EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000010621 (Gene tree)
Gene ID: 478423
Gene Symbol: RRP1B
Alias: -
Full Name: ribosomal RNA processing 1B
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 17870 bases
Position: chr31:37653072-37670941
Accession: 45766
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000015631	Nop52	PF05997.12	3.7e-61	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000016891	-	5170	XM_005638953	ENSCAFP00000015631	701 (aa)	XP_005639010	F1PS87

Gene Model

Click here to download ENSCAFG00000010621's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000010621's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000010621	RRP1B	53	50.398	ENSG00000160214	RRP1	72	53.687	Homo_sapiens
ENSCAFG00000010621	RRP1B	99	69.081	ENSG00000160208	RRP1B	94	68.245	Homo_sapiens
ENSCAFG00000010621	RRP1B	73	90.000	ENSAMEG00000011401	RRP1B	74	90.000	Ailuropoda_melanoleuca
ENSCAFG00000010621	RRP1B	56	51.351	ENSAOCG00000017894	-	87	47.945	Amphiprion_ocellaris
ENSCAFG00000010621	RRP1B	61	47.967	ENSATEG00000005045	-	50	42.813	Anabas_testudineus
ENSCAFG00000010621	RRP1B	99	43.879	ENSACAG00000017851	RRP1B	90	43.148	Anolis_carolinensis
ENSCAFG00000010621	RRP1B	99	68.245	ENSANAG00000034889	RRP1B	94	67.827	Aotus_nancymaae
ENSCAFG00000010621	RRP1B	99	65.922	ENSBTAG00000017418	RRP1B	94	65.363	Bos_taurus
ENSCAFG00000010621	RRP1B	99	66.435	ENSCJAG00000017077	RRP1B	94	66.017	Callithrix_jacchus
ENSCAFG00000010621	RRP1B	99	97.842	ENSCAFG00020018901	RRP1B	94	97.842	Canis_lupus_dingo
ENSCAFG00000010621	RRP1B	99	66.573	ENSCHIG00000021519	RRP1B	94	66.527	Capra_hircus
ENSCAFG00000010621	RRP1B	99	58.757	ENSCPOG00000002396	RRP1B	100	57.391	Cavia_porcellus
ENSCAFG00000010621	RRP1B	99	68.245	ENSCCAG00000029384	RRP1B	94	67.688	Cebus_capucinus
ENSCAFG00000010621	RRP1B	53	48.541	ENSCCAG00000029828	RRP1	72	51.327	Cebus_capucinus
ENSCAFG00000010621	RRP1B	99	68.663	ENSCATG00000017423	RRP1B	94	68.384	Cercocebus_atys
ENSCAFG00000010621	RRP1B	99	58.847	ENSCLAG00000005622	RRP1B	94	59.115	Chinchilla_lanigera
ENSCAFG00000010621	RRP1B	99	68.802	ENSCSAG00000007961	RRP1B	94	67.967	Chlorocebus_sabaeus
ENSCAFG00000010621	RRP1B	99	49.864	ENSCPBG00000010310	RRP1B	98	49.171	Chrysemys_picta_bellii
ENSCAFG00000010621	RRP1B	99	67.688	ENSCANG00000040952	RRP1B	94	66.852	Colobus_angolensis_palliatus
ENSCAFG00000010621	RRP1B	99	60.508	ENSCGRG00001023882	-	94	59.605	Cricetulus_griseus_chok1gshd
ENSCAFG00000010621	RRP1B	99	60.508	ENSCGRG00001010889	-	94	59.605	Cricetulus_griseus_chok1gshd
ENSCAFG00000010621	RRP1B	99	60.508	ENSCGRG00000001553	Rrp1b	97	59.577	Cricetulus_griseus_crigri
ENSCAFG00000010621	RRP1B	57	52.747	ENSCSEG00000020711	-	71	49.451	Cynoglossus_semilaevis
ENSCAFG00000010621	RRP1B	99	60.972	ENSDNOG00000032774	RRP1B	94	60.112	Dasypus_novemcinctus
