EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCAFG00000009618 (Gene tree)
Gene ID
475807
Gene Symbol
CSDE1
Alias
-
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Canis_familiaris
Status
putative
Strand
Minus strand
Length
23575 bases
Position
chr17:52420641-52444215
Accession
39650
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00000014163CSDPF00313.226.4e-8515
ENSCAFP00000014163CSDPF00313.226.4e-8525
ENSCAFP00000014163CSDPF00313.226.4e-8535
ENSCAFP00000014163CSDPF00313.226.4e-8545
ENSCAFP00000014163CSDPF00313.226.4e-8555
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00000015306-2394XM_005630644ENSCAFP00000014163798 (aa)XP_005630701F1PG95
Gene Model
Click here to download ENSCAFG00000009618's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009618's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00000009618CSDE110099.248ENSG00000009307CSDE1100100.000Homo_sapiens
ENSCAFG00000009618CSDE19478.117ENSAPOG00000015538csde19878.117Acanthochromis_polyacanthus
ENSCAFG00000009618CSDE110098.248ENSAMEG00000017129CSDE19898.248Ailuropoda_melanoleuca
ENSCAFG00000009618CSDE18777.027ENSACIG00000015175csde110077.027Amphilophus_citrinellus
ENSCAFG00000009618CSDE19478.249ENSAOCG00000011510csde19878.249Amphiprion_ocellaris
ENSCAFG00000009618CSDE19478.249ENSAPEG00000007194csde19878.249Amphiprion_percula
ENSCAFG00000009618CSDE19477.851ENSATEG00000003864csde19877.851Anabas_testudineus
ENSCAFG00000009618CSDE19492.011ENSAPLG00000008797CSDE19892.011Anas_platyrhynchos
ENSCAFG00000009618CSDE19487.980ENSACAG00000003120CSDE19887.980Anolis_carolinensis
ENSCAFG00000009618CSDE18973.050ENSANAG00000028396-9073.050Aotus_nancymaae
ENSCAFG00000009618CSDE110098.872ENSANAG00000024665CSDE19898.872Aotus_nancymaae
ENSCAFG00000009618CSDE19477.822ENSACLG00000013296csde19877.822Astatotilapia_calliptera
ENSCAFG00000009618CSDE19477.748ENSAMXG00000007436csde19877.748Astyanax_mexicanus
ENSCAFG00000009618CSDE110095.054ENSBTAG00000000678CSDE19898.670Bos_taurus
ENSCAFG00000009618CSDE110098.997ENSCJAG00000012565CSDE19898.997Callithrix_jacchus
ENSCAFG00000009618CSDE194100.000ENSCAFG00020000481CSDE198100.000Canis_lupus_dingo
ENSCAFG00000009618CSDE110098.622ENSCHIG00000017250CSDE19898.670Capra_hircus
ENSCAFG00000009618CSDE110094.210ENSTSYG00000003747CSDE19898.404Carlito_syrichta
ENSCAFG00000009618CSDE19467.734ENSCAPG00000015128CSDE19867.734Cavia_aperea
ENSCAFG00000009618CSDE19492.119ENSCPOG00000040388CSDE19892.119Cavia_porcellus
ENSCAFG00000009618CSDE19177.228ENSCCAG00000033677-9976.722Cebus_capucinus
ENSCAFG00000009618CSDE19173.963ENSCCAG00000030878-8873.963Cebus_capucinus
ENSCAFG00000009618CSDE110098.997ENSCCAG00000036794CSDE19898.997Cebus_capucinus
ENSCAFG00000009618CSDE110099.248ENSCATG00000036962CSDE19899.248Cercocebus_atys
ENSCAFG00000009618CSDE19498.803ENSCLAG00000006618CSDE19898.803Chinchilla_lanigera
ENSCAFG00000009618CSDE110095.537ENSCSAG00000001658CSDE19895.537Chlorocebus_sabaeus
ENSCAFG00000009618CSDE194100.000ENSCHOG00000000918CSDE187100.000Choloepus_hoffmanni
