EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000009574 (Gene tree)
Gene ID: 609283
Gene Symbol: SNRNP48
Alias: -
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 19838 bases
Position: chr35:7528175-7548012
Accession: 46608
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000014074	zf-U11-48K	PF05253.12	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000015209	-	4399	XM_846517	ENSCAFP00000014074	406 (aa)	XP_851610	F1PHP8

Gene Model

Click here to download ENSCAFG00000009574's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009574's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000009574	SNRNP48	83	91.691	ENSG00000168566	SNRNP48	99	91.667	Homo_sapiens
ENSCAFG00000009574	SNRNP48	67	47.350	ENSAPOG00000021430	snrnp48	96	44.092	Acanthochromis_polyacanthus
ENSCAFG00000009574	SNRNP48	83	92.754	ENSAMEG00000017349	SNRNP48	99	92.733	Ailuropoda_melanoleuca
ENSCAFG00000009574	SNRNP48	69	46.127	ENSACIG00000002032	snrnp48	96	43.155	Amphilophus_citrinellus
ENSCAFG00000009574	SNRNP48	67	47.350	ENSAOCG00000010562	snrnp48	96	44.380	Amphiprion_ocellaris
ENSCAFG00000009574	SNRNP48	67	47.331	ENSAPEG00000003231	snrnp48	96	44.348	Amphiprion_percula
ENSCAFG00000009574	SNRNP48	68	46.713	ENSATEG00000020210	snrnp48	84	48.311	Anabas_testudineus
ENSCAFG00000009574	SNRNP48	69	64.041	ENSACAG00000002811	SNRNP48	90	64.041	Anolis_carolinensis
ENSCAFG00000009574	SNRNP48	83	91.098	ENSANAG00000033538	SNRNP48	99	91.071	Aotus_nancymaae
ENSCAFG00000009574	SNRNP48	77	45.794	ENSAMXG00000015309	snrnp48	97	44.058	Astyanax_mexicanus
ENSCAFG00000009574	SNRNP48	83	87.278	ENSBTAG00000001123	SNRNP48	99	88.427	Bos_taurus
ENSCAFG00000009574	SNRNP48	83	91.395	ENSCJAG00000021330	SNRNP48	99	91.369	Callithrix_jacchus
ENSCAFG00000009574	SNRNP48	84	99.706	ENSCAFG00020013203	SNRNP48	100	99.706	Canis_lupus_dingo
ENSCAFG00000009574	SNRNP48	83	88.166	ENSCHIG00000015216	SNRNP48	99	89.318	Capra_hircus
ENSCAFG00000009574	SNRNP48	83	89.318	ENSTSYG00000000698	SNRNP48	99	89.286	Carlito_syrichta
ENSCAFG00000009574	SNRNP48	76	84.416	ENSCAPG00000006768	SNRNP48	100	84.416	Cavia_aperea
ENSCAFG00000009574	SNRNP48	83	87.500	ENSCPOG00000007910	SNRNP48	99	87.500	Cavia_porcellus
ENSCAFG00000009574	SNRNP48	83	89.911	ENSCCAG00000035652	SNRNP48	99	89.881	Cebus_capucinus
ENSCAFG00000009574	SNRNP48	83	91.098	ENSCATG00000033947	SNRNP48	99	91.071	Cercocebus_atys
ENSCAFG00000009574	SNRNP48	83	87.798	ENSCLAG00000003765	SNRNP48	99	87.798	Chinchilla_lanigera
ENSCAFG00000009574	SNRNP48	83	91.691	ENSCSAG00000007409	SNRNP48	99	91.667	Chlorocebus_sabaeus
ENSCAFG00000009574	SNRNP48	71	64.901	ENSCPBG00000019146	SNRNP48	92	64.901	Chrysemys_picta_bellii
ENSCAFG00000009574	SNRNP48	83	91.691	ENSCANG00000030017	SNRNP48	99	91.667	Colobus_angolensis_palliatus
ENSCAFG00000009574	SNRNP48	83	87.834	ENSCGRG00001001076	-	99	87.798	Cricetulus_griseus_chok1gshd
ENSCAFG00000009574	SNRNP48	82	69.578	ENSCGRG00001008805	-	94	68.976	Cricetulus_griseus_chok1gshd
