EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000010797 (Gene tree)
Gene ID: 607017
Gene Symbol: SBDS
Alias: -
Full Name: SBDS%2C ribosome maturation factor
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 6759 bases
Position: chr6:1255979-1262737
Accession: 45881
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000015943	SBDS	PF01172.18	4.3e-30	1	1
ENSCAFP00000015943	SBDS_C	PF09377.10	5.5e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000017228	-	1507	XM_014114150	ENSCAFP00000015943	252 (aa)	XP_013969625	E2R2W6

Gene Model

Click here to download ENSCAFG00000010797's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000010797's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000010797	SBDS	100	97.222	ENSG00000126524	SBDS	100	97.222	Homo_sapiens
ENSCAFG00000010797	SBDS	99	81.275	ENSAPOG00000014285	sbds	100	81.275	Acanthochromis_polyacanthus
ENSCAFG00000010797	SBDS	100	97.222	ENSAMEG00000018167	SBDS	100	97.222	Ailuropoda_melanoleuca
ENSCAFG00000010797	SBDS	99	80.709	ENSACIG00000007308	sbds	100	80.709	Amphilophus_citrinellus
ENSCAFG00000010797	SBDS	99	81.275	ENSAOCG00000016770	sbds	100	81.275	Amphiprion_ocellaris
ENSCAFG00000010797	SBDS	99	81.673	ENSAPEG00000015897	sbds	100	81.673	Amphiprion_percula
ENSCAFG00000010797	SBDS	99	81.673	ENSATEG00000006901	sbds	100	81.673	Anabas_testudineus
ENSCAFG00000010797	SBDS	82	98.551	ENSANAG00000037501	-	100	98.551	Aotus_nancymaae
ENSCAFG00000010797	SBDS	92	90.987	ENSANAG00000024342	-	97	90.987	Aotus_nancymaae
ENSCAFG00000010797	SBDS	99	82.072	ENSACLG00000018750	sbds	100	82.072	Astatotilapia_calliptera
ENSCAFG00000010797	SBDS	100	83.730	ENSAMXG00000005361	sbds	100	83.730	Astyanax_mexicanus
ENSCAFG00000010797	SBDS	100	95.635	ENSBTAG00000004051	SBDS	100	95.635	Bos_taurus
ENSCAFG00000010797	SBDS	98	55.645	WBGene00021063	sbds-1	97	55.645	Caenorhabditis_elegans
ENSCAFG00000010797	SBDS	100	95.635	ENSCJAG00000041007	SBDS	100	95.635	Callithrix_jacchus
ENSCAFG00000010797	SBDS	100	97.619	ENSCAFG00020005357	SBDS	100	97.619	Canis_lupus_dingo
ENSCAFG00000010797	SBDS	100	96.429	ENSCHIG00000026854	SBDS	100	96.429	Capra_hircus
ENSCAFG00000010797	SBDS	100	96.825	ENSTSYG00000033822	SBDS	100	96.825	Carlito_syrichta
ENSCAFG00000010797	SBDS	65	96.341	ENSCAPG00000006634	SBDS	100	96.341	Cavia_aperea
ENSCAFG00000010797	SBDS	100	95.238	ENSCPOG00000036143	SBDS	100	95.238	Cavia_porcellus
ENSCAFG00000010797	SBDS	100	96.429	ENSCCAG00000020671	SBDS	100	96.429	Cebus_capucinus
ENSCAFG00000010797	SBDS	100	96.825	ENSCATG00000039026	SBDS	100	96.825	Cercocebus_atys
ENSCAFG00000010797	SBDS	100	94.841	ENSCLAG00000005721	-	100	94.841	Chinchilla_lanigera
ENSCAFG00000010797	SBDS	99	68.800	ENSCLAG00000002113	-	99	68.800	Chinchilla_lanigera
