EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000010428 (Gene tree)
Gene ID: 478737
Gene Symbol: TDP2
Alias: -
Full Name: tyrosyl-DNA phosphodiesterase 2
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 17847 bases
Position: chr35:22689174-22707020
Accession: 47219
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000037566	Exo_endo_phos	PF03372.23	1.7e-08	1	1
ENSCAFP00000042706	Exo_endo_phos	PF03372.23	2.8e-08	1	1
ENSCAFP00000015328	Exo_endo_phos	PF03372.23	3.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000043671	-	5339	-	ENSCAFP00000037566	291 (aa)	-	J9NWM1
ENSCAFT00000016565	-	1071	XM_005640162	ENSCAFP00000015328	357 (aa)	-	F1PLM1
ENSCAFT00000044842	-	1026	-	ENSCAFP00000042706	342 (aa)	-	J9PAC3

Gene Model

Click here to download ENSCAFG00000010428's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000010428's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000010428	TDP2	99	85.294	ENSG00000111802	TDP2	92	87.814	Homo_sapiens
ENSCAFG00000010428	TDP2	88	53.876	ENSAPOG00000018379	-	90	53.876	Acanthochromis_polyacanthus
ENSCAFG00000010428	TDP2	96	95.357	ENSAMEG00000010230	TDP2	100	95.357	Ailuropoda_melanoleuca
ENSCAFG00000010428	TDP2	63	54.891	ENSAOCG00000010081	-	80	54.891	Amphiprion_ocellaris
ENSCAFG00000010428	TDP2	89	52.852	ENSAPEG00000004208	-	93	52.852	Amphiprion_percula
ENSCAFG00000010428	TDP2	93	48.540	ENSATEG00000010663	-	89	48.540	Anabas_testudineus
ENSCAFG00000010428	TDP2	96	68.345	ENSACAG00000002332	TDP2	98	62.674	Anolis_carolinensis
ENSCAFG00000010428	TDP2	100	84.795	ENSANAG00000020033	TDP2	94	84.795	Aotus_nancymaae
ENSCAFG00000010428	TDP2	96	47.917	ENSACLG00000016174	tdp2b	99	46.075	Astatotilapia_calliptera
ENSCAFG00000010428	TDP2	92	55.926	ENSACLG00000016148	tdp2b	95	55.926	Astatotilapia_calliptera
ENSCAFG00000010428	TDP2	94	48.188	ENSACLG00000016132	tdp2b	93	48.188	Astatotilapia_calliptera
ENSCAFG00000010428	TDP2	94	59.124	ENSAMXG00000011775	tdp2b	99	50.524	Astyanax_mexicanus
ENSCAFG00000010428	TDP2	93	50.000	ENSAMXG00000036549	tdp2a	91	49.286	Astyanax_mexicanus
ENSCAFG00000010428	TDP2	96	88.214	ENSBTAG00000000365	TDP2	100	80.495	Bos_taurus
ENSCAFG00000010428	TDP2	94	30.793	WBGene00013405	tdpt-1	84	30.514	Caenorhabditis_elegans
ENSCAFG00000010428	TDP2	100	84.503	ENSCJAG00000021963	-	99	80.223	Callithrix_jacchus
ENSCAFG00000010428	TDP2	100	85.380	ENSCJAG00000006074	TDP2	92	88.889	Callithrix_jacchus
ENSCAFG00000010428	TDP2	100	100.000	ENSCAFG00020009994	TDP2	100	100.000	Canis_lupus_dingo
