EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000010789 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 1518 bases
Position: chr27:17594080-17595597
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000038865	RtcB	PF01139.17	2.6e-137	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000017163	-	1518	-	ENSCAFP00000038865	505 (aa)	-	J9NZZ4

Gene Model

Click here to download ENSCAFG00000010789's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000010789's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000010789	-	100	95.644	ENSCAFG00000001785	RTCB	100	95.644

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000010789	-	100	95.446	ENSG00000100220	RTCB	100	95.446	Homo_sapiens
ENSCAFG00000010789	-	100	90.495	ENSAPOG00000006040	rtcb	100	90.495	Acanthochromis_polyacanthus
ENSCAFG00000010789	-	100	95.644	ENSAMEG00000016152	RTCB	100	95.644	Ailuropoda_melanoleuca
ENSCAFG00000010789	-	100	86.733	ENSACIG00000009083	rtcb	100	86.337	Amphilophus_citrinellus
ENSCAFG00000010789	-	100	90.693	ENSAOCG00000005662	rtcb	100	91.087	Amphiprion_ocellaris
ENSCAFG00000010789	-	100	90.693	ENSAPEG00000024701	rtcb	100	90.693	Amphiprion_percula
ENSCAFG00000010789	-	96	85.626	ENSAPEG00000024653	rtcb	100	85.626	Amphiprion_percula
ENSCAFG00000010789	-	100	90.297	ENSATEG00000000618	rtcb	100	90.297	Anabas_testudineus
ENSCAFG00000010789	-	100	89.595	ENSACAG00000014817	RTCB	100	89.595	Anolis_carolinensis
ENSCAFG00000010789	-	100	80.792	ENSANAG00000018191	-	91	80.792	Aotus_nancymaae
ENSCAFG00000010789	-	72	91.667	ENSANAG00000023724	-	84	91.667	Aotus_nancymaae
ENSCAFG00000010789	-	100	89.109	ENSACLG00000008367	rtcb	100	89.783	Astatotilapia_calliptera
ENSCAFG00000010789	-	100	90.297	ENSAMXG00000042320	rtcb	100	90.297	Astyanax_mexicanus
ENSCAFG00000010789	-	100	95.050	ENSBTAG00000011070	RTCB	100	95.050	Bos_taurus
ENSCAFG00000010789	-	100	69.307	WBGene00008877	rtcb-1	100	69.307	Caenorhabditis_elegans
ENSCAFG00000010789	-	100	95.050	ENSCJAG00000006128	RTCB	100	95.050	Callithrix_jacchus
ENSCAFG00000010789	-	100	95.644	ENSCAFG00020004890	-	100	95.644	Canis_lupus_dingo
ENSCAFG00000010789	-	87	99.318	ENSCAFG00020018953	-	99	99.318	Canis_lupus_dingo
ENSCAFG00000010789	-	100	95.248	ENSCHIG00000027009	-	100	95.248	Capra_hircus
ENSCAFG00000010789	-	100	94.653	ENSTSYG00000012320	RTCB	100	94.653	Carlito_syrichta
ENSCAFG00000010789	-	94	94.340	ENSCAPG00000011647	RTCB	96	94.340	Cavia_aperea
ENSCAFG00000010789	-	100	95.050	ENSCCAG00000000618	RTCB	100	95.050	Cebus_capucinus
ENSCAFG00000010789	-	100	95.050	ENSCATG00000033424	RTCB	100	95.050	Cercocebus_atys
ENSCAFG00000010789	-	100	94.851	ENSCLAG00000007997	RTCB	100	94.851	Chinchilla_lanigera
