EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000009706 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 467 bases
Position: chr33:9755340-9755806
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000037396	Ribosomal_L23	PF00276.20	1.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000015409	-	429	-	ENSCAFP00000037396	142 (aa)	-	J9NW52

Gene Model

Click here to download ENSCAFG00000009706's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000009706's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000009706	-	84	61.667	ENSCAFG00000005724	-	77	62.185
ENSCAFG00000009706	-	95	51.389	ENSCAFG00000015308	-	62	66.304
ENSCAFG00000009706	-	84	63.780	ENSCAFG00000031555	-	81	63.780
ENSCAFG00000009706	-	84	61.417	ENSCAFG00000017449	-	81	61.417
ENSCAFG00000009706	-	84	64.286	ENSCAFG00000004370	-	80	63.780
ENSCAFG00000009706	-	99	66.013	ENSCAFG00000017678	-	81	70.079
ENSCAFG00000009706	-	65	78.495	ENSCAFG00000000014	-	60	78.495
ENSCAFG00000009706	-	82	70.968	ENSCAFG00000015394	-	81	70.312
ENSCAFG00000009706	-	82	69.106	ENSCAFG00000018784	-	81	68.504
ENSCAFG00000009706	-	79	64.602	ENSCAFG00000018232	-	76	64.602
ENSCAFG00000009706	-	84	69.048	ENSCAFG00000001968	-	81	68.504
ENSCAFG00000009706	-	73	57.658	ENSCAFG00000007718	-	78	57.143
ENSCAFG00000009706	-	54	60.256	ENSCAFG00000028825	-	60	60.256
ENSCAFG00000009706	-	84	60.156	ENSCAFG00000001011	-	81	59.690
ENSCAFG00000009706	-	89	69.853	ENSCAFG00000019297	-	83	71.774
ENSCAFG00000009706	-	82	69.106	ENSCAFG00000031731	-	81	68.504
ENSCAFG00000009706	-	82	74.576	ENSCAFG00000017753	-	81	73.770
ENSCAFG00000009706	-	100	51.656	ENSCAFG00000014107	-	82	55.200
ENSCAFG00000009706	-	82	67.480	ENSCAFG00000004003	-	84	67.717
ENSCAFG00000009706	-	82	62.810	ENSCAFG00000002410	-	81	63.200
ENSCAFG00000009706	-	82	69.106	ENSCAFG00000016268	-	81	68.504
ENSCAFG00000009706	-	71	75.490	ENSCAFG00000024043	-	81	66.929
ENSCAFG00000009706	-	85	65.000	ENSCAFG00000007256	-	80	65.000
ENSCAFG00000009706	-	96	52.000	ENSCAFG00000006700	-	79	52.756
ENSCAFG00000009706	-	96	54.167	ENSCAFG00000003985	-	82	56.911
ENSCAFG00000009706	-	95	49.032	ENSCAFG00000003391	-	58	64.130
ENSCAFG00000009706	-	82	65.574	ENSCAFG00000030594	-	80	65.873
ENSCAFG00000009706	-	80	69.565	ENSCAFG00000003753	-	78	68.908
ENSCAFG00000009706	-	97	54.167	ENSCAFG00000003274	-	79	57.025
ENSCAFG00000009706	-	65	72.043	ENSCAFG00000003047	-	80	60.484
ENSCAFG00000009706	-	82	68.293	ENSCAFG00000002548	-	81	67.717
ENSCAFG00000009706	-	84	66.667	ENSCAFG00000020044	-	81	66.142
ENSCAFG00000009706	-	84	64.754	ENSCAFG00000030051	-	80	64.754
ENSCAFG00000009706	-	80	61.739	ENSCAFG00000004716	-	76	61.739
ENSCAFG00000009706	-	82	67.480	ENSCAFG00000024427	-	81	67.717
ENSCAFG00000009706	-	82	72.881	ENSCAFG00000004933	-	83	72.269

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000009706	-	98	64.189	ENSAMEG00000005208	-	81	66.935	Ailuropoda_melanoleuca
ENSCAFG00000009706	-	81	56.452	ENSCGRG00001011003	-	80	56.693	Cricetulus_griseus_chok1gshd
ENSCAFG00000009706	-	81	56.452	ENSCGRG00000019420	-	80	56.693	Cricetulus_griseus_crigri
ENSCAFG00000009706	-	97	49.655	ENSDNOG00000039276	-	79	50.820	Dasypus_novemcinctus
ENSCAFG00000009706	-	98	54.861	ENSDNOG00000041286	-	79	57.851	Dasypus_novemcinctus
ENSCAFG00000009706	-	98	46.528	ENSEASG00005003371	-	87	46.528	Equus_asinus_asinus
ENSCAFG00000009706	-	70	49.057	MGP_CAROLIEiJ_G0018758	-	88	49.057	Mus_caroli
ENSCAFG00000009706	-	70	48.113	MGP_SPRETEiJ_G0019641	-	88	48.113	Mus_spretus
ENSCAFG00000009706	-	99	61.224	ENSOCUG00000021843	-	98	57.823	Oryctolagus_cuniculus