EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000010909 (Gene tree)
Gene ID: 480230
Gene Symbol: CPSF2
Alias: -
Full Name: cleavage and polyadenylation specific factor 2
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 28468 bases
Position: chr8:1367768-1396235
Accession: 39574
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000016090	Beta-Casp	PF10996.8	8e-21	1	1
ENSCAFP00000016090	Lactamase_B	PF00753.27	1.3e-06	1	1
ENSCAFP00000016090	RMMBL	PF07521.12	1.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000017381	-	2439	XM_537353	ENSCAFP00000016090	782 (aa)	XP_537353	E2R496

Gene Model

Click here to download ENSCAFG00000010909's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000010909's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000010909	CPSF2	100	99.616	ENSG00000165934	CPSF2	100	100.000	Homo_sapiens
ENSCAFG00000010909	CPSF2	100	85.805	ENSAPOG00000001242	cpsf2	100	85.805	Acanthochromis_polyacanthus
ENSCAFG00000010909	CPSF2	100	86.203	ENSACIG00000009331	cpsf2	100	86.203	Amphilophus_citrinellus
ENSCAFG00000010909	CPSF2	100	85.932	ENSAOCG00000014095	cpsf2	100	85.932	Amphiprion_ocellaris
ENSCAFG00000010909	CPSF2	100	85.932	ENSAPEG00000009158	cpsf2	100	85.932	Amphiprion_percula
ENSCAFG00000010909	CPSF2	96	86.316	ENSATEG00000017644	cpsf2	100	84.474	Anabas_testudineus
ENSCAFG00000010909	CPSF2	100	96.051	ENSAPLG00000006330	CPSF2	100	96.051	Anas_platyrhynchos
ENSCAFG00000010909	CPSF2	100	95.019	ENSACAG00000009245	CPSF2	100	95.019	Anolis_carolinensis
ENSCAFG00000010909	CPSF2	100	99.616	ENSANAG00000022915	CPSF2	100	99.616	Aotus_nancymaae
ENSCAFG00000010909	CPSF2	100	85.642	ENSAMXG00000018696	cpsf2	100	85.642	Astyanax_mexicanus
ENSCAFG00000010909	CPSF2	100	99.616	ENSBTAG00000010227	CPSF2	100	99.616	Bos_taurus
ENSCAFG00000010909	CPSF2	100	41.569	WBGene00017313	cpsf-2	100	40.936	Caenorhabditis_elegans
ENSCAFG00000010909	CPSF2	100	99.616	ENSCJAG00000018069	CPSF2	100	99.616	Callithrix_jacchus
ENSCAFG00000010909	CPSF2	100	100.000	ENSCAFG00020020670	CPSF2	100	100.000	Canis_lupus_dingo
ENSCAFG00000010909	CPSF2	100	99.616	ENSCHIG00000023848	CPSF2	100	99.616	Capra_hircus
ENSCAFG00000010909	CPSF2	100	98.465	ENSTSYG00000009036	CPSF2	100	98.465	Carlito_syrichta
ENSCAFG00000010909	CPSF2	100	99.872	ENSCPOG00000010899	CPSF2	100	99.872	Cavia_porcellus
ENSCAFG00000010909	CPSF2	100	99.616	ENSCCAG00000028088	CPSF2	100	99.616	Cebus_capucinus
ENSCAFG00000010909	CPSF2	100	99.744	ENSCATG00000030132	CPSF2	100	99.744	Cercocebus_atys
ENSCAFG00000010909	CPSF2	100	99.744	ENSCLAG00000012404	CPSF2	100	99.744	Chinchilla_lanigera
ENSCAFG00000010909	CPSF2	100	99.744	ENSCSAG00000011300	CPSF2	100	99.744	Chlorocebus_sabaeus
ENSCAFG00000010909	CPSF2	100	92.583	ENSCHOG00000012904	CPSF2	100	92.583	Choloepus_hoffmanni
ENSCAFG00000010909	CPSF2	100	96.424	ENSCPBG00000008766	CPSF2	97	96.424	Chrysemys_picta_bellii