ENSCAFG00000010789	-	100	94.851	ENSCSAG00000008351	RTCB	100	94.851	Chlorocebus_sabaeus
ENSCAFG00000010789	-	100	81.386	ENSCHOG00000009123	RTCB	100	81.386	Choloepus_hoffmanni
ENSCAFG00000010789	-	100	92.079	ENSCPBG00000023184	RTCB	100	92.079	Chrysemys_picta_bellii
ENSCAFG00000010789	-	100	77.624	ENSCING00000003830	-	100	77.426	Ciona_intestinalis
ENSCAFG00000010789	-	100	78.020	ENSCSAVG00000008124	-	100	77.221	Ciona_savignyi
ENSCAFG00000010789	-	100	91.485	ENSCANG00000001891	RTCB	100	91.485	Colobus_angolensis_palliatus
ENSCAFG00000010789	-	100	95.248	ENSCGRG00001011173	Rtcb	100	95.248	Cricetulus_griseus_chok1gshd
ENSCAFG00000010789	-	93	94.692	ENSCGRG00000009587	-	96	94.692	Cricetulus_griseus_crigri
ENSCAFG00000010789	-	100	89.703	ENSCSEG00000003986	rtcb	100	89.703	Cynoglossus_semilaevis
ENSCAFG00000010789	-	82	89.183	ENSCVAG00000000569	rtcb	95	89.183	Cyprinodon_variegatus
ENSCAFG00000010789	-	100	89.901	ENSDARG00000101047	rtcb	100	89.901	Danio_rerio
ENSCAFG00000010789	-	80	94.074	ENSDNOG00000012425	RTCB	99	94.074	Dasypus_novemcinctus
ENSCAFG00000010789	-	100	94.455	ENSDORG00000010855	Rtcb	100	94.455	Dipodomys_ordii
ENSCAFG00000010789	-	99	81.511	FBgn0032781	RtcB	99	81.511	Drosophila_melanogaster
ENSCAFG00000010789	-	100	88.119	ENSETEG00000001988	RTCB	100	88.119	Echinops_telfairi
ENSCAFG00000010789	-	100	81.584	ENSEBUG00000014235	rtcb	100	81.584	Eptatretus_burgeri
ENSCAFG00000010789	-	100	95.248	ENSEASG00005019059	RTCB	100	95.248	Equus_asinus_asinus
ENSCAFG00000010789	-	100	95.248	ENSECAG00000023998	RTCB	100	95.248	Equus_caballus
ENSCAFG00000010789	-	89	86.353	ENSEEUG00000006251	RTCB	99	86.261	Erinaceus_europaeus
ENSCAFG00000010789	-	100	78.450	ENSELUG00000009275	rtcb	100	78.450	Esox_lucius
ENSCAFG00000010789	-	100	95.446	ENSFCAG00000026480	RTCB	100	95.446	Felis_catus
ENSCAFG00000010789	-	100	93.069	ENSFALG00000013334	RTCB	100	93.069	Ficedula_albicollis
ENSCAFG00000010789	-	100	95.248	ENSFDAG00000018150	RTCB	100	95.248	Fukomys_damarensis
ENSCAFG00000010789	-	100	90.297	ENSFHEG00000009595	rtcb	100	90.297	Fundulus_heteroclitus
ENSCAFG00000010789	-	100	87.525	ENSGMOG00000018882	rtcb	100	87.525	Gadus_morhua
ENSCAFG00000010789	-	100	92.871	ENSGALG00000012611	RTCB	100	92.871	Gallus_gallus
ENSCAFG00000010789	-	100	90.693	ENSGAFG00000004198	rtcb	100	90.693	Gambusia_affinis
ENSCAFG00000010789	-	100	89.505	ENSGACG00000000586	rtcb	100	89.505	Gasterosteus_aculeatus
ENSCAFG00000010789	-	93	91.489	ENSGAGG00000019133	RTCB	98	91.489	Gopherus_agassizii
ENSCAFG00000010789	-	100	95.446	ENSGGOG00000011402	RTCB	100	95.446	Gorilla_gorilla
ENSCAFG00000010789	-	100	89.109	ENSHBUG00000020571	rtcb	100	89.109	Haplochromis_burtoni
