EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000010026 (Gene tree)
Gene ID: 100856284
Gene Symbol: SMARCAD1
Alias: -
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 76643 bases
Position: chr32:17089977-17166619
Accession: 46532
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000037859	ResIII	PF04851.15	9.7e-11	1	1
ENSCAFP00000014754	ResIII	PF04851.15	1.1e-10	1	1
ENSCAFP00000042662	ResIII	PF04851.15	1.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000043847	-	3150	XM_003640105	ENSCAFP00000042662	1026 (aa)	XP_005639251	J9PA79
ENSCAFT00000015951	-	3081	-	ENSCAFP00000014754	1026 (aa)	-	E2RG62
ENSCAFT00000044961	-	3081	-	ENSCAFP00000037859	1026 (aa)	-	J9NX47

Gene Model

Click here to download ENSCAFG00000010026's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000010026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000010026	SMARCAD1	51	37.843	ENSCAFG00000008090	HELLS	64	37.843
ENSCAFG00000010026	SMARCAD1	51	34.981	ENSCAFG00000010944	CHD1L	51	34.981
ENSCAFG00000010026	SMARCAD1	50	33.774	ENSCAFG00000018673	SMARCA1	50	34.082

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000010026	SMARCAD1	100	96.887	ENSG00000163104	SMARCAD1	100	98.658	Homo_sapiens
ENSCAFG00000010026	SMARCAD1	98	63.068	ENSAPOG00000011446	smarcad1a	95	62.535	Acanthochromis_polyacanthus
ENSCAFG00000010026	SMARCAD1	100	99.125	ENSAMEG00000005844	SMARCAD1	100	99.125	Ailuropoda_melanoleuca
ENSCAFG00000010026	SMARCAD1	68	68.587	ENSACIG00000018326	smarcad1a	100	68.587	Amphilophus_citrinellus
ENSCAFG00000010026	SMARCAD1	100	63.068	ENSAOCG00000019762	smarcad1a	96	62.396	Amphiprion_ocellaris
ENSCAFG00000010026	SMARCAD1	100	63.210	ENSAPEG00000003889	smarcad1a	96	62.674	Amphiprion_percula
ENSCAFG00000010026	SMARCAD1	87	62.921	ENSATEG00000015608	smarcad1a	93	62.921	Anabas_testudineus
ENSCAFG00000010026	SMARCAD1	94	71.737	ENSAPLG00000004630	SMARCAD1	100	72.456	Anas_platyrhynchos
ENSCAFG00000010026	SMARCAD1	100	69.855	ENSACAG00000013554	SMARCAD1	100	70.242	Anolis_carolinensis
ENSCAFG00000010026	SMARCAD1	100	96.311	ENSANAG00000020488	SMARCAD1	99	97.348	Aotus_nancymaae
ENSCAFG00000010026	SMARCAD1	98	62.518	ENSACLG00000017063	smarcad1a	98	61.317	Astatotilapia_calliptera
ENSCAFG00000010026	SMARCAD1	69	60.815	ENSAMXG00000015470	smarcad1a	98	60.815	Astyanax_mexicanus
ENSCAFG00000010026	SMARCAD1	79	59.008	ENSAMXG00000019130	smarcad1b	85	60.150	Astyanax_mexicanus
ENSCAFG00000010026	SMARCAD1	100	96.699	ENSBTAG00000017061	SMARCAD1	100	96.699	Bos_taurus
ENSCAFG00000010026	SMARCAD1	61	43.036	WBGene00010845	M03C11.8	63	43.012	Caenorhabditis_elegans
ENSCAFG00000010026	SMARCAD1	100	96.595	ENSCJAG00000006778	SMARCAD1	100	96.595	Callithrix_jacchus
ENSCAFG00000010026	SMARCAD1	87	99.888	ENSCAFG00020003994	SMARCAD1	100	99.888	Canis_lupus_dingo
ENSCAFG00000010026	SMARCAD1	100	97.082	ENSCHIG00000012905	SMARCAD1	100	97.082	Capra_hircus