ENSCAFG00000010797	SBDS	100	96.825	ENSCSAG00000018275	SBDS	100	96.825	Chlorocebus_sabaeus
ENSCAFG00000010797	SBDS	100	91.270	ENSCHOG00000003795	SBDS	100	91.270	Choloepus_hoffmanni
ENSCAFG00000010797	SBDS	100	87.698	ENSCPBG00000014893	SBDS	100	87.698	Chrysemys_picta_bellii
ENSCAFG00000010797	SBDS	99	65.873	ENSCSAVG00000011811	-	100	65.873	Ciona_savignyi
ENSCAFG00000010797	SBDS	100	96.429	ENSCANG00000032368	SBDS	100	96.429	Colobus_angolensis_palliatus
ENSCAFG00000010797	SBDS	65	93.902	ENSCGRG00001019886	Sbds	100	93.902	Cricetulus_griseus_chok1gshd
ENSCAFG00000010797	SBDS	82	95.169	ENSCGRG00000009211	Sbds	100	95.169	Cricetulus_griseus_crigri
ENSCAFG00000010797	SBDS	99	79.681	ENSCSEG00000005798	sbds	100	79.681	Cynoglossus_semilaevis
ENSCAFG00000010797	SBDS	99	79.681	ENSCVAG00000001053	sbds	100	79.681	Cyprinodon_variegatus
ENSCAFG00000010797	SBDS	100	82.540	ENSDARG00000027803	sbds	100	82.540	Danio_rerio
ENSCAFG00000010797	SBDS	100	95.635	ENSDNOG00000041174	SBDS	100	95.635	Dasypus_novemcinctus
ENSCAFG00000010797	SBDS	100	92.857	ENSDORG00000026218	Sbds	100	92.857	Dipodomys_ordii
ENSCAFG00000010797	SBDS	90	57.391	FBgn0035714	CG8549	99	57.769	Drosophila_melanogaster
ENSCAFG00000010797	SBDS	84	62.736	ENSEBUG00000015780	sbds	95	62.736	Eptatretus_burgeri
ENSCAFG00000010797	SBDS	100	96.429	ENSEASG00005008821	SBDS	100	96.429	Equus_asinus_asinus
ENSCAFG00000010797	SBDS	100	96.429	ENSECAG00000008202	SBDS	100	96.429	Equus_caballus
ENSCAFG00000010797	SBDS	83	73.810	ENSEEUG00000004768	SBDS	100	73.810	Erinaceus_europaeus
ENSCAFG00000010797	SBDS	100	80.159	ENSELUG00000008382	sbds	100	80.159	Esox_lucius
ENSCAFG00000010797	SBDS	100	96.825	ENSFCAG00000022142	SBDS	100	96.825	Felis_catus
ENSCAFG00000010797	SBDS	100	87.302	ENSFALG00000013808	SBDS	100	87.302	Ficedula_albicollis
ENSCAFG00000010797	SBDS	100	95.238	ENSFDAG00000018947	-	100	95.238	Fukomys_damarensis
ENSCAFG00000010797	SBDS	99	76.494	ENSFHEG00000000708	sbds	100	76.494	Fundulus_heteroclitus
ENSCAFG00000010797	SBDS	100	82.143	ENSGMOG00000018356	sbds	99	82.143	Gadus_morhua
ENSCAFG00000010797	SBDS	100	87.302	ENSGALG00000027989	SBDS	100	87.302	Gallus_gallus
ENSCAFG00000010797	SBDS	92	76.293	ENSGAFG00000014204	sbds	100	76.293	Gambusia_affinis
ENSCAFG00000010797	SBDS	99	81.275	ENSGACG00000012697	sbds	100	81.275	Gasterosteus_aculeatus
ENSCAFG00000010797	SBDS	86	87.500	ENSGAGG00000022402	SBDS	100	87.500	Gopherus_agassizii
ENSCAFG00000010797	SBDS	96	76.543	ENSGGOG00000040023	-	92	76.543	Gorilla_gorilla
ENSCAFG00000010797	SBDS	99	82.072	ENSHBUG00000002660	sbds	100	82.072	Haplochromis_burtoni
ENSCAFG00000010797	SBDS	100	93.651	ENSHGLG00000009671	SBDS	100	93.651	Heterocephalus_glaber_female
ENSCAFG00000010797	SBDS	100	93.651	ENSHGLG00100011332	SBDS	100	93.651	Heterocephalus_glaber_male