ENSCAFG00000009574	SNRNP48	83	87.834	ENSCGRG00000007781	Snrnp48	99	87.798	Cricetulus_griseus_crigri
ENSCAFG00000009574	SNRNP48	64	46.743	ENSCSEG00000000722	snrnp48	72	47.510	Cynoglossus_semilaevis
ENSCAFG00000009574	SNRNP48	81	41.983	ENSCVAG00000019829	snrnp48	89	41.311	Cyprinodon_variegatus
ENSCAFG00000009574	SNRNP48	68	46.127	ENSDARG00000039989	snrnp48	87	46.711	Danio_rerio
ENSCAFG00000009574	SNRNP48	83	90.855	ENSDNOG00000014978	SNRNP48	99	91.642	Dasypus_novemcinctus
ENSCAFG00000009574	SNRNP48	83	87.202	ENSDORG00000015140	Snrnp48	99	87.202	Dipodomys_ordii
ENSCAFG00000009574	SNRNP48	83	93.731	ENSEASG00005012021	SNRNP48	99	93.731	Equus_asinus_asinus
ENSCAFG00000009574	SNRNP48	83	94.345	ENSECAG00000026937	SNRNP48	99	94.345	Equus_caballus
ENSCAFG00000009574	SNRNP48	83	68.437	ENSEEUG00000015437	SNRNP48	99	67.953	Erinaceus_europaeus
ENSCAFG00000009574	SNRNP48	73	46.535	ENSELUG00000009766	snrnp48	94	43.440	Esox_lucius
ENSCAFG00000009574	SNRNP48	83	95.252	ENSFCAG00000018853	SNRNP48	99	95.238	Felis_catus
ENSCAFG00000009574	SNRNP48	70	65.411	ENSFALG00000007797	SNRNP48	93	65.411	Ficedula_albicollis
ENSCAFG00000009574	SNRNP48	83	88.060	ENSFDAG00000009231	SNRNP48	99	88.060	Fukomys_damarensis
ENSCAFG00000009574	SNRNP48	61	47.984	ENSGMOG00000018599	-	93	43.934	Gadus_morhua
ENSCAFG00000009574	SNRNP48	68	63.763	ENSGALG00000013005	SNRNP48	89	67.300	Gallus_gallus
ENSCAFG00000009574	SNRNP48	61	48.617	ENSGAFG00000021639	snrnp48	92	43.114	Gambusia_affinis
ENSCAFG00000009574	SNRNP48	59	49.587	ENSGACG00000017756	-	96	44.023	Gasterosteus_aculeatus
ENSCAFG00000009574	SNRNP48	70	64.667	ENSGAGG00000000865	SNRNP48	97	64.667	Gopherus_agassizii
ENSCAFG00000009574	SNRNP48	83	91.691	ENSGGOG00000013220	SNRNP48	99	91.667	Gorilla_gorilla
ENSCAFG00000009574	SNRNP48	81	40.882	ENSHBUG00000017066	snrnp48	95	41.667	Haplochromis_burtoni
ENSCAFG00000009574	SNRNP48	83	88.657	ENSHGLG00000015241	SNRNP48	99	88.657	Heterocephalus_glaber_female
ENSCAFG00000009574	SNRNP48	83	88.657	ENSHGLG00100010027	SNRNP48	99	88.657	Heterocephalus_glaber_male
ENSCAFG00000009574	SNRNP48	59	45.679	ENSHCOG00000014066	snrnp48	92	40.909	Hippocampus_comes
ENSCAFG00000009574	SNRNP48	83	92.560	ENSSTOG00000014635	SNRNP48	99	92.560	Ictidomys_tridecemlineatus
ENSCAFG00000009574	SNRNP48	84	84.412	ENSJJAG00000011495	Snrnp48	99	84.776	Jaculus_jaculus
ENSCAFG00000009574	SNRNP48	75	43.648	ENSKMAG00000016514	snrnp48	80	45.907	Kryptolebias_marmoratus
ENSCAFG00000009574	SNRNP48	64	47.893	ENSLBEG00000026249	snrnp48	95	43.917	Labrus_bergylta
ENSCAFG00000009574	SNRNP48	85	51.714	ENSLACG00000003958	SNRNP48	98	52.187	Latimeria_chalumnae
ENSCAFG00000009574	SNRNP48	69	50.694	ENSLOCG00000004187	snrnp48	95	48.105	Lepisosteus_oculatus
ENSCAFG00000009574	SNRNP48	82	88.024	ENSLAFG00000011152	SNRNP48	99	88.024	Loxodonta_africana
ENSCAFG00000009574	SNRNP48	83	91.988	ENSMFAG00000045216	SNRNP48	99	91.964	Macaca_fascicularis
ENSCAFG00000009574	SNRNP48	83	91.988	ENSMMUG00000014785	SNRNP48	99	91.964	Macaca_mulatta