ENSCAFG00000010789	-	93	68.432	ENSHGLG00000001066	-	99	68.017	Heterocephalus_glaber_female
ENSCAFG00000010789	-	100	95.248	ENSHGLG00000004492	RTCB	100	95.248	Heterocephalus_glaber_female
ENSCAFG00000010789	-	100	95.248	ENSHGLG00100008965	RTCB	100	95.248	Heterocephalus_glaber_male
ENSCAFG00000010789	-	100	87.179	ENSHCOG00000006450	rtcb	100	87.179	Hippocampus_comes
ENSCAFG00000010789	-	100	90.099	ENSIPUG00000015443	rtcb	100	90.099	Ictalurus_punctatus
ENSCAFG00000010789	-	100	95.050	ENSSTOG00000003878	RTCB	100	95.050	Ictidomys_tridecemlineatus
ENSCAFG00000010789	-	100	94.455	ENSJJAG00000010667	Rtcb	100	94.455	Jaculus_jaculus
ENSCAFG00000010789	-	100	90.297	ENSKMAG00000013178	rtcb	100	90.297	Kryptolebias_marmoratus
ENSCAFG00000010789	-	100	89.703	ENSLBEG00000000214	rtcb	100	89.703	Labrus_bergylta
ENSCAFG00000010789	-	100	90.495	ENSLBEG00000010566	RTCB	100	90.495	Labrus_bergylta
ENSCAFG00000010789	-	100	91.089	ENSLACG00000013033	RTCB	100	91.089	Latimeria_chalumnae
ENSCAFG00000010789	-	100	90.297	ENSLOCG00000016515	rtcb	99	90.297	Lepisosteus_oculatus
ENSCAFG00000010789	-	100	94.257	ENSLAFG00000002082	RTCB	100	94.257	Loxodonta_africana
ENSCAFG00000010789	-	100	94.851	ENSMFAG00000034419	RTCB	100	94.851	Macaca_fascicularis
ENSCAFG00000010789	-	100	94.851	ENSMMUG00000006720	RTCB	100	94.851	Macaca_mulatta
ENSCAFG00000010789	-	100	94.851	ENSMNEG00000040669	RTCB	100	94.851	Macaca_nemestrina
ENSCAFG00000010789	-	100	95.050	ENSMLEG00000040505	RTCB	100	95.050	Mandrillus_leucophaeus
ENSCAFG00000010789	-	100	90.495	ENSMAMG00000020676	rtcb	100	90.495	Mastacembelus_armatus
ENSCAFG00000010789	-	100	89.109	ENSMZEG00005018942	rtcb	100	89.109	Maylandia_zebra
ENSCAFG00000010789	-	100	92.505	ENSMGAG00000012805	RTCB	100	92.505	Meleagris_gallopavo
ENSCAFG00000010789	-	60	94.681	ENSMAUG00000008301	Rtcb	100	94.681	Mesocricetus_auratus
ENSCAFG00000010789	-	100	76.040	ENSMICG00000036677	-	100	76.040	Microcebus_murinus
ENSCAFG00000010789	-	100	95.248	ENSMICG00000013303	-	100	95.248	Microcebus_murinus
ENSCAFG00000010789	-	100	94.851	ENSMOCG00000002440	Rtcb	100	94.851	Microtus_ochrogaster
ENSCAFG00000010789	-	100	90.297	ENSMMOG00000005987	rtcb	100	90.297	Mola_mola
ENSCAFG00000010789	-	100	93.861	ENSMODG00000001414	RTCB	100	93.861	Monodelphis_domestica
ENSCAFG00000010789	-	100	90.495	ENSMALG00000007603	rtcb	100	90.495	Monopterus_albus
ENSCAFG00000010789	-	100	94.851	MGP_CAROLIEiJ_G0015689	Rtcb	100	94.851	Mus_caroli
ENSCAFG00000010789	-	100	94.851	ENSMUSG00000001783	Rtcb	100	94.851	Mus_musculus
ENSCAFG00000010789	-	100	94.851	MGP_PahariEiJ_G0031396	Rtcb	100	94.851	Mus_pahari
ENSCAFG00000010789	-	100	94.851	MGP_SPRETEiJ_G0016507	Rtcb	100	94.851	Mus_spretus
ENSCAFG00000010789	-	100	95.644	ENSMPUG00000012285	RTCB	100	95.644	Mustela_putorius_furo