ENSCAFG00000010797	SBDS	99	80.478	ENSHCOG00000018606	sbds	100	80.478	Hippocampus_comes
ENSCAFG00000010797	SBDS	100	83.333	ENSIPUG00000006536	sbds	100	83.333	Ictalurus_punctatus
ENSCAFG00000010797	SBDS	100	91.667	ENSJJAG00000012033	-	100	91.667	Jaculus_jaculus
ENSCAFG00000010797	SBDS	100	69.170	ENSJJAG00000003934	-	100	69.170	Jaculus_jaculus
ENSCAFG00000010797	SBDS	99	82.470	ENSKMAG00000018542	sbds	100	82.470	Kryptolebias_marmoratus
ENSCAFG00000010797	SBDS	99	79.283	ENSLBEG00000016687	sbds	100	79.283	Labrus_bergylta
ENSCAFG00000010797	SBDS	100	67.969	ENSLACG00000018916	SBDS	100	68.605	Latimeria_chalumnae
ENSCAFG00000010797	SBDS	100	85.714	ENSLOCG00000004073	sbds	100	85.714	Lepisosteus_oculatus
ENSCAFG00000010797	SBDS	100	95.635	ENSLAFG00000008763	SBDS	100	95.635	Loxodonta_africana
ENSCAFG00000010797	SBDS	100	96.825	ENSMFAG00000032620	SBDS	100	96.825	Macaca_fascicularis
ENSCAFG00000010797	SBDS	100	96.825	ENSMMUG00000045653	SBDS	100	96.825	Macaca_mulatta
ENSCAFG00000010797	SBDS	100	96.825	ENSMNEG00000031523	SBDS	100	96.825	Macaca_nemestrina
ENSCAFG00000010797	SBDS	100	75.984	ENSMLEG00000036826	SBDS	100	75.984	Mandrillus_leucophaeus
ENSCAFG00000010797	SBDS	99	81.275	ENSMAMG00000016062	sbds	100	81.275	Mastacembelus_armatus
ENSCAFG00000010797	SBDS	99	82.072	ENSMZEG00005024385	sbds	100	82.072	Maylandia_zebra
ENSCAFG00000010797	SBDS	100	87.302	ENSMGAG00000002119	SBDS	100	87.302	Meleagris_gallopavo
ENSCAFG00000010797	SBDS	99	75.697	ENSMAUG00000022214	-	100	75.697	Mesocricetus_auratus
ENSCAFG00000010797	SBDS	100	96.032	ENSMICG00000014366	SBDS	100	96.032	Microcebus_murinus
ENSCAFG00000010797	SBDS	100	94.444	ENSMOCG00000011739	Sbds	100	94.444	Microtus_ochrogaster
ENSCAFG00000010797	SBDS	99	71.825	ENSMMOG00000005061	sbds	100	71.429	Mola_mola
ENSCAFG00000010797	SBDS	100	93.651	ENSMODG00000006644	SBDS	100	93.651	Monodelphis_domestica
ENSCAFG00000010797	SBDS	99	81.275	ENSMALG00000010219	sbds	100	81.275	Monopterus_albus
ENSCAFG00000010797	SBDS	100	94.444	MGP_CAROLIEiJ_G0027800	Sbds	100	94.444	Mus_caroli
ENSCAFG00000010797	SBDS	100	94.048	ENSMUSG00000025337	Sbds	100	94.048	Mus_musculus
ENSCAFG00000010797	SBDS	100	94.048	MGP_PahariEiJ_G0024384	Sbds	100	94.048	Mus_pahari
ENSCAFG00000010797	SBDS	100	94.048	MGP_SPRETEiJ_G0028798	Sbds	100	94.048	Mus_spretus
ENSCAFG00000010797	SBDS	67	94.643	ENSMPUG00000016192	SBDS	97	94.643	Mustela_putorius_furo
ENSCAFG00000010797	SBDS	72	96.154	ENSMLUG00000013575	SBDS	100	96.154	Myotis_lucifugus
ENSCAFG00000010797	SBDS	100	94.444	ENSNGAG00000012093	Sbds	100	94.444	Nannospalax_galili
ENSCAFG00000010797	SBDS	99	82.072	ENSNBRG00000017027	sbds	100	82.072	Neolamprologus_brichardi
ENSCAFG00000010797	SBDS	100	96.825	ENSNLEG00000013288	SBDS	100	96.825	Nomascus_leucogenys