ENSCAFG00000009574	SNRNP48	83	91.691	ENSMNEG00000042269	SNRNP48	99	91.667	Macaca_nemestrina
ENSCAFG00000009574	SNRNP48	83	91.988	ENSMLEG00000034004	SNRNP48	99	91.964	Mandrillus_leucophaeus
ENSCAFG00000009574	SNRNP48	63	47.674	ENSMAMG00000018673	snrnp48	82	44.379	Mastacembelus_armatus
ENSCAFG00000009574	SNRNP48	69	64.966	ENSMGAG00000006037	SNRNP48	99	65.753	Meleagris_gallopavo
ENSCAFG00000009574	SNRNP48	83	88.690	ENSMAUG00000011944	Snrnp48	99	88.393	Mesocricetus_auratus
ENSCAFG00000009574	SNRNP48	83	89.911	ENSMICG00000012497	SNRNP48	99	89.881	Microcebus_murinus
ENSCAFG00000009574	SNRNP48	83	88.095	ENSMOCG00000015555	Snrnp48	99	87.798	Microtus_ochrogaster
ENSCAFG00000009574	SNRNP48	88	68.464	ENSMODG00000009996	SNRNP48	99	68.464	Monodelphis_domestica
ENSCAFG00000009574	SNRNP48	65	48.864	ENSMALG00000005725	snrnp48	95	45.345	Monopterus_albus
ENSCAFG00000009574	SNRNP48	83	86.350	MGP_CAROLIEiJ_G0018441	Snrnp48	99	86.607	Mus_caroli
ENSCAFG00000009574	SNRNP48	83	86.607	ENSMUSG00000021431	Snrnp48	99	86.607	Mus_musculus
ENSCAFG00000009574	SNRNP48	83	86.350	MGP_PahariEiJ_G0019509	Snrnp48	99	86.607	Mus_pahari
ENSCAFG00000009574	SNRNP48	83	86.053	MGP_SPRETEiJ_G0019321	Snrnp48	99	86.310	Mus_spretus
ENSCAFG00000009574	SNRNP48	83	86.905	ENSNGAG00000004849	Snrnp48	99	87.164	Nannospalax_galili
ENSCAFG00000009574	SNRNP48	64	45.977	ENSNBRG00000012127	snrnp48	94	41.176	Neolamprologus_brichardi
ENSCAFG00000009574	SNRNP48	83	91.988	ENSNLEG00000011667	SNRNP48	99	91.964	Nomascus_leucogenys
ENSCAFG00000009574	SNRNP48	79	77.950	ENSOPRG00000015471	SNRNP48	99	78.750	Ochotona_princeps
ENSCAFG00000009574	SNRNP48	64	46.360	ENSONIG00000001520	snrnp48	94	42.059	Oreochromis_niloticus
ENSCAFG00000009574	SNRNP48	70	88.811	ENSOCUG00000005168	SNRNP48	99	88.372	Oryctolagus_cuniculus
ENSCAFG00000009574	SNRNP48	74	46.429	ENSORLG00000015654	snrnp48	93	44.868	Oryzias_latipes
ENSCAFG00000009574	SNRNP48	78	44.136	ENSORLG00020015976	snrnp48	88	42.063	Oryzias_latipes_hni
ENSCAFG00000009574	SNRNP48	74	46.104	ENSORLG00015022379	snrnp48	80	44.868	Oryzias_latipes_hsok
ENSCAFG00000009574	SNRNP48	69	47.222	ENSOMEG00000022007	snrnp48	95	43.478	Oryzias_melastigma
ENSCAFG00000009574	SNRNP48	77	89.068	ENSOGAG00000005275	SNRNP48	96	89.274	Otolemur_garnettii
ENSCAFG00000009574	SNRNP48	71	89.199	ENSOARG00000017319	SNRNP48	100	89.199	Ovis_aries
ENSCAFG00000009574	SNRNP48	83	91.988	ENSPPAG00000032873	SNRNP48	99	91.964	Pan_paniscus
ENSCAFG00000009574	SNRNP48	83	95.252	ENSPPRG00000004283	SNRNP48	99	95.238	Panthera_pardus
ENSCAFG00000009574	SNRNP48	71	95.819	ENSPTIG00000013502	SNRNP48	100	95.819	Panthera_tigris_altaica
ENSCAFG00000009574	SNRNP48	83	91.988	ENSPTRG00000017703	SNRNP48	99	91.964	Pan_troglodytes
ENSCAFG00000009574	SNRNP48	83	91.988	ENSPANG00000000771	SNRNP48	99	91.964	Papio_anubis
ENSCAFG00000009574	SNRNP48	79	45.994	ENSPKIG00000013703	snrnp48	61	49.153	Paramormyrops_kingsleyae
ENSCAFG00000009574	SNRNP48	72	61.935	ENSPSIG00000002213	SNRNP48	95	62.013	Pelodiscus_sinensis