ENSCAFG00000010428	TDP2	99	87.543	ENSCHIG00000015294	-	97	87.847	Capra_hircus
ENSCAFG00000010428	TDP2	96	88.129	ENSTSYG00000037199	TDP2	99	85.065	Carlito_syrichta
ENSCAFG00000010428	TDP2	96	91.367	ENSCPOG00000006390	TDP2	99	82.535	Cavia_porcellus
ENSCAFG00000010428	TDP2	100	85.965	ENSCCAG00000022734	TDP2	92	88.889	Cebus_capucinus
ENSCAFG00000010428	TDP2	99	85.294	ENSCATG00000022076	TDP2	91	88.129	Cercocebus_atys
ENSCAFG00000010428	TDP2	96	91.367	ENSCLAG00000002072	TDP2	99	82.817	Chinchilla_lanigera
ENSCAFG00000010428	TDP2	100	85.380	ENSCSAG00000007769	TDP2	96	85.380	Chlorocebus_sabaeus
ENSCAFG00000010428	TDP2	96	74.101	ENSCPBG00000006551	TDP2	91	66.573	Chrysemys_picta_bellii
ENSCAFG00000010428	TDP2	99	84.706	ENSCANG00000040122	TDP2	96	84.795	Colobus_angolensis_palliatus
ENSCAFG00000010428	TDP2	96	75.714	ENSCGRG00001000384	Tdp2	95	68.182	Cricetulus_griseus_chok1gshd
ENSCAFG00000010428	TDP2	96	75.899	ENSCGRG00000010250	Tdp2	97	67.330	Cricetulus_griseus_crigri
ENSCAFG00000010428	TDP2	98	53.666	ENSCVAG00000003114	tdp2b	95	53.666	Cyprinodon_variegatus
ENSCAFG00000010428	TDP2	84	49.388	ENSDARG00000069941	tdp2a	55	49.388	Danio_rerio
ENSCAFG00000010428	TDP2	95	56.338	ENSDARG00000035954	tdp2b	95	51.639	Danio_rerio
ENSCAFG00000010428	TDP2	100	82.456	ENSDNOG00000044082	TDP2	99	78.142	Dasypus_novemcinctus
ENSCAFG00000010428	TDP2	96	84.532	ENSETEG00000019096	TDP2	100	84.532	Echinops_telfairi
ENSCAFG00000010428	TDP2	97	50.175	ENSEBUG00000006535	tdp2a	74	44.795	Eptatretus_burgeri
ENSCAFG00000010428	TDP2	96	88.849	ENSEASG00005007656	TDP2	96	83.815	Equus_asinus_asinus
ENSCAFG00000010428	TDP2	96	88.849	ENSECAG00000014264	TDP2	96	83.815	Equus_caballus
ENSCAFG00000010428	TDP2	99	81.471	ENSEEUG00000010776	TDP2	94	81.579	Erinaceus_europaeus
ENSCAFG00000010428	TDP2	92	46.863	ENSELUG00000009321	tdp2a	85	46.520	Esox_lucius
ENSCAFG00000010428	TDP2	98	53.039	ENSELUG00000016449	tdp2b	95	53.039	Esox_lucius
ENSCAFG00000010428	TDP2	96	96.763	ENSFCAG00000025612	TDP2	96	90.173	Felis_catus
ENSCAFG00000010428	TDP2	96	63.309	ENSFALG00000004710	TDP2	99	56.267	Ficedula_albicollis
ENSCAFG00000010428	TDP2	98	86.364	ENSFDAG00000006512	TDP2	99	86.364	Fukomys_damarensis
ENSCAFG00000010428	TDP2	84	52.419	ENSFHEG00000013560	-	84	52.419	Fundulus_heteroclitus
ENSCAFG00000010428	TDP2	96	69.784	ENSGALG00000013637	TDP2	97	61.838	Gallus_gallus
ENSCAFG00000010428	TDP2	96	74.101	ENSGAGG00000002853	TDP2	90	66.384	Gopherus_agassizii