ENSCAFG00000010909	CPSF2	100	54.795	ENSCING00000007881	-	100	54.421	Ciona_intestinalis
ENSCAFG00000010909	CPSF2	94	99.727	ENSCANG00000041651	CPSF2	100	99.727	Colobus_angolensis_palliatus
ENSCAFG00000010909	CPSF2	100	98.593	ENSCGRG00001006901	Cpsf2	100	98.593	Cricetulus_griseus_chok1gshd
ENSCAFG00000010909	CPSF2	100	98.593	ENSCGRG00000012416	Cpsf2	100	98.593	Cricetulus_griseus_crigri
ENSCAFG00000010909	CPSF2	100	83.777	ENSCSEG00000004116	cpsf2	100	83.777	Cynoglossus_semilaevis
ENSCAFG00000010909	CPSF2	100	85.171	ENSCVAG00000000095	cpsf2	100	85.298	Cyprinodon_variegatus
ENSCAFG00000010909	CPSF2	100	85.570	ENSDARG00000028971	cpsf2	100	85.570	Danio_rerio
ENSCAFG00000010909	CPSF2	100	99.616	ENSDNOG00000042757	CPSF2	100	99.616	Dasypus_novemcinctus
ENSCAFG00000010909	CPSF2	100	99.488	ENSDORG00000013709	Cpsf2	100	99.488	Dipodomys_ordii
ENSCAFG00000010909	CPSF2	100	54.047	FBgn0027873	Cpsf100	100	53.808	Drosophila_melanogaster
ENSCAFG00000010909	CPSF2	100	90.421	ENSETEG00000012123	CPSF2	100	90.421	Echinops_telfairi
ENSCAFG00000010909	CPSF2	52	76.225	ENSEBUG00000012098	cpsf2	93	76.225	Eptatretus_burgeri
ENSCAFG00000010909	CPSF2	91	97.611	ENSEASG00005021193	CPSF2	100	97.611	Equus_asinus_asinus
ENSCAFG00000010909	CPSF2	100	99.616	ENSECAG00000023935	CPSF2	100	99.616	Equus_caballus
ENSCAFG00000010909	CPSF2	100	83.940	ENSELUG00000008442	cpsf2	100	83.940	Esox_lucius
ENSCAFG00000010909	CPSF2	100	99.616	ENSFCAG00000007886	CPSF2	100	99.616	Felis_catus
ENSCAFG00000010909	CPSF2	100	96.296	ENSFALG00000002412	CPSF2	100	96.296	Ficedula_albicollis
ENSCAFG00000010909	CPSF2	100	99.744	ENSFDAG00000006327	CPSF2	100	99.744	Fukomys_damarensis
ENSCAFG00000010909	CPSF2	96	84.444	ENSFHEG00000015465	cpsf2	98	84.706	Fundulus_heteroclitus
ENSCAFG00000010909	CPSF2	100	83.460	ENSGMOG00000008761	cpsf2	100	83.460	Gadus_morhua
ENSCAFG00000010909	CPSF2	100	95.530	ENSGALG00000010783	CPSF2	100	96.041	Gallus_gallus
ENSCAFG00000010909	CPSF2	100	85.425	ENSGAFG00000001407	cpsf2	100	85.425	Gambusia_affinis
ENSCAFG00000010909	CPSF2	100	84.537	ENSGACG00000008418	cpsf2	100	84.537	Gasterosteus_aculeatus
ENSCAFG00000010909	CPSF2	100	96.552	ENSGAGG00000008287	CPSF2	100	96.552	Gopherus_agassizii
ENSCAFG00000010909	CPSF2	100	99.616	ENSGGOG00000011799	CPSF2	100	99.616	Gorilla_gorilla
ENSCAFG00000010909	CPSF2	100	85.171	ENSHBUG00000023466	cpsf2	100	85.171	Haplochromis_burtoni
ENSCAFG00000010909	CPSF2	100	99.616	ENSHGLG00000018311	CPSF2	100	99.616	Heterocephalus_glaber_female
ENSCAFG00000010909	CPSF2	100	99.616	ENSHGLG00100016460	CPSF2	100	99.616	Heterocephalus_glaber_male
ENSCAFG00000010909	CPSF2	100	84.537	ENSHCOG00000019527	cpsf2	98	84.537	Hippocampus_comes
ENSCAFG00000010909	CPSF2	100	85.642	ENSIPUG00000020857	cpsf2	100	85.642	Ictalurus_punctatus
ENSCAFG00000010909	CPSF2	100	99.744	ENSSTOG00000009528	CPSF2	100	99.744	Ictidomys_tridecemlineatus
ENSCAFG00000010909	CPSF2	100	99.361	ENSJJAG00000017925	Cpsf2	100	99.361	Jaculus_jaculus