ENSCAFG00000010621	RRP1B	61	45.727	ENSDNOG00000019880	RRP1	73	52.786	Dasypus_novemcinctus
ENSCAFG00000010621	RRP1B	98	58.228	ENSDORG00000005496	Rrp1b	100	58.228	Dipodomys_ordii
ENSCAFG00000010621	RRP1B	99	57.024	ENSETEG00000019489	RRP1B	94	56.399	Echinops_telfairi
ENSCAFG00000010621	RRP1B	99	73.669	ENSEASG00005001687	RRP1B	94	73.249	Equus_asinus_asinus
ENSCAFG00000010621	RRP1B	99	73.109	ENSECAG00000018018	RRP1B	94	72.689	Equus_caballus
ENSCAFG00000010621	RRP1B	63	51.613	ENSELUG00000015885	-	81	44.054	Esox_lucius
ENSCAFG00000010621	RRP1B	99	76.346	ENSFCAG00000010272	RRP1B	94	75.779	Felis_catus
ENSCAFG00000010621	RRP1B	99	61.582	ENSFDAG00000010899	RRP1B	94	61.441	Fukomys_damarensis
ENSCAFG00000010621	RRP1B	63	41.892	ENSFDAG00000013728	RRP1	75	46.571	Fukomys_damarensis
ENSCAFG00000010621	RRP1B	58	50.526	ENSFHEG00000016314	-	51	51.579	Fundulus_heteroclitus
ENSCAFG00000010621	RRP1B	61	45.872	ENSGMOG00000001953	-	63	45.872	Gadus_morhua
ENSCAFG00000010621	RRP1B	73	56.471	ENSGALG00000035696	RRP1B	67	56.471	Gallus_gallus
ENSCAFG00000010621	RRP1B	64	48.837	ENSGACG00000001438	rrp1	68	45.714	Gasterosteus_aculeatus
ENSCAFG00000010621	RRP1B	99	47.684	ENSGAGG00000000375	RRP1B	94	48.556	Gopherus_agassizii
ENSCAFG00000010621	RRP1B	53	50.398	ENSGGOG00000000173	RRP1	72	53.687	Gorilla_gorilla
ENSCAFG00000010621	RRP1B	99	68.942	ENSGGOG00000012069	RRP1B	94	68.106	Gorilla_gorilla
ENSCAFG00000010621	RRP1B	99	61.453	ENSHGLG00000004968	RRP1B	95	60.615	Heterocephalus_glaber_female
ENSCAFG00000010621	RRP1B	82	66.761	ENSHGLG00100002232	RRP1B	99	55.210	Heterocephalus_glaber_male
ENSCAFG00000010621	RRP1B	63	44.531	ENSHCOG00000018388	-	58	42.188	Hippocampus_comes
ENSCAFG00000010621	RRP1B	55	46.316	ENSIPUG00000000673	-	64	43.195	Ictalurus_punctatus
ENSCAFG00000010621	RRP1B	53	48.294	ENSSTOG00000011116	RRP1	74	51.183	Ictidomys_tridecemlineatus
ENSCAFG00000010621	RRP1B	99	67.283	ENSSTOG00000011790	RRP1B	91	67.626	Ictidomys_tridecemlineatus
ENSCAFG00000010621	RRP1B	99	56.128	ENSJJAG00000021279	Rrp1b	94	56.328	Jaculus_jaculus
ENSCAFG00000010621	RRP1B	59	49.194	ENSKMAG00000005539	rrp1	66	47.200	Kryptolebias_marmoratus
ENSCAFG00000010621	RRP1B	66	52.273	ENSLACG00000017332	-	64	52.273	Latimeria_chalumnae
ENSCAFG00000010621	RRP1B	92	62.074	ENSLAFG00000000766	RRP1B	99	61.481	Loxodonta_africana
ENSCAFG00000010621	RRP1B	99	68.663	ENSMFAG00000039152	RRP1B	94	68.384	Macaca_fascicularis
ENSCAFG00000010621	RRP1B	99	66.158	ENSMMUG00000000104	RRP1B	94	65.881	Macaca_mulatta
ENSCAFG00000010621	RRP1B	58	47.281	ENSMNEG00000031210	RRP1	72	52.507	Macaca_nemestrina
ENSCAFG00000010621	RRP1B	99	68.384	ENSMNEG00000034269	RRP1B	94	68.106	Macaca_nemestrina
ENSCAFG00000010621	RRP1B	100	69.146	ENSMLEG00000040044	RRP1B	100	68.871	Mandrillus_leucophaeus
ENSCAFG00000010621	RRP1B	73	55.620	ENSMGAG00000014591	RRP1B	78	56.484	Meleagris_gallopavo