ENSCAFG00000010797	SBDS	100	93.254	ENSOPRG00000008721	SBDS	100	93.254	Ochotona_princeps
ENSCAFG00000010797	SBDS	99	70.916	ENSODEG00000000137	-	85	74.206	Octodon_degus
ENSCAFG00000010797	SBDS	100	84.921	ENSODEG00000019253	-	84	84.921	Octodon_degus
ENSCAFG00000010797	SBDS	99	75.299	ENSODEG00000001116	-	99	75.299	Octodon_degus
ENSCAFG00000010797	SBDS	99	81.275	ENSONIG00000005874	sbds	100	81.275	Oreochromis_niloticus
ENSCAFG00000010797	SBDS	82	92.271	ENSOANG00000007674	-	100	92.271	Ornithorhynchus_anatinus
ENSCAFG00000010797	SBDS	100	94.841	ENSOCUG00000003170	SBDS	100	94.841	Oryctolagus_cuniculus
ENSCAFG00000010797	SBDS	99	78.884	ENSORLG00000023489	sbds	100	78.884	Oryzias_latipes
ENSCAFG00000010797	SBDS	99	78.486	ENSORLG00020019282	sbds	100	78.486	Oryzias_latipes_hni
ENSCAFG00000010797	SBDS	99	78.486	ENSORLG00015008005	sbds	100	78.486	Oryzias_latipes_hsok
ENSCAFG00000010797	SBDS	99	79.283	ENSOMEG00000022747	sbds	100	79.283	Oryzias_melastigma
ENSCAFG00000010797	SBDS	100	79.762	ENSOGAG00000015036	-	100	79.762	Otolemur_garnettii
ENSCAFG00000010797	SBDS	100	95.238	ENSOGAG00000009011	-	100	95.238	Otolemur_garnettii
ENSCAFG00000010797	SBDS	100	96.429	ENSOARG00000010609	SBDS	100	96.429	Ovis_aries
ENSCAFG00000010797	SBDS	100	96.032	ENSPPAG00000043889	-	100	96.032	Pan_paniscus
ENSCAFG00000010797	SBDS	100	96.825	ENSPPRG00000002307	SBDS	100	96.825	Panthera_pardus
ENSCAFG00000010797	SBDS	100	96.825	ENSPTIG00000021308	SBDS	100	96.825	Panthera_tigris_altaica
ENSCAFG00000010797	SBDS	100	82.540	ENSPTRG00000047744	-	100	82.540	Pan_troglodytes
ENSCAFG00000010797	SBDS	100	96.825	ENSPTRG00000019254	SBDS	100	96.825	Pan_troglodytes
ENSCAFG00000010797	SBDS	87	93.607	ENSPTRG00000048174	-	96	93.607	Pan_troglodytes
ENSCAFG00000010797	SBDS	100	82.937	ENSPTRG00000050835	-	100	82.937	Pan_troglodytes
ENSCAFG00000010797	SBDS	100	97.222	ENSPANG00000004078	SBDS	100	97.222	Papio_anubis
ENSCAFG00000010797	SBDS	100	82.540	ENSPKIG00000006489	sbds	100	82.540	Paramormyrops_kingsleyae
ENSCAFG00000010797	SBDS	82	90.338	ENSPSIG00000014603	SBDS	99	90.338	Pelodiscus_sinensis
ENSCAFG00000010797	SBDS	99	80.080	ENSPMGG00000004246	sbds	100	80.080	Periophthalmus_magnuspinnatus
ENSCAFG00000010797	SBDS	100	94.048	ENSPEMG00000008728	Sbds	100	94.048	Peromyscus_maniculatus_bairdii
ENSCAFG00000010797	SBDS	100	92.063	ENSPCIG00000029718	SBDS	100	92.063	Phascolarctos_cinereus
ENSCAFG00000010797	SBDS	99	78.884	ENSPFOG00000015837	sbds	100	78.884	Poecilia_formosa
ENSCAFG00000010797	SBDS	99	78.884	ENSPLAG00000003641	sbds	100	78.884	Poecilia_latipinna
ENSCAFG00000010797	SBDS	99	78.884	ENSPMEG00000019483	sbds	100	78.884	Poecilia_mexicana
ENSCAFG00000010797	SBDS	99	78.486	ENSPREG00000018758	sbds	100	78.486	Poecilia_reticulata
ENSCAFG00000010797	SBDS	100	96.825	ENSPPYG00000017513	SBDS	100	96.825	Pongo_abelii