ENSCAFG00000010909	CPSF2	100	84.664	ENSKMAG00000019429	cpsf2	100	84.664	Kryptolebias_marmoratus
ENSCAFG00000010909	CPSF2	95	84.070	ENSLBEG00000011585	cpsf2	100	84.225	Labrus_bergylta
ENSCAFG00000010909	CPSF2	100	89.783	ENSLACG00000019024	CPSF2	100	90.038	Latimeria_chalumnae
ENSCAFG00000010909	CPSF2	100	87.706	ENSLOCG00000014102	cpsf2	100	87.706	Lepisosteus_oculatus
ENSCAFG00000010909	CPSF2	100	99.362	ENSLAFG00000004891	CPSF2	100	99.362	Loxodonta_africana
ENSCAFG00000010909	CPSF2	100	99.744	ENSMFAG00000041212	CPSF2	100	99.744	Macaca_fascicularis
ENSCAFG00000010909	CPSF2	100	99.744	ENSMMUG00000000699	CPSF2	100	99.744	Macaca_mulatta
ENSCAFG00000010909	CPSF2	100	99.744	ENSMNEG00000031584	CPSF2	100	99.744	Macaca_nemestrina
ENSCAFG00000010909	CPSF2	100	99.744	ENSMLEG00000029394	CPSF2	100	99.744	Mandrillus_leucophaeus
ENSCAFG00000010909	CPSF2	100	85.932	ENSMAMG00000004235	cpsf2	100	85.932	Mastacembelus_armatus
ENSCAFG00000010909	CPSF2	100	85.298	ENSMZEG00005001769	cpsf2	100	85.298	Maylandia_zebra
ENSCAFG00000010909	CPSF2	100	95.536	ENSMGAG00000013122	CPSF2	100	96.046	Meleagris_gallopavo
ENSCAFG00000010909	CPSF2	100	98.593	ENSMAUG00000015160	Cpsf2	100	98.593	Mesocricetus_auratus
ENSCAFG00000010909	CPSF2	100	99.616	ENSMICG00000016441	CPSF2	100	99.616	Microcebus_murinus
ENSCAFG00000010909	CPSF2	100	98.593	ENSMOCG00000015372	Cpsf2	100	98.593	Microtus_ochrogaster
ENSCAFG00000010909	CPSF2	100	81.242	ENSMMOG00000015590	cpsf2	100	81.242	Mola_mola
ENSCAFG00000010909	CPSF2	100	98.977	ENSMODG00000002042	CPSF2	100	98.977	Monodelphis_domestica
ENSCAFG00000010909	CPSF2	100	82.763	ENSMALG00000022275	cpsf2	100	82.763	Monopterus_albus
ENSCAFG00000010909	CPSF2	100	98.082	ENSMUSG00000041781	Cpsf2	100	98.082	Mus_musculus
ENSCAFG00000010909	CPSF2	100	98.338	MGP_PahariEiJ_G0029791	Cpsf2	100	98.338	Mus_pahari
ENSCAFG00000010909	CPSF2	100	98.082	MGP_SPRETEiJ_G0018877	Cpsf2	100	98.082	Mus_spretus
ENSCAFG00000010909	CPSF2	100	99.744	ENSMPUG00000007617	CPSF2	98	99.744	Mustela_putorius_furo
ENSCAFG00000010909	CPSF2	100	98.977	ENSMLUG00000005570	CPSF2	100	98.977	Myotis_lucifugus
ENSCAFG00000010909	CPSF2	100	99.105	ENSNGAG00000020312	Cpsf2	100	99.105	Nannospalax_galili
ENSCAFG00000010909	CPSF2	100	85.678	ENSNBRG00000022402	cpsf2	100	85.678	Neolamprologus_brichardi
ENSCAFG00000010909	CPSF2	100	98.721	ENSNLEG00000017132	CPSF2	100	98.721	Nomascus_leucogenys
ENSCAFG00000010909	CPSF2	91	99.676	ENSMEUG00000008138	CPSF2	91	99.676	Notamacropus_eugenii
ENSCAFG00000010909	CPSF2	94	91.940	ENSOPRG00000008484	-	100	91.940	Ochotona_princeps
ENSCAFG00000010909	CPSF2	100	99.488	ENSODEG00000008682	CPSF2	100	99.488	Octodon_degus
ENSCAFG00000010909	CPSF2	100	86.058	ENSONIG00000005901	cpsf2	100	86.058	Oreochromis_niloticus
ENSCAFG00000010909	CPSF2	100	98.593	ENSOANG00000003822	CPSF2	100	98.593	Ornithorhynchus_anatinus
ENSCAFG00000010909	CPSF2	100	99.616	ENSOCUG00000005713	