ENSCAFG00000010621	RRP1B	99	59.181	ENSMAUG00000021508	Rrp1b	94	58.898	Mesocricetus_auratus
ENSCAFG00000010621	RRP1B	50	48.767	ENSMICG00000004700	RRP1	78	48.767	Microcebus_murinus
ENSCAFG00000010621	RRP1B	99	69.510	ENSMICG00000004686	RRP1B	94	68.252	Microcebus_murinus
ENSCAFG00000010621	RRP1B	99	57.444	ENSMOCG00000001117	Rrp1b	94	57.303	Microtus_ochrogaster
ENSCAFG00000010621	RRP1B	99	62.465	ENSMODG00000021033	RRP1B	94	61.304	Monodelphis_domestica
ENSCAFG00000010621	RRP1B	99	57.123	MGP_CAROLIEiJ_G0021376	Rrp1b	94	57.264	Mus_caroli
ENSCAFG00000010621	RRP1B	99	55.837	ENSMUSG00000058392	Rrp1b	94	57.103	Mus_musculus
ENSCAFG00000010621	RRP1B	99	58.699	MGP_PahariEiJ_G0023695	Rrp1b	94	58.557	Mus_pahari
ENSCAFG00000010621	RRP1B	99	58.883	MGP_SPRETEiJ_G0022290	Rrp1b	94	59.026	Mus_spretus
ENSCAFG00000010621	RRP1B	87	77.850	ENSMPUG00000009810	RRP1B	99	77.687	Mustela_putorius_furo
ENSCAFG00000010621	RRP1B	99	70.483	ENSMLUG00000007738	RRP1B	94	69.475	Myotis_lucifugus
ENSCAFG00000010621	RRP1B	51	64.674	ENSMLUG00000017788	RRP1	89	42.398	Myotis_lucifugus
ENSCAFG00000010621	RRP1B	99	59.187	ENSNGAG00000021073	Rrp1b	94	59.664	Nannospalax_galili
ENSCAFG00000010621	RRP1B	99	67.908	ENSNLEG00000001490	RRP1B	94	67.765	Nomascus_leucogenys
ENSCAFG00000010621	RRP1B	53	50.133	ENSNLEG00000034734	RRP1	72	53.097	Nomascus_leucogenys
ENSCAFG00000010621	RRP1B	80	86.842	ENSMEUG00000003226	-	82	86.842	Notamacropus_eugenii
ENSCAFG00000010621	RRP1B	99	56.276	ENSODEG00000013177	RRP1B	94	55.853	Octodon_degus
ENSCAFG00000010621	RRP1B	64	37.445	ENSONIG00000004264	rrp1	99	36.088	Oreochromis_niloticus
ENSCAFG00000010621	RRP1B	99	50.207	ENSOANG00000006470	RRP1B	94	50.759	Ornithorhynchus_anatinus
ENSCAFG00000010621	RRP1B	99	53.147	ENSOCUG00000025931	RRP1B	100	51.904	Oryctolagus_cuniculus
ENSCAFG00000010621	RRP1B	63	46.032	ENSORLG00020007199	-	50	52.381	Oryzias_latipes_hni
ENSCAFG00000010621	RRP1B	63	45.600	ENSORLG00015004425	-	51	45.600	Oryzias_latipes_hsok
ENSCAFG00000010621	RRP1B	63	46.774	ENSOMEG00000016910	-	51	55.556	Oryzias_melastigma
ENSCAFG00000010621	RRP1B	97	61.029	ENSOGAG00000009872	RRP1B	76	76.501	Otolemur_garnettii
ENSCAFG00000010621	RRP1B	99	65.223	ENSOARG00000011314	RRP1B	100	65.175	Ovis_aries
ENSCAFG00000010621	RRP1B	100	69.146	ENSPPAG00000035319	RRP1B	99	68.340	Pan_paniscus
ENSCAFG00000010621	RRP1B	99	76.562	ENSPPRG00000010356	RRP1B	94	75.852	Panthera_pardus
ENSCAFG00000010621	RRP1B	82	83.251	ENSPTIG00000016894	RRP1B	96	83.251	Panthera_tigris_altaica
ENSCAFG00000010621	RRP1B	99	69.220	ENSPTRG00000013958	RRP1B	94	68.384	Pan_troglodytes
ENSCAFG00000010621	RRP1B	53	50.398	ENSPTRG00000013962	RRP1	72	53.687	Pan_troglodytes
ENSCAFG00000010621	RRP1B	99	69.081	ENSPANG00000011090	RRP1B	94	68.802	Papio_anubis