ENSCAFG00000009618CSDE19492.144ENSCPBG00000016547CSDE19892.144Chrysemys_picta_bellii
ENSCAFG00000009618CSDE19242.269ENSCING00000014465-9542.269Ciona_intestinalis
ENSCAFG00000009618CSDE19242.092ENSCSAVG00000008100-9842.092Ciona_savignyi
ENSCAFG00000009618CSDE110099.123ENSCANG00000035096CSDE19899.123Colobus_angolensis_palliatus
ENSCAFG00000009618CSDE18695.911ENSCANG00000031069-9495.911Colobus_angolensis_palliatus
ENSCAFG00000009618CSDE19498.404ENSCGRG00001016833-9898.404Cricetulus_griseus_chok1gshd
ENSCAFG00000009618CSDE19480.851ENSCGRG00001014011-9880.851Cricetulus_griseus_chok1gshd
ENSCAFG00000009618CSDE19484.783ENSCGRG00000005831-9884.783Cricetulus_griseus_crigri
ENSCAFG00000009618CSDE19198.157ENSCGRG00000002225-9798.157Cricetulus_griseus_crigri
ENSCAFG00000009618CSDE19477.689ENSCSEG00000002620csde19877.689Cynoglossus_semilaevis
ENSCAFG00000009618CSDE19477.188ENSCVAG00000001344csde19877.188Cyprinodon_variegatus
ENSCAFG00000009618CSDE19971.596ENSDARG00000074758csde110075.132Danio_rerio
ENSCAFG00000009618CSDE19598.283ENSDNOG00000010287-9298.283Dasypus_novemcinctus
ENSCAFG00000009618CSDE17478.261ENSDNOG00000034464-10070.342Dasypus_novemcinctus
ENSCAFG00000009618CSDE19398.009ENSDORG00000011609Csde19898.009Dipodomys_ordii
ENSCAFG00000009618CSDE19347.951FBgn0263352Unr7447.581Drosophila_melanogaster
ENSCAFG00000009618CSDE19398.347ENSETEG00000002491-7898.347Echinops_telfairi
ENSCAFG00000009618CSDE18787.184ENSETEG00000006280-10087.184Echinops_telfairi
ENSCAFG00000009618CSDE17468.761ENSETEG00000007109-9868.761Echinops_telfairi
ENSCAFG00000009618CSDE19476.964ENSETEG00000013678-9876.964Echinops_telfairi
ENSCAFG00000009618CSDE19454.432ENSEBUG00000008647csde19852.721Eptatretus_burgeri
ENSCAFG00000009618CSDE110098.371ENSEASG00005006284CSDE19898.371Equus_asinus_asinus
ENSCAFG00000009618CSDE110098.371ENSECAG00000020885CSDE19898.371Equus_caballus
ENSCAFG00000009618CSDE19499.476ENSEEUG00000006286CSDE17499.476Erinaceus_europaeus
ENSCAFG00000009618CSDE19476.354ENSELUG00000015507csde19876.354Esox_lucius
ENSCAFG00000009618CSDE110099.749ENSFCAG00000029266CSDE19899.749Felis_catus
ENSCAFG00000009618CSDE19487.852ENSFALG00000003407CSDE19887.852Ficedula_albicollis
ENSCAFG00000009618CSDE19398.928ENSFDAG00000007882CSDE19898.928Fukomys_damarensis
ENSCAFG00000009618CSDE19477.454ENSFHEG00000010799csde19977.454Fundulus_heteroclitus
ENSCAFG00000009618CSDE19474.680ENSGMOG00000012731csde19874.680Gadus_morhua
ENSCAFG00000009618CSDE19488.363ENSGALG00000002139CSDE19888.363Gallus_gallus
ENSCAFG00000009618CSDE18976.677ENSGAFG00000005241csde19576.677Gambusia_affinis
ENSCAFG00000009618CSDE19475.479ENSGACG00000004544csde19875.479Gasterosteus_aculeatus
ENSCAFG00000009618CSDE19990.226ENSGAGG00000017685CSDE19888.107Gopherus_agassizii
ENSCAFG00000009618CSDE110099.248ENSGGOG00000002164CSDE19899.335Gorilla_gorilla
ENSCAFG00000009618CSDE19477.822ENSHBUG00000020315csde19877.822Haplochromis_burtoni
ENSCAFG00000009618CSDE19476.117ENSHGLG00000000650-9876.117Heterocephalus_glaber_female