ENSCAFG00000010789	-	100	92.702	ENSMLUG00000007803	RTCB	100	92.702	Myotis_lucifugus
ENSCAFG00000010789	-	75	91.844	ENSNGAG00000005093	Rtcb	100	91.844	Nannospalax_galili
ENSCAFG00000010789	-	100	89.307	ENSNBRG00000017202	rtcb	100	89.307	Neolamprologus_brichardi
ENSCAFG00000010789	-	100	95.446	ENSNLEG00000004960	RTCB	100	95.446	Nomascus_leucogenys
ENSCAFG00000010789	-	100	69.307	ENSMEUG00000007809	-	100	69.307	Notamacropus_eugenii
ENSCAFG00000010789	-	73	93.921	ENSOPRG00000003488	RTCB	79	93.921	Ochotona_princeps
ENSCAFG00000010789	-	82	91.509	ENSODEG00000013033	-	100	91.509	Octodon_degus
ENSCAFG00000010789	-	100	63.366	ENSODEG00000005042	-	100	63.366	Octodon_degus
ENSCAFG00000010789	-	100	90.297	ENSONIG00000007474	rtcb	100	90.297	Oreochromis_niloticus
ENSCAFG00000010789	-	100	93.861	ENSOANG00000005524	RTCB	100	93.861	Ornithorhynchus_anatinus
ENSCAFG00000010789	-	93	95.106	ENSOCUG00000008270	RTCB	96	95.106	Oryctolagus_cuniculus
ENSCAFG00000010789	-	100	89.703	ENSORLG00000020093	rtcb	100	89.703	Oryzias_latipes
ENSCAFG00000010789	-	100	89.703	ENSORLG00020003706	rtcb	100	89.703	Oryzias_latipes_hni
ENSCAFG00000010789	-	100	89.901	ENSORLG00015002968	rtcb	100	89.901	Oryzias_latipes_hsok
ENSCAFG00000010789	-	100	89.505	ENSOMEG00000021278	rtcb	100	89.505	Oryzias_melastigma
ENSCAFG00000010789	-	100	94.851	ENSOGAG00000001425	RTCB	100	94.851	Otolemur_garnettii
ENSCAFG00000010789	-	100	95.248	ENSOARG00000018008	RTCB	100	95.248	Ovis_aries
ENSCAFG00000010789	-	100	95.446	ENSPPAG00000028667	RTCB	100	95.446	Pan_paniscus
ENSCAFG00000010789	-	100	95.446	ENSPPRG00000004038	RTCB	100	95.446	Panthera_pardus
ENSCAFG00000010789	-	94	90.526	ENSPTIG00000020499	RTCB	97	91.579	Panthera_tigris_altaica
ENSCAFG00000010789	-	100	95.446	ENSPTRG00000014287	RTCB	100	95.446	Pan_troglodytes
ENSCAFG00000010789	-	100	94.851	ENSPANG00000016035	RTCB	100	94.851	Papio_anubis
ENSCAFG00000010789	-	100	88.911	ENSPKIG00000001881	rtcb	100	88.911	Paramormyrops_kingsleyae
ENSCAFG00000010789	-	91	93.261	ENSPSIG00000011690	RTCB	100	93.261	Pelodiscus_sinensis
ENSCAFG00000010789	-	100	90.891	ENSPMGG00000016672	rtcb	100	90.891	Periophthalmus_magnuspinnatus
ENSCAFG00000010789	-	100	94.851	ENSPEMG00000019548	Rtcb	100	94.851	Peromyscus_maniculatus_bairdii
ENSCAFG00000010789	-	100	87.327	ENSPMAG00000005657	rtcb	100	87.327	Petromyzon_marinus
ENSCAFG00000010789	-	100	94.257	ENSPCIG00000009467	RTCB	100	94.257	Phascolarctos_cinereus
ENSCAFG00000010789	-	100	91.089	ENSPFOG00000003058	rtcb	100	91.089	Poecilia_formosa
ENSCAFG00000010789	-	100	90.891	ENSPLAG00000017663	rtcb	100	90.891	Poecilia_latipinna
ENSCAFG00000010789	-	100	91.089	ENSPMEG00000006227	rtcb	100	91.089	Poecilia_mexicana