ENSCAFG00000010621	RRP1B	99	60.226	ENSPEMG00000022490	Rrp1b	94	59.264	Peromyscus_maniculatus_bairdii
ENSCAFG00000010621	RRP1B	99	61.859	ENSPCIG00000015513	RRP1B	94	61.389	Phascolarctos_cinereus
ENSCAFG00000010621	RRP1B	55	51.010	ENSPCIG00000015523	-	72	55.621	Phascolarctos_cinereus
ENSCAFG00000010621	RRP1B	99	34.960	ENSPFOG00000007424	-	94	34.914	Poecilia_formosa
ENSCAFG00000010621	RRP1B	53	50.000	ENSPPYG00000011474	RRP1	72	53.254	Pongo_abelii
ENSCAFG00000010621	RRP1B	99	69.081	ENSPPYG00000011470	RRP1B	94	68.245	Pongo_abelii
ENSCAFG00000010621	RRP1B	89	84.211	ENSPCAG00000013723	RRP1B	91	84.211	Procavia_capensis
ENSCAFG00000010621	RRP1B	99	69.198	ENSPCOG00000017927	RRP1B	94	67.927	Propithecus_coquereli
ENSCAFG00000010621	RRP1B	99	64.993	ENSPVAG00000001436	RRP1B	94	64.993	Pteropus_vampyrus
ENSCAFG00000010621	RRP1B	99	60.504	ENSRNOG00000001194	Rrp1b	94	60.619	Rattus_norvegicus
ENSCAFG00000010621	RRP1B	51	50.689	ENSRBIG00000032082	RRP1	72	53.392	Rhinopithecus_bieti
ENSCAFG00000010621	RRP1B	99	63.788	ENSRBIG00000041689	RRP1B	94	62.953	Rhinopithecus_bieti
ENSCAFG00000010621	RRP1B	99	68.384	ENSRROG00000031499	RRP1B	94	67.549	Rhinopithecus_roxellana
ENSCAFG00000010621	RRP1B	53	49.337	ENSRROG00000039799	RRP1	72	53.392	Rhinopithecus_roxellana
ENSCAFG00000010621	RRP1B	100	65.604	ENSSBOG00000034727	RRP1B	100	65.471	Saimiri_boliviensis_boliviensis
ENSCAFG00000010621	RRP1B	99	61.859	ENSSHAG00000017789	RRP1B	94	61.389	Sarcophilus_harrisii
ENSCAFG00000010621	RRP1B	61	49.580	ENSSFOG00015003932	-	56	48.739	Scleropages_formosus
ENSCAFG00000010621	RRP1B	63	46.875	ENSSMAG00000016847	-	77	42.154	Scophthalmus_maximus
ENSCAFG00000010621	RRP1B	65	48.837	ENSSDUG00000000551	-	53	44.413	Seriola_dumerili
ENSCAFG00000010621	RRP1B	72	63.380	ENSSARG00000003108	-	75	63.380	Sorex_araneus
ENSCAFG00000010621	RRP1B	99	42.318	ENSSPUG00000002834	RRP1B	94	42.183	Sphenodon_punctatus
ENSCAFG00000010621	RRP1B	99	62.588	ENSSSCG00000021698	RRP1B	99	62.588	Sus_scrofa
ENSCAFG00000010621	RRP1B	99	44.049	ENSTGUG00000005926	RRP1B	100	44.321	Taeniopygia_guttata
ENSCAFG00000010621	RRP1B	72	41.066	ENSTNIG00000005053	rrp1	77	40.798	Tetraodon_nigroviridis
ENSCAFG00000010621	RRP1B	80	81.065	ENSTBEG00000000422	RRP1B	100	81.065	Tupaia_belangeri
ENSCAFG00000010621	RRP1B	99	64.944	ENSTTRG00000000723	RRP1B	94	66.480	Tursiops_truncatus
ENSCAFG00000010621	RRP1B	99	79.424	ENSUAMG00000026765	RRP1B	94	79.137	Ursus_americanus
ENSCAFG00000010621	RRP1B	70	90.141	ENSUMAG00000025510	RRP1B	94	90.141	Ursus_maritimus
ENSCAFG00000010621	RRP1B	63	44.796	ENSUMAG00000025507	RRP1	79	48.428	Ursus_maritimus
ENSCAFG00000010621	RRP1B	100	98.291	ENSVVUG00000024509	RRP1B	100	98.291	Vulpes_vulpes
ENSCAFG00000010621	RRP1B	55	49.020	ENSXETG00000013683	rrp1b	83	41.221	Xenopus_tropicalis
ENSCAFG00000010621	RRP1B	64	41.935	ENSXMAG00000023123	-	59	43.114	Xiphophorus_maculatus