ENSCAFG00000010428	TDP2	99	85.000	ENSGGOG00000014237	TDP2	92	87.455	Gorilla_gorilla
ENSCAFG00000010428	TDP2	98	54.810	ENSHBUG00000002714	tdp2b	95	54.810	Haplochromis_burtoni
ENSCAFG00000010428	TDP2	71	58.654	ENSHBUG00000005421	-	87	58.373	Haplochromis_burtoni
ENSCAFG00000010428	TDP2	96	89.209	ENSHGLG00000008655	TDP2	99	80.618	Heterocephalus_glaber_female
ENSCAFG00000010428	TDP2	96	89.209	ENSHGLG00100019087	TDP2	99	80.618	Heterocephalus_glaber_male
ENSCAFG00000010428	TDP2	94	58.029	ENSIPUG00000013691	tdp2b	96	51.913	Ictalurus_punctatus
ENSCAFG00000010428	TDP2	98	70.423	ENSJJAG00000021685	Tdp2	97	65.205	Jaculus_jaculus
ENSCAFG00000010428	TDP2	94	50.542	ENSKMAG00000015485	-	88	50.542	Kryptolebias_marmoratus
ENSCAFG00000010428	TDP2	96	64.769	ENSLACG00000008852	TDP2	95	59.714	Latimeria_chalumnae
ENSCAFG00000010428	TDP2	95	60.507	ENSLOCG00000005817	tdp2b	98	60.507	Lepisosteus_oculatus
ENSCAFG00000010428	TDP2	96	87.050	ENSLAFG00000002567	TDP2	99	81.375	Loxodonta_africana
ENSCAFG00000010428	TDP2	99	85.588	ENSMFAG00000045296	TDP2	96	85.673	Macaca_fascicularis
ENSCAFG00000010428	TDP2	99	85.588	ENSMMUG00000009803	TDP2	96	85.673	Macaca_mulatta
ENSCAFG00000010428	TDP2	99	85.588	ENSMNEG00000038003	TDP2	96	85.673	Macaca_nemestrina
ENSCAFG00000010428	TDP2	96	88.172	ENSMLEG00000028883	TDP2	96	85.088	Mandrillus_leucophaeus
ENSCAFG00000010428	TDP2	98	54.810	ENSMAMG00000013654	tdp2b	94	54.810	Mastacembelus_armatus
ENSCAFG00000010428	TDP2	96	46.181	ENSMZEG00005004103	tdp2b	96	46.181	Maylandia_zebra
ENSCAFG00000010428	TDP2	84	52.632	ENSMZEG00005004055	tdp2b	82	52.632	Maylandia_zebra
ENSCAFG00000010428	TDP2	93	49.635	ENSMZEG00005004126	tdp2b	99	46.416	Maylandia_zebra
ENSCAFG00000010428	TDP2	85	46.774	ENSMZEG00005003980	-	81	46.586	Maylandia_zebra
ENSCAFG00000010428	TDP2	91	56.391	ENSMZEG00005004077	tdp2b	98	52.941	Maylandia_zebra
ENSCAFG00000010428	TDP2	90	54.717	ENSMZEG00005004153	tdp2b	93	54.924	Maylandia_zebra
ENSCAFG00000010428	TDP2	98	54.227	ENSMZEG00005003950	tdp2b	95	54.227	Maylandia_zebra
ENSCAFG00000010428	TDP2	96	71.223	ENSMGAG00000008014	TDP2	96	63.128	Meleagris_gallopavo
ENSCAFG00000010428	TDP2	96	75.000	ENSMAUG00000014451	Tdp2	94	67.622	Mesocricetus_auratus
ENSCAFG00000010428	TDP2	100	86.257	ENSMICG00000000039	TDP2	97	87.108	Microcebus_murinus
ENSCAFG00000010428	TDP2	96	75.357	ENSMOCG00000002823	Tdp2	94	68.195	Microtus_ochrogaster
ENSCAFG00000010428	TDP2	82	73.333	ENSMODG00000011653	TDP2	95	65.916	Monodelphis_domestica