ENSCAFG00000010789	-	100	90.693	ENSPREG00000018467	rtcb	100	90.693	Poecilia_reticulata
ENSCAFG00000010789	-	100	95.446	ENSPPYG00000011752	RTCB	100	95.446	Pongo_abelii
ENSCAFG00000010789	-	93	77.331	ENSPCAG00000013641	RTCB	100	77.331	Procavia_capensis
ENSCAFG00000010789	-	100	95.050	ENSPCOG00000017243	RTCB	100	95.050	Propithecus_coquereli
ENSCAFG00000010789	-	93	94.468	ENSPVAG00000002380	RTCB	100	94.468	Pteropus_vampyrus
ENSCAFG00000010789	-	100	89.109	ENSPNYG00000022760	rtcb	100	89.109	Pundamilia_nyererei
ENSCAFG00000010789	-	100	90.693	ENSPNAG00000009209	rtcb	100	90.693	Pygocentrus_nattereri
ENSCAFG00000010789	-	100	94.851	ENSRNOG00000004813	Rtcb	100	94.851	Rattus_norvegicus
ENSCAFG00000010789	-	100	86.588	ENSRBIG00000042090	RTCB	100	86.759	Rhinopithecus_bieti
ENSCAFG00000010789	-	100	90.891	ENSSBOG00000020085	-	100	90.891	Saimiri_boliviensis_boliviensis
ENSCAFG00000010789	-	94	94.726	ENSSHAG00000016277	RTCB	100	94.726	Sarcophilus_harrisii
ENSCAFG00000010789	-	100	88.911	ENSSFOG00015000763	rtcb	100	88.911	Scleropages_formosus
ENSCAFG00000010789	-	100	89.505	ENSSFOG00015011572	RTCB	100	89.505	Scleropages_formosus
ENSCAFG00000010789	-	100	86.733	ENSSMAG00000005096	rtcb	100	86.733	Scophthalmus_maximus
ENSCAFG00000010789	-	100	89.703	ENSSDUG00000012605	rtcb	100	89.703	Seriola_dumerili
ENSCAFG00000010789	-	100	89.703	ENSSLDG00000019458	rtcb	100	89.703	Seriola_lalandi_dorsalis
ENSCAFG00000010789	-	66	94.286	ENSSARG00000004799	-	70	94.286	Sorex_araneus
ENSCAFG00000010789	-	100	91.881	ENSSPUG00000012814	RTCB	100	91.881	Sphenodon_punctatus
ENSCAFG00000010789	-	100	90.693	ENSSPAG00000004623	rtcb	100	90.693	Stegastes_partitus
ENSCAFG00000010789	-	100	95.446	ENSSSCG00000000158	RTCB	100	95.446	Sus_scrofa
ENSCAFG00000010789	-	100	93.069	ENSTGUG00000010947	RTCB	99	93.069	Taeniopygia_guttata
ENSCAFG00000010789	-	91	91.087	ENSTRUG00000009880	rtcb	100	90.652	Takifugu_rubripes
ENSCAFG00000010789	-	100	89.307	ENSTNIG00000002484	rtcb	100	89.307	Tetraodon_nigroviridis
ENSCAFG00000010789	-	100	82.970	ENSTBEG00000004418	RTCB	100	82.970	Tupaia_belangeri
ENSCAFG00000010789	-	93	94.468	ENSTTRG00000006417	RTCB	100	94.468	Tursiops_truncatus
ENSCAFG00000010789	-	100	95.644	ENSUAMG00000022792	RTCB	100	95.644	Ursus_americanus
ENSCAFG00000010789	-	100	95.644	ENSUMAG00000017225	RTCB	100	95.644	Ursus_maritimus
ENSCAFG00000010789	-	100	95.248	ENSVPAG00000005375	RTCB	100	95.248	Vicugna_pacos
ENSCAFG00000010789	-	100	95.644	ENSVVUG00000023408	RTCB	100	95.644	Vulpes_vulpes
ENSCAFG00000010789	-	100	90.693	ENSXETG00000011523	rtcb	100	90.693	Xenopus_tropicalis
ENSCAFG00000010789	-	100	90.891	ENSXMAG00000002855	rtcb	100	90.891	Xiphophorus_maculatus