00000009311	-	96	78.800	ENSRROG00000044780	DKC1	96	78.600	Rhinopithecus_roxellana
ENSCAFG00000009311	-	75	62.760	YLR175W	-	85	60.097	Saccharomyces_cerevisiae
ENSCAFG00000009311	-	96	78.400	ENSSBOG00000033746	DKC1	88	82.314	Saimiri_boliviensis_boliviensis
ENSCAFG00000009311	-	86	76.538	ENSSHAG00000002463	DKC1	91	76.538	Sarcophilus_harrisii
ENSCAFG00000009311	-	86	72.082	ENSSFOG00015009585	dkc1	81	75.061	Scleropages_formosus
ENSCAFG00000009311	-	87	70.880	ENSSMAG00000002552	dkc1	86	74.126	Scophthalmus_maximus
ENSCAFG00000009311	-	77	77.665	ENSSDUG00000009963	dkc1	87	72.374	Seriola_dumerili
ENSCAFG00000009311	-	77	77.608	ENSSLDG00000019342	dkc1	89	73.210	Seriola_lalandi_dorsalis
ENSCAFG00000009311	-	92	73.404	ENSSARG00000001822	DKC1	93	73.617	Sorex_araneus
ENSCAFG00000009311	-	85	75.626	ENSSPUG00000018907	DKC1	83	75.626	Sphenodon_punctatus
ENSCAFG00000009311	-	79	76.250	ENSSPAG00000002585	dkc1	84	71.136	Stegastes_partitus
ENSCAFG00000009311	-	96	78.443	ENSSSCG00000012823	DKC1	95	82.159	Sus_scrofa
ENSCAFG00000009311	-	79	75.561	ENSTGUG00000006781	DKC1	89	73.966	Taeniopygia_guttata
ENSCAFG00000009311	-	80	74.755	ENSTRUG00000004413	dkc1	83	74.092	Takifugu_rubripes
ENSCAFG00000009311	-	81	62.053	ENSTNIG00000002582	dkc1	81	62.053	Tetraodon_nigroviridis
ENSCAFG00000009311	-	68	77.650	ENSTBEG00000011262	DKC1	95	79.656	Tupaia_belangeri
ENSCAFG00000009311	-	53	86.909	ENSTTRG00000008089	DKC1	54	86.909	Tursiops_truncatus
ENSCAFG00000009311	-	94	80.943	ENSUAMG00000022721	DKC1	92	84.598	Ursus_americanus
ENSCAFG00000009311	-	94	80.738	ENSUMAG00000016899	DKC1	92	86.772	Ursus_maritimus
ENSCAFG00000009311	-	97	81.098	ENSVVUG00000021671	-	91	80.894	Vulpes_vulpes
ENSCAFG00000009311	-	96	82.738	ENSVVUG00000020734	-	84	83.778	Vulpes_vulpes
ENSCAFG00000009311	-	92	69.723	ENSXETG00000032517	DKC1	90	69.851	Xenopus_tropicalis
ENSCAFG00000009311	-	79	75.990	ENSXCOG00000005498	dkc1	95	71.106	Xiphophorus_couchianus
ENSCAFG00000009311	-	78	76.768	ENSXMAG00000004919	dkc1	89	71.041	Xiphophorus_maculatus