ENSCAFG00000010428	TDP2	84	53.659	ENSMALG00000005368	-	83	53.659	Monopterus_albus
ENSCAFG00000010428	TDP2	96	75.357	MGP_CAROLIEiJ_G0018354	Tdp2	91	68.529	Mus_caroli
ENSCAFG00000010428	TDP2	96	76.071	ENSMUSG00000035958	Tdp2	91	69.118	Mus_musculus
ENSCAFG00000010428	TDP2	96	74.643	MGP_PahariEiJ_G0019417	Tdp2	91	67.059	Mus_pahari
ENSCAFG00000010428	TDP2	96	76.071	MGP_SPRETEiJ_G0019220	Tdp2	96	66.111	Mus_spretus
ENSCAFG00000010428	TDP2	96	96.403	ENSMPUG00000004516	TDP2	100	87.222	Mustela_putorius_furo
ENSCAFG00000010428	TDP2	96	83.154	ENSMLUG00000013506	TDP2	97	75.284	Myotis_lucifugus
ENSCAFG00000010428	TDP2	96	70.251	ENSNGAG00000001375	Tdp2	94	62.751	Nannospalax_galili
ENSCAFG00000010428	TDP2	100	86.257	ENSNLEG00000002447	TDP2	100	82.535	Nomascus_leucogenys
ENSCAFG00000010428	TDP2	96	86.429	ENSOPRG00000016299	TDP2	98	81.871	Ochotona_princeps
ENSCAFG00000010428	TDP2	98	88.462	ENSODEG00000014018	TDP2	97	88.462	Octodon_degus
ENSCAFG00000010428	TDP2	96	89.928	ENSOCUG00000013773	TDP2	94	85.380	Oryctolagus_cuniculus
ENSCAFG00000010428	TDP2	90	46.970	ENSORLG00000001661	-	96	46.970	Oryzias_latipes
ENSCAFG00000010428	TDP2	90	46.970	ENSORLG00020004634	-	96	46.970	Oryzias_latipes_hni
ENSCAFG00000010428	TDP2	91	42.697	ENSORLG00015008190	-	97	42.697	Oryzias_latipes_hsok
ENSCAFG00000010428	TDP2	95	47.653	ENSOMEG00000015899	-	96	46.488	Oryzias_melastigma
ENSCAFG00000010428	TDP2	100	82.456	ENSOGAG00000025303	TDP2	96	79.772	Otolemur_garnettii
ENSCAFG00000010428	TDP2	99	85.588	ENSPPAG00000029023	TDP2	92	88.087	Pan_paniscus
ENSCAFG00000010428	TDP2	96	96.043	ENSPPRG00000015398	TDP2	96	89.595	Panthera_pardus
ENSCAFG00000010428	TDP2	98	94.737	ENSPTIG00000018574	TDP2	97	94.737	Panthera_tigris_altaica
ENSCAFG00000010428	TDP2	99	85.588	ENSPTRG00000017778	TDP2	92	88.172	Pan_troglodytes
ENSCAFG00000010428	TDP2	99	85.000	ENSPANG00000017590	TDP2	96	85.088	Papio_anubis
ENSCAFG00000010428	TDP2	94	57.040	ENSPKIG00000006483	tdp2b	94	52.841	Paramormyrops_kingsleyae
ENSCAFG00000010428	TDP2	96	73.118	ENSPSIG00000004948	TDP2	96	73.118	Pelodiscus_sinensis
ENSCAFG00000010428	TDP2	96	76.071	ENSPEMG00000001788	Tdp2	94	68.481	Peromyscus_maniculatus_bairdii
ENSCAFG00000010428	TDP2	86	48.315	ENSPMAG00000001570	tdp2b	97	49.064	Petromyzon_marinus
ENSCAFG00000010428	TDP2	96	73.741	ENSPCIG00000007316	TDP2	89	67.941	Phascolarctos_cinereus
ENSCAFG00000010428	TDP2	85	49.200	ENSPFOG00000017990	-	90	49.200	Poecilia_formosa