ENSCAFG00000009618CSDE19489.096ENSHGLG00000003829-9889.096Heterocephalus_glaber_female
ENSCAFG00000009618CSDE19389.280ENSHGLG00000008555-9889.280Heterocephalus_glaber_female
ENSCAFG00000009618CSDE19488.830ENSHGLG00000009620-9889.096Heterocephalus_glaber_female
ENSCAFG00000009618CSDE19485.505ENSHGLG00000007471-9785.505Heterocephalus_glaber_female
ENSCAFG00000009618CSDE19189.862ENSHGLG00000010039-9789.862Heterocephalus_glaber_female
ENSCAFG00000009618CSDE19480.180ENSHGLG00000019549-9880.180Heterocephalus_glaber_female
ENSCAFG00000009618CSDE19181.797ENSHGLG00100004833-9681.797Heterocephalus_glaber_male
ENSCAFG00000009618CSDE19083.961ENSHGLG00100004195-10083.961Heterocephalus_glaber_male
ENSCAFG00000009618CSDE19480.637ENSHGLG00100002245-9880.637Heterocephalus_glaber_male
ENSCAFG00000009618CSDE19480.212ENSHGLG00100001846-9880.212Heterocephalus_glaber_male
ENSCAFG00000009618CSDE19499.069ENSHGLG00100019438-9899.069Heterocephalus_glaber_male
ENSCAFG00000009618CSDE19482.846ENSHGLG00100007287-9782.846Heterocephalus_glaber_male
ENSCAFG00000009618CSDE19484.309ENSHGLG00100012072-9884.309Heterocephalus_glaber_male
ENSCAFG00000009618CSDE19189.631ENSHGLG00100006910-9789.631Heterocephalus_glaber_male
ENSCAFG00000009618CSDE19476.790ENSHCOG00000004158csde19876.760Hippocampus_comes
ENSCAFG00000009618CSDE19477.219ENSIPUG00000000355csde19877.219Ictalurus_punctatus
ENSCAFG00000009618CSDE19479.922ENSSTOG00000030994-9879.922Ictidomys_tridecemlineatus
ENSCAFG00000009618CSDE18881.290ENSSTOG00000032722-9881.290Ictidomys_tridecemlineatus
ENSCAFG00000009618CSDE19398.469ENSJJAG00000019571Csde19898.469Jaculus_jaculus
ENSCAFG00000009618CSDE19873.269ENSKMAG00000005685csde19874.210Kryptolebias_marmoratus
ENSCAFG00000009618CSDE19477.984ENSLBEG00000014770csde19877.984Labrus_bergylta
ENSCAFG00000009618CSDE19775.586ENSLACG00000018452CSDE19475.776Latimeria_chalumnae
ENSCAFG00000009618CSDE19975.540ENSLOCG00000010413csde19477.736Lepisosteus_oculatus
ENSCAFG00000009618CSDE19597.487ENSLAFG00000007150CSDE19597.487Loxodonta_africana
ENSCAFG00000009618CSDE110099.248ENSMFAG00000003674CSDE19899.335Macaca_fascicularis
ENSCAFG00000009618CSDE110099.248ENSMMUG00000001974CSDE19999.293Macaca_mulatta
ENSCAFG00000009618CSDE110099.248ENSMNEG00000045247CSDE19899.248Macaca_nemestrina
ENSCAFG00000009618CSDE110098.997ENSMLEG00000038673CSDE19898.997Mandrillus_leucophaeus
ENSCAFG00000009618CSDE19478.780ENSMAMG00000008821csde19878.780Mastacembelus_armatus
ENSCAFG00000009618CSDE19477.822ENSMZEG00005021675csde19877.822Maylandia_zebra
ENSCAFG00000009618CSDE19491.755ENSMGAG00000016381CSDE19891.755Meleagris_gallopavo
ENSCAFG00000009618CSDE19398.469ENSMAUG00000014031Csde19898.469Mesocricetus_auratus
ENSCAFG00000009618CSDE110098.371ENSMICG00000002050CSDE19898.371Microcebus_murinus
ENSCAFG00000009618CSDE19498.537ENSMOCG00000018960Csde19898.537Microtus_ochrogaster
ENSCAFG00000009618CSDE19478.117ENSMMOG00000015075csde19878.117Mola_mola
ENSCAFG00000009618CSDE19594.591ENSMODG00000004685CSDE19891.954Monodelphis_domestica