ENSCAFG00000010797	SBDS	100	95.635	ENSPCOG00000021098	SBDS	100	95.635	Propithecus_coquereli
ENSCAFG00000010797	SBDS	100	96.032	ENSPVAG00000009369	SBDS	100	96.032	Pteropus_vampyrus
ENSCAFG00000010797	SBDS	99	81.673	ENSPNYG00000022403	sbds	100	81.673	Pundamilia_nyererei
ENSCAFG00000010797	SBDS	100	83.730	ENSPNAG00000001120	sbds	100	83.730	Pygocentrus_nattereri
ENSCAFG00000010797	SBDS	100	94.841	ENSRNOG00000000888	Sbds	100	94.841	Rattus_norvegicus
ENSCAFG00000010797	SBDS	100	96.825	ENSRBIG00000035557	SBDS	100	96.825	Rhinopithecus_bieti
ENSCAFG00000010797	SBDS	100	96.825	ENSRROG00000040842	-	100	96.825	Rhinopithecus_roxellana
ENSCAFG00000010797	SBDS	100	78.968	ENSRROG00000041986	-	100	77.381	Rhinopithecus_roxellana
ENSCAFG00000010797	SBDS	96	42.510	YLR022C	-	96	41.296	Saccharomyces_cerevisiae
ENSCAFG00000010797	SBDS	93	95.726	ENSSBOG00000022460	SBDS	100	95.726	Saimiri_boliviensis_boliviensis
ENSCAFG00000010797	SBDS	100	80.159	ENSSHAG00000010263	SBDS	100	80.159	Sarcophilus_harrisii
ENSCAFG00000010797	SBDS	100	83.730	ENSSFOG00015001108	sbds	100	83.730	Scleropages_formosus
ENSCAFG00000010797	SBDS	99	82.869	ENSSMAG00000020506	sbds	100	82.869	Scophthalmus_maximus
ENSCAFG00000010797	SBDS	99	80.876	ENSSDUG00000001528	sbds	100	80.876	Seriola_dumerili
ENSCAFG00000010797	SBDS	99	81.275	ENSSLDG00000003659	sbds	100	81.275	Seriola_lalandi_dorsalis
ENSCAFG00000010797	SBDS	62	94.839	ENSSARG00000013132	-	100	94.839	Sorex_araneus
ENSCAFG00000010797	SBDS	73	92.784	ENSSARG00000001899	-	73	92.784	Sorex_araneus
ENSCAFG00000010797	SBDS	100	84.524	ENSSPUG00000002699	SBDS	100	84.524	Sphenodon_punctatus
ENSCAFG00000010797	SBDS	99	81.275	ENSSPAG00000016419	sbds	100	73.810	Stegastes_partitus
ENSCAFG00000010797	SBDS	100	96.032	ENSSSCG00000007732	SBDS	100	96.032	Sus_scrofa
ENSCAFG00000010797	SBDS	65	89.091	ENSTGUG00000003426	SBDS	99	89.091	Taeniopygia_guttata
ENSCAFG00000010797	SBDS	99	81.275	ENSTRUG00000021443	sbds	100	81.275	Takifugu_rubripes
ENSCAFG00000010797	SBDS	99	80.080	ENSTNIG00000019000	sbds	100	80.080	Tetraodon_nigroviridis
ENSCAFG00000010797	SBDS	83	80.476	ENSTBEG00000001178	SBDS	100	80.476	Tupaia_belangeri
ENSCAFG00000010797	SBDS	100	76.190	ENSTTRG00000003921	SBDS	100	76.190	Tursiops_truncatus
ENSCAFG00000010797	SBDS	100	97.222	ENSUAMG00000001326	SBDS	100	97.222	Ursus_americanus
ENSCAFG00000010797	SBDS	100	97.222	ENSUMAG00000015353	SBDS	100	97.222	Ursus_maritimus
ENSCAFG00000010797	SBDS	100	97.619	ENSVVUG00000016478	SBDS	100	97.619	Vulpes_vulpes
ENSCAFG00000010797	SBDS	100	84.524	ENSXETG00000010093	sbds	100	84.524	Xenopus_tropicalis
ENSCAFG00000010797	SBDS	99	71.713	ENSXCOG00000010639	sbds	100	71.713	Xiphophorus_couchianus
ENSCAFG00000010797	SBDS	99	79.283	ENSXMAG00000006065	sbds	100	79.283	Xiphophorus_maculatus