ENSCAFG00000010428	TDP2	85	48.800	ENSPLAG00000019439	-	79	48.800	Poecilia_latipinna
ENSCAFG00000010428	TDP2	85	49.600	ENSPMEG00000010824	-	84	49.600	Poecilia_mexicana
ENSCAFG00000010428	TDP2	99	85.588	ENSPPYG00000016282	TDP2	87	85.673	Pongo_abelii
ENSCAFG00000010428	TDP2	99	87.021	ENSPCOG00000021415	TDP2	99	88.612	Propithecus_coquereli
ENSCAFG00000010428	TDP2	90	50.534	ENSPNYG00000011504	tdp2b	91	50.714	Pundamilia_nyererei
ENSCAFG00000010428	TDP2	61	50.562	ENSPNYG00000001944	-	72	50.000	Pundamilia_nyererei
ENSCAFG00000010428	TDP2	98	53.936	ENSPNYG00000011532	tdp2b	95	53.936	Pundamilia_nyererei
ENSCAFG00000010428	TDP2	93	49.474	ENSPNAG00000022162	tdp2a	77	48.013	Pygocentrus_nattereri
ENSCAFG00000010428	TDP2	96	74.820	ENSRNOG00000018246	Tdp2	92	68.035	Rattus_norvegicus
ENSCAFG00000010428	TDP2	99	85.000	ENSRBIG00000037119	TDP2	96	85.088	Rhinopithecus_bieti
ENSCAFG00000010428	TDP2	99	84.706	ENSRROG00000005025	TDP2	92	87.097	Rhinopithecus_roxellana
ENSCAFG00000010428	TDP2	100	86.257	ENSSBOG00000028734	TDP2	91	89.928	Saimiri_boliviensis_boliviensis
ENSCAFG00000010428	TDP2	96	74.460	ENSSHAG00000002506	TDP2	94	65.460	Sarcophilus_harrisii
ENSCAFG00000010428	TDP2	87	52.381	ENSSFOG00015011322	-	71	52.381	Scleropages_formosus
ENSCAFG00000010428	TDP2	96	79.211	ENSSARG00000013547	TDP2	100	79.211	Sorex_araneus
ENSCAFG00000010428	TDP2	99	65.043	ENSSPUG00000008288	TDP2	99	62.740	Sphenodon_punctatus
ENSCAFG00000010428	TDP2	96	89.568	ENSSSCG00000001092	TDP2	96	84.393	Sus_scrofa
ENSCAFG00000010428	TDP2	88	67.578	ENSTGUG00000009035	TDP2	98	67.578	Taeniopygia_guttata
ENSCAFG00000010428	TDP2	99	52.754	ENSTRUG00000014347	tdp2b	96	52.754	Takifugu_rubripes
ENSCAFG00000010428	TDP2	92	50.000	ENSTRUG00000012218	-	96	50.000	Takifugu_rubripes
ENSCAFG00000010428	TDP2	87	52.874	ENSTNIG00000010260	TDP2	99	52.874	Tetraodon_nigroviridis
ENSCAFG00000010428	TDP2	99	53.390	ENSTNIG00000017792	tdp2b	95	53.390	Tetraodon_nigroviridis
ENSCAFG00000010428	TDP2	96	90.647	ENSTTRG00000016376	TDP2	100	82.320	Tursiops_truncatus
ENSCAFG00000010428	TDP2	96	95.341	ENSUAMG00000025939	TDP2	100	85.000	Ursus_americanus
ENSCAFG00000010428	TDP2	99	94.810	ENSUMAG00000020111	TDP2	96	94.810	Ursus_maritimus
ENSCAFG00000010428	TDP2	96	67.143	ENSXETG00000014826	tdp2	95	61.582	Xenopus_tropicalis
ENSCAFG00000010428	TDP2	85	49.801	ENSXCOG00000010778	-	69	49.801	Xiphophorus_couchianus
ENSCAFG00000010428	TDP2	85	49.801	ENSXMAG00000022252	-	72	49.801	Xiphophorus_maculatus