ENSCAFG00000009618CSDE19478.249ENSMALG00000007132csde19878.249Monopterus_albus
ENSCAFG00000009618CSDE19498.138MGP_CAROLIEiJ_G0025444Csde110098.013Mus_caroli
ENSCAFG00000009618CSDE19498.271ENSMUSG00000068823Csde110098.013Mus_musculus
ENSCAFG00000009618CSDE19498.537MGP_PahariEiJ_G0026888Csde110098.013Mus_pahari
ENSCAFG00000009618CSDE19498.537MGP_SPRETEiJ_G0026394Csde110098.013Mus_spretus
ENSCAFG00000009618CSDE19495.785ENSMPUG00000005753CSDE19995.785Mustela_putorius_furo
ENSCAFG00000009618CSDE110097.995ENSMLUG00000005681CSDE19897.995Myotis_lucifugus
ENSCAFG00000009618CSDE19398.622ENSNGAG00000021929Csde19898.622Nannospalax_galili
ENSCAFG00000009618CSDE19171.198ENSNGAG00000012599-9671.198Nannospalax_galili
ENSCAFG00000009618CSDE19477.822ENSNBRG00000020808csde19877.822Neolamprologus_brichardi
ENSCAFG00000009618CSDE110099.123ENSNLEG00000004842CSDE19899.123Nomascus_leucogenys
ENSCAFG00000009618CSDE19491.489ENSMEUG00000002677CSDE110091.489Notamacropus_eugenii
ENSCAFG00000009618CSDE110094.048ENSOPRG00000005002CSDE18894.048Ochotona_princeps
ENSCAFG00000009618CSDE19398.622ENSODEG00000007383-9898.622Octodon_degus
ENSCAFG00000009618CSDE19167.048ENSODEG00000005979-9467.048Octodon_degus
ENSCAFG00000009618CSDE19473.159ENSONIG00000009309csde19873.159Oreochromis_niloticus
ENSCAFG00000009618CSDE19475.573ENSOANG00000003346-9875.573Ornithorhynchus_anatinus
ENSCAFG00000009618CSDE110094.451ENSOCUG00000016438CSDE19894.451Oryctolagus_cuniculus
ENSCAFG00000009618CSDE19477.955ENSORLG00000000707csde19877.955Oryzias_latipes
ENSCAFG00000009618CSDE19873.219ENSORLG00020005148csde19873.159Oryzias_latipes_hni
ENSCAFG00000009618CSDE19477.955ENSORLG00015019415csde19877.955Oryzias_latipes_hsok
ENSCAFG00000009618CSDE19478.647ENSOMEG00000015656csde19878.647Oryzias_melastigma
ENSCAFG00000009618CSDE110098.872ENSOGAG00000012127CSDE19898.872Otolemur_garnettii
ENSCAFG00000009618CSDE110098.747ENSOARG00000020034CSDE19898.747Ovis_aries
ENSCAFG00000009618CSDE110099.248ENSPPAG00000025861CSDE19899.335Pan_paniscus
ENSCAFG00000009618CSDE110099.749ENSPPRG00000006747CSDE19899.749Panthera_pardus
ENSCAFG00000009618CSDE110099.749ENSPTIG00000015468CSDE19899.749Panthera_tigris_altaica
ENSCAFG00000009618CSDE110099.123ENSPTRG00000033721CSDE19899.123Pan_troglodytes
ENSCAFG00000009618CSDE110099.248ENSPANG00000018873CSDE19899.335Papio_anubis
ENSCAFG00000009618CSDE19477.556ENSPKIG00000009459csde19877.556Paramormyrops_kingsleyae
ENSCAFG00000009618CSDE19288.717ENSPSIG00000003823CSDE19688.717Pelodiscus_sinensis
ENSCAFG00000009618CSDE19477.719ENSPMGG00000000772csde19877.719Periophthalmus_magnuspinnatus
ENSCAFG00000009618CSDE19398.469ENSPEMG00000020357-9898.469Peromyscus_maniculatus_bairdii
ENSCAFG00000009618CSDE110090.385ENSPCIG00000022587CSDE19892.082Phascolarctos_cinereus
ENSCAFG00000009618CSDE19376.651ENSPFOG00000012664csde19875.955Poecilia_formosa
ENSCAFG00000009618CSDE19371.275ENSPLAG00000017680csde19371.275Poecilia_latipinna
ENSCAFG00000009618CSDE19371.582ENSPMEG00000005094csde19571.582Poecilia_mexicana