ENSCAFG00000009574	SNRNP48	67	46.739	ENSPMGG00000008120	snrnp48	95	46.886	Periophthalmus_magnuspinnatus
ENSCAFG00000009574	SNRNP48	83	88.427	ENSPEMG00000008872	Snrnp48	99	88.393	Peromyscus_maniculatus_bairdii
ENSCAFG00000009574	SNRNP48	67	48.551	ENSPFOG00000003578	snrnp48	92	44.444	Poecilia_formosa
ENSCAFG00000009574	SNRNP48	55	49.558	ENSPLAG00000002290	snrnp48	76	49.558	Poecilia_latipinna
ENSCAFG00000009574	SNRNP48	67	47.826	ENSPMEG00000018033	snrnp48	92	43.844	Poecilia_mexicana
ENSCAFG00000009574	SNRNP48	59	49.794	ENSPREG00000018541	snrnp48	92	44.444	Poecilia_reticulata
ENSCAFG00000009574	SNRNP48	83	90.504	ENSPPYG00000016209	SNRNP48	99	90.476	Pongo_abelii
ENSCAFG00000009574	SNRNP48	65	70.611	ENSPCAG00000011991	SNRNP48	98	70.611	Procavia_capensis
ENSCAFG00000009574	SNRNP48	83	89.881	ENSPVAG00000002854	SNRNP48	99	89.881	Pteropus_vampyrus
ENSCAFG00000009574	SNRNP48	64	45.455	ENSPNYG00000015399	snrnp48	94	44.333	Pundamilia_nyererei
ENSCAFG00000009574	SNRNP48	83	87.834	ENSRNOG00000013756	Snrnp48	99	88.095	Rattus_norvegicus
ENSCAFG00000009574	SNRNP48	76	91.558	ENSRBIG00000043856	SNRNP48	96	92.027	Rhinopithecus_bieti
ENSCAFG00000009574	SNRNP48	83	91.691	ENSRROG00000043229	SNRNP48	99	91.667	Rhinopithecus_roxellana
ENSCAFG00000009574	SNRNP48	83	91.098	ENSSBOG00000019486	SNRNP48	99	91.071	Saimiri_boliviensis_boliviensis
ENSCAFG00000009574	SNRNP48	82	71.221	ENSSHAG00000014483	SNRNP48	99	71.221	Sarcophilus_harrisii
ENSCAFG00000009574	SNRNP48	61	50.598	ENSSFOG00015006610	snrnp48	79	46.064	Scleropages_formosus
ENSCAFG00000009574	SNRNP48	74	44.186	ENSSDUG00000014953	snrnp48	96	42.522	Seriola_dumerili
ENSCAFG00000009574	SNRNP48	69	46.341	ENSSLDG00000005989	snrnp48	96	42.229	Seriola_lalandi_dorsalis
ENSCAFG00000009574	SNRNP48	70	64.765	ENSSPUG00000006257	SNRNP48	85	64.765	Sphenodon_punctatus
ENSCAFG00000009574	SNRNP48	65	47.601	ENSSPAG00000006454	snrnp48	92	44.277	Stegastes_partitus
ENSCAFG00000009574	SNRNP48	70	64.261	ENSTGUG00000007575	SNRNP48	93	64.261	Taeniopygia_guttata
ENSCAFG00000009574	SNRNP48	61	49.801	ENSTRUG00000007031	snrnp48	94	44.675	Takifugu_rubripes
ENSCAFG00000009574	SNRNP48	62	45.490	ENSTNIG00000012977	-	75	45.490	Tetraodon_nigroviridis
ENSCAFG00000009574	SNRNP48	83	74.107	ENSTBEG00000015620	SNRNP48	99	74.107	Tupaia_belangeri
ENSCAFG00000009574	SNRNP48	83	89.911	ENSTTRG00000016715	SNRNP48	99	89.881	Tursiops_truncatus
ENSCAFG00000009574	SNRNP48	83	95.846	ENSUAMG00000003690	SNRNP48	99	95.833	Ursus_americanus
ENSCAFG00000009574	SNRNP48	71	88.502	ENSVPAG00000003557	SNRNP48	100	88.502	Vicugna_pacos
ENSCAFG00000009574	SNRNP48	84	98.824	ENSVVUG00000004996	SNRNP48	100	98.824	Vulpes_vulpes
ENSCAFG00000009574	SNRNP48	72	53.000	ENSXETG00000020447	snrnp48	97	50.888	Xenopus_tropicalis
ENSCAFG00000009574	SNRNP48	55	49.339	ENSXCOG00000004478	snrnp48	68	49.339	Xiphophorus_couchianus
ENSCAFG00000009574	SNRNP48	67	48.551	ENSXMAG00000013595	snrnp48	92	44.776	Xiphophorus_maculatus