ENSCAFG00000010026	SMARCAD1	100	96.693	ENSTSYG00000002706	SMARCAD1	100	96.693	Carlito_syrichta
ENSCAFG00000010026	SMARCAD1	91	77.837	ENSCAPG00000016744	SMARCAD1	96	78.602	Cavia_aperea
ENSCAFG00000010026	SMARCAD1	100	93.907	ENSCPOG00000011398	SMARCAD1	100	93.907	Cavia_porcellus
ENSCAFG00000010026	SMARCAD1	100	96.595	ENSCCAG00000022264	SMARCAD1	100	98.658	Cebus_capucinus
ENSCAFG00000010026	SMARCAD1	100	96.595	ENSCATG00000035663	SMARCAD1	99	97.638	Cercocebus_atys
ENSCAFG00000010026	SMARCAD1	82	97.860	ENSCSAG00000004186	SMARCAD1	100	97.860	Chlorocebus_sabaeus
ENSCAFG00000010026	SMARCAD1	100	73.634	ENSCPBG00000013203	SMARCAD1	100	73.896	Chrysemys_picta_bellii
ENSCAFG00000010026	SMARCAD1	64	50.000	ENSCING00000001688	-	99	50.000	Ciona_intestinalis
ENSCAFG00000010026	SMARCAD1	100	96.401	ENSCANG00000003556	SMARCAD1	100	98.658	Colobus_angolensis_palliatus
ENSCAFG00000010026	SMARCAD1	100	92.510	ENSCGRG00001015056	Smarcad1	100	92.510	Cricetulus_griseus_chok1gshd
ENSCAFG00000010026	SMARCAD1	100	92.510	ENSCGRG00000014087	Smarcad1	100	92.510	Cricetulus_griseus_crigri
ENSCAFG00000010026	SMARCAD1	100	62.245	ENSCSEG00000017903	smarcad1a	98	60.000	Cynoglossus_semilaevis
ENSCAFG00000010026	SMARCAD1	96	60.545	ENSCSEG00000014419	-	91	58.904	Cynoglossus_semilaevis
ENSCAFG00000010026	SMARCAD1	100	49.208	ENSDARG00000014041	smarcad1a	92	55.617	Danio_rerio
ENSCAFG00000010026	SMARCAD1	78	58.549	ENSDARG00000073721	smarcad1b	82	59.772	Danio_rerio
ENSCAFG00000010026	SMARCAD1	100	96.401	ENSDNOG00000000806	-	100	96.401	Dasypus_novemcinctus
ENSCAFG00000010026	SMARCAD1	100	92.047	ENSDORG00000012331	Smarcad1	100	92.047	Dipodomys_ordii
ENSCAFG00000010026	SMARCAD1	63	45.692	FBgn0032157	Etl1	86	43.265	Drosophila_melanogaster
ENSCAFG00000010026	SMARCAD1	61	46.178	ENSEBUG00000003969	smarcad1a	96	46.353	Eptatretus_burgeri
ENSCAFG00000010026	SMARCAD1	100	97.957	ENSEASG00005012382	SMARCAD1	100	97.957	Equus_asinus_asinus
ENSCAFG00000010026	SMARCAD1	100	97.957	ENSECAG00000011562	SMARCAD1	100	97.957	Equus_caballus
ENSCAFG00000010026	SMARCAD1	100	51.721	ENSELUG00000018535	smarcad1a	100	51.022	Esox_lucius
ENSCAFG00000010026	SMARCAD1	79	56.848	ENSELUG00000019154	smarcad1b	79	59.335	Esox_lucius
ENSCAFG00000010026	SMARCAD1	100	98.054	ENSFCAG00000003958	SMARCAD1	100	99.161	Felis_catus
ENSCAFG00000010026	SMARCAD1	100	67.274	ENSFALG00000006089	SMARCAD1	100	67.466	Ficedula_albicollis
ENSCAFG00000010026	SMARCAD1	100	95.136	ENSFDAG00000017027	SMARCAD1	100	95.136	Fukomys_damarensis
ENSCAFG00000010026	SMARCAD1	94	65.471	ENSFHEG00000012778	smarcad1a	87	62.535	Fundulus_heteroclitus
ENSCAFG00000010026	SMARCAD1	84	58.180	ENSGMOG00000018995	smarcad1a	97	57.604	Gadus_morhua
ENSCAFG00000010026	SMARCAD1	77	73.198	ENSGALG00000037339	SMARCAD1	94	73.819	Gallus_gallus
ENSCAFG00000010026	SMARCAD1	90	66.509	ENSGAFG00000013498	smarcad1a	60	66.509	Gambusia_affinis
ENSCAFG00000010026	SMARCAD1	85	58.277	ENSGACG00000007327	smarcad1a	99	58.730	Gasterosteus_aculeatus
ENSCAFG00000010026	SMARCAD1	100	73.704	ENSGAGG00000008582	SMARCAD1	100	73.988	Gopherus_agassizii
ENSCAFG00000010026	SMARCAD1	100	96.984	ENSGGOG00000023001	SMARCAD1	100	96.984	Gorilla_gorilla
ENSCAFG00000010026	SMARCAD1	83	62.376	ENSHBUG00000011042	smarcad1a	89	61.180	Haplochromis_burtoni
ENSCAFG00000010026	SMARCAD1	100	94.859	ENSHGLG00000005070	SMARCAD1	100	94.859	Heterocephalus_glaber_female
ENSCAFG00000010026	SMARCAD1	100	94.859	ENSHGLG00100006812	SMARCAD1	100	94.859	Heterocephalus_glaber_male
ENSCAFG00000010026	SMARCAD1	99	64.075	ENSHCOG00000007848	smarcad1a	97	60.649	Hippocampus_comes
ENSCAFG00000010026	SMARCAD1	78	65.258	ENSIPUG00000000242	smarcad1a	97	60.809	Ictalurus_punctatus
ENSCAFG00000010026	SMARCAD1	81	56.940	ENSIPUG00000022817	smarcad1b	84	59.873	Ictalurus_punctatus
ENSCAFG00000010026	SMARCAD1	100	96.210	ENSSTOG00000001227	SMARCAD1	100	96.210	Ictidomys_tridecemlineatus
ENSCAFG00000010026	SMARCAD1	100	95.136	ENSJJAG00000022342	Smarcad1	100	95.136	Jaculus_jaculus
ENSCAFG00000010026	SMARCAD1	93	64.502	ENSKMAG00000021351	smarcad1a	91	61.142	Kryptolebias_marmoratus
ENSCAFG00000010026	SMARCAD1	78	65.970	ENSLBEG00000008088	smarcad1a	78	65.970	Labrus_bergylta
ENSCAFG00000010026	SMARCAD1	100	54.762	ENSLOCG00000012909	smarcad1a	100	55.908	Lepisosteus_oculatus
ENSCAFG00000010026	SMARCAD1	100	94.747	ENSLAFG00000000040	SMARCAD1	100	94.747	Loxodonta_africana
ENSCAFG00000010026	SMARCAD1	100	96.595	ENSMFAG00000042606	SMARCAD1	99	97.743	Macaca_fascicularis
ENSCAFG00000010026	SMARCAD1	86	97.743	ENSMMUG00000022242	SMARCAD1	99	97.743	Macaca_mulatta
ENSCAFG00000010026	SMARCAD1	100	96.498	ENSMNEG00000038117	SMARCAD1	100	98.490	Macaca_nemestrina
ENSCAFG00000010026	SMARCAD1	100	96.498	ENSMLEG00000038333	SMARCAD1	100	98.658	Mandrillus_leucophaeus
ENSCAFG00000010026	SMARCAD1	82	63.561	ENSMAMG00000000933	smarcad1a	83	63.384	Mastacembelus_armatus
ENSCAFG00000010026	SMARCAD1	92	66.615	ENSMZEG00005005203	smarcad1a	100	49.818	Maylandia_zebra
ENSCAFG00000010026	SMARCAD1	94	64.748	ENSMGAG00000005577	SMARCAD1	100	64.748	Meleagris_gallopavo
ENSCAFG00000010026	SMARCAD1	100	92.315	ENSMAUG00000008417	Smarcad1	100	92.315	Mesocricetus_auratus
ENSCAFG00000010026	SMARCAD1	100	95.728	ENSMICG00000009746	SMARCAD1	100	95.728	Microcebus_murinus
ENSCAFG00000010026	SMARCAD1	100	92.023	ENSMOCG00000017142	Smarcad1	100	92.023	Microtus_ochrogaster
ENSCAFG00000010026	SMARCAD1	77	58.868	ENSMMOG00000000275	smarcad1a	92	64.978	Mola_mola
ENSCAFG00000010026	SMARCAD1	100	81.503	ENSMODG00000019268	SMARCAD1	100	81.503	Monodelphis_domestica
ENSCAFG00000010026	SMARCAD1	94	93.042	MGP_CAROLIEiJ_G0028458	-	77	93.042	Mus_caroli
ENSCAFG00000010026	SMARCAD1	100	91.059	ENSMUSG00000029920	Smarcad1	100	91.156	Mus_musculus
ENSCAFG00000010026	SMARCAD1	100	91.448	MGP_PahariEiJ_G0022198	Smarcad1	100	91.545	Mus_pahari
ENSCAFG00000010026	SMARCAD1	100	91.156	MGP_SPRETEiJ_G0029462	Smarcad1	100	91.254	Mus_spretus
ENSCAFG00000010026	SMARCAD1	100	99.125	ENSMPUG00000002111	SMARCAD1	100	99.125	Mustela_putorius_furo
ENSCAFG00000010026	SMARCAD1	100	93.689	ENSMLUG00000000425	SMARCAD1	100	93.689	Myotis_lucifugus
ENSCAFG00000010026	SMARCAD1	100	93.191	ENSNGAG00000000810	Smarcad1	100	93.191	Nannospalax_galili
ENSCAFG00000010026	SMARCAD1	66	63.127	ENSNBRG00000012749	smarcad1a	85	61.236	Neolamprologus_brichardi
ENSCAFG00000010026	SMARCAD1	100	96.984	ENSNLEG00000014225	SMARCAD1	100	98.658	Nomascus_leucogenys
ENSCAFG00000010026	SMARCAD1	100	93.981	ENSODEG00000004334	SMARCAD1	100	93.981	Octodon_degus
ENSCAFG00000010026	SMARCAD1	63	66.049	ENSONIG00000015059	smarcad1a	100	52.174	Oreochromis_niloticus
ENSCAFG00000010026	SMARCAD1	80	84.903	ENSOANG00000013764	SMARCAD1	100	84.903	Ornithorhynchus_anatinus
ENSCAFG00000010026	SMARCAD1	100	96.012	ENSOCUG00000017283	SMARCAD1	100	96.012	Oryctolagus_cuniculus
ENSCAFG00000010026	SMARCAD1	93	65.361	ENSORLG00000004869	smarcad1a	93	61.602	Oryzias_latipes
ENSCAFG00000010026	SMARCAD1	93	65.361	ENSORLG00020020569	smarcad1a	93	61.570	Oryzias_latipes_hni
ENSCAFG00000010026	SMARCAD1	93	65.211	ENSORLG00015009045	smarcad1a	92	61.464	Oryzias_latipes_hsok
ENSCAFG00000010026	SMARCAD1	65	64.962	ENSOMEG00000023032	smarcad1a	68	61.073	Oryzias_melastigma
ENSCAFG00000010026	SMARCAD1	100	95.049	ENSOGAG00000011444	SMARCAD1	100	95.049	Otolemur_garnettii
ENSCAFG00000010026	SMARCAD1	100	96.984	ENSOARG00000017851	SMARCAD1	100	96.984	Ovis_aries
ENSCAFG00000010026	SMARCAD1	100	97.082	ENSPPAG00000035715	SMARCAD1	100	97.082	Pan_paniscus
ENSCAFG00000010026	SMARCAD1	100	98.054	ENSPPRG00000024756	SMARCAD1	100	99.161	Panthera_pardus
ENSCAFG00000010026	SMARCAD1	100	97.864	ENSPTIG00000017868	SMARCAD1	100	97.864	Panthera_tigris_altaica
ENSCAFG00000010026	SMARCAD1	100	96.984	ENSPTRG00000023126	SMARCAD1	100	98.658	Pan_troglodytes
ENSCAFG00000010026	SMARCAD1	100	95.344	ENSPANG00000019757	SMARCAD1	100	95.344	Papio_anubis
ENSCAFG00000010026	SMARCAD1	100	72.945	ENSPSIG00000010255	SMARCAD1	100	73.136	Pelodiscus_sinensis
ENSCAFG00000010026	SMARCAD1	62	64.697	ENSPMGG00000010735	smarcad1a	95	63.166	Periophthalmus_magnuspinnatus
ENSCAFG00000010026	SMARCAD1	100	77.326	ENSPEMG00000001854	Smarcad1	100	78.113	Peromyscus_maniculatus_bairdii
ENSCAFG00000010026	SMARCAD1	99	47.228	ENSPMAG00000003516	smarcad1a	99	47.288	Petromyzon_marinus
ENSCAFG00000010026	SMARCAD1	77	87.611	ENSPCIG00000008137	SMARCAD1	98	89.011	Phascolarctos_cinereus
ENSCAFG00000010026	SMARCAD1	94	66.459	ENSPFOG00000019116	smarcad1a	89	62.064	Poecilia_formosa
ENSCAFG00000010026	SMARCAD1	94	66.303	ENSPLAG00000000108	smarcad1a	89	61.925	Poecilia_latipinna
ENSCAFG00000010026	SMARCAD1	94	66.459	ENSPMEG00000009155	smarcad1a	89	62.064	Poecilia_mexicana
ENSCAFG00000010026	SMARCAD1	99	63.873	ENSPREG00000018185	smarcad1a	94	62.448	Poecilia_reticulata
ENSCAFG00000010026	SMARCAD1	100	96.214	ENSPPYG00000014935	SMARCAD1	100	96.214	Pongo_abelii
ENSCAFG00000010026	SMARCAD1	83	96.585	ENSPCOG00000020478	SMARCAD1	91	96.585	Propithecus_coquereli
ENSCAFG00000010026	SMARCAD1	100	95.534	ENSPVAG00000001760	SMARCAD1	100	95.534	Pteropus_vampyrus
ENSCAFG00000010026	SMARCAD1	67	62.029	ENSPNYG00000010087	smarcad1a	85	60.815	Pundamilia_nyererei
ENSCAFG00000010026	SMARCAD1	100	50.852	ENSPNAG00000001663	smarcad1a	100	50.279	Pygocentrus_nattereri
ENSCAFG00000010026	SMARCAD1	81	57.888	ENSPNAG00000010099	smarcad1b	84	60.252	Pygocentrus_nattereri
ENSCAFG00000010026	SMARCAD1	100	92.323	ENSRNOG00000006391	Smarcad1	100	92.323	Rattus_norvegicus
ENSCAFG00000010026	SMARCAD1	100	96.595	ENSRBIG00000041989	SMARCAD1	100	96.595	Rhinopithecus_bieti
ENSCAFG00000010026	SMARCAD1	100	96.595	ENSRROG00000035309	SMARCAD1	100	96.595	Rhinopithecus_roxellana
ENSCAFG00000010026	SMARCAD1	100	96.595	ENSSBOG00000032114	SMARCAD1	100	98.658	Saimiri_boliviensis_boliviensis
ENSCAFG00000010026	SMARCAD1	100	82.466	ENSSHAG00000001279	SMARCAD1	100	82.563	Sarcophilus_harrisii
ENSCAFG00000010026	SMARCAD1	74	57.642	ENSSFOG00015020909	smarcad1a	100	57.642	Scleropages_formosus
ENSCAFG00000010026	SMARCAD1	100	50.047	ENSSFOG00015016814	smarcad1b	100	50.046	Scleropages_formosus
ENSCAFG00000010026	SMARCAD1	81	63.830	ENSSMAG00000001326	smarcad1a	97	62.791	Scophthalmus_maximus
ENSCAFG00000010026	SMARCAD1	68	62.926	ENSSDUG00000022338	smarcad1a	84	62.396	Seriola_dumerili
ENSCAFG00000010026	SMARCAD1	92	66.459	ENSSLDG00000024986	smarcad1a	90	66.459	Seriola_lalandi_dorsalis
ENSCAFG00000010026	SMARCAD1	58	84.590	ENSSPUG00000004633	SMARCAD1	100	84.590	Sphenodon_punctatus
ENSCAFG00000010026	SMARCAD1	97	63.793	ENSSPAG00000001970	smarcad1a	96	62.622	Stegastes_partitus
ENSCAFG00000010026	SMARCAD1	100	97.665	ENSSSCG00000009193	SMARCAD1	100	99.049	Sus_scrofa
ENSCAFG00000010026	SMARCAD1	76	77.679	ENSTGUG00000003127	SMARCAD1	100	77.934	Taeniopygia_guttata
ENSCAFG00000010026	SMARCAD1	85	57.732	ENSTNIG00000017585	smarcad1a	99	57.732	Tetraodon_nigroviridis
ENSCAFG00000010026	SMARCAD1	91	97.024	ENSTBEG00000002789	SMARCAD1	91	97.024	Tupaia_belangeri
ENSCAFG00000010026	SMARCAD1	98	96.521	ENSTTRG00000000226	SMARCAD1	100	96.521	Tursiops_truncatus
ENSCAFG00000010026	SMARCAD1	100	99.027	ENSUAMG00000022262	SMARCAD1	100	99.027	Ursus_americanus
ENSCAFG00000010026	SMARCAD1	100	98.930	ENSUMAG00000004549	SMARCAD1	100	98.930	Ursus_maritimus
ENSCAFG00000010026	SMARCAD1	100	99.610	ENSVVUG00000007271	SMARCAD1	100	99.610	Vulpes_vulpes
ENSCAFG00000010026	SMARCAD1	84	66.023	ENSXETG00000019214	smarcad1	100	65.909	Xenopus_tropicalis
ENSCAFG00000010026	SMARCAD1	82	56.153	ENSXCOG00000005232	smarcad1a	94	53.963	Xiphophorus_couchianus
ENSCAFG00000010026	SMARCAD1	94	66.303	ENSXMAG00000015350	smarcad1a	89	61.732	Xiphophorus_maculatus