ENSCAFG00000009618CSDE19872.539ENSPREG00000011631csde19871.656Poecilia_reticulata
ENSCAFG00000009618CSDE19495.275ENSPPYG00000000996CSDE19895.275Pongo_abelii
ENSCAFG00000009618CSDE110093.609ENSPCAG00000014368CSDE19893.108Procavia_capensis
ENSCAFG00000009618CSDE18682.482ENSPCOG00000008223-9282.482Propithecus_coquereli
ENSCAFG00000009618CSDE19499.069ENSPCOG00000017893CSDE19899.069Propithecus_coquereli
ENSCAFG00000009618CSDE19498.141ENSPVAG00000008225CSDE19398.141Pteropus_vampyrus
ENSCAFG00000009618CSDE19477.822ENSPNYG00000013745csde19877.822Pundamilia_nyererei
ENSCAFG00000009618CSDE19478.515ENSPNAG00000001958csde19878.515Pygocentrus_nattereri
ENSCAFG00000009618CSDE19494.508ENSRNOG00000061058Csde19894.508Rattus_norvegicus
ENSCAFG00000009618CSDE110093.750ENSRBIG00000038966-9893.750Rhinopithecus_bieti
ENSCAFG00000009618CSDE19495.485ENSRBIG00000038088-9697.613Rhinopithecus_bieti
ENSCAFG00000009618CSDE110099.248ENSRROG00000043101CSDE19899.248Rhinopithecus_roxellana
ENSCAFG00000009618CSDE110098.997ENSSBOG00000035592CSDE19898.997Saimiri_boliviensis_boliviensis
ENSCAFG00000009618CSDE110093.758ENSSHAG00000009831CSDE19895.745Sarcophilus_harrisii
ENSCAFG00000009618CSDE19477.188ENSSFOG00015007498csde19877.158Scleropages_formosus
ENSCAFG00000009618CSDE19478.647ENSSMAG00000007203csde19878.647Scophthalmus_maximus
ENSCAFG00000009618CSDE19478.117ENSSDUG00000015380csde19878.117Seriola_dumerili
ENSCAFG00000009618CSDE19478.117ENSSLDG00000008819csde19878.117Seriola_lalandi_dorsalis
ENSCAFG00000009618CSDE110096.746ENSSARG00000000738CSDE19896.746Sorex_araneus
ENSCAFG00000009618CSDE19987.334ENSSPUG00000008714CSDE19891.877Sphenodon_punctatus
ENSCAFG00000009618CSDE19973.576ENSSPAG00000000716csde19877.984Stegastes_partitus
ENSCAFG00000009618CSDE110095.416ENSSSCG00000006752CSDE19899.202Sus_scrofa
ENSCAFG00000009618CSDE19486.862ENSTGUG00000000972CSDE19886.862Taeniopygia_guttata
ENSCAFG00000009618CSDE19474.900ENSTRUG00000007996csde19874.900Takifugu_rubripes
ENSCAFG00000009618CSDE18973.180ENSTNIG00000010878csde110073.180Tetraodon_nigroviridis
ENSCAFG00000009618CSDE19398.718ENSTBEG00000011880-6598.718Tupaia_belangeri
ENSCAFG00000009618CSDE110098.496ENSTTRG00000015583CSDE19898.496Tursiops_truncatus
ENSCAFG00000009618CSDE18695.008ENSUAMG00000024289-9995.008Ursus_americanus
ENSCAFG00000009618CSDE18599.357ENSUAMG00000021779-10099.357Ursus_americanus
ENSCAFG00000009618CSDE18199.507ENSUMAG00000011714-9599.507Ursus_maritimus
ENSCAFG00000009618CSDE19889.245ENSUMAG00000009720-9691.402Ursus_maritimus
ENSCAFG00000009618CSDE110098.485ENSVPAG00000000749CSDE18398.485Vicugna_pacos
ENSCAFG00000009618CSDE18995.468ENSVVUG00000009890CSDE19495.468Vulpes_vulpes
ENSCAFG00000009618CSDE19482.038ENSXETG00000021448csde19882.038Xenopus_tropicalis
ENSCAFG00000009618CSDE18985.455ENSXCOG00000000035csde18585.455Xiphophorus_couchianus
ENSCAFG00000009618CSDE19973.640ENSXMAG00000009080csde19877.984Xiphophorus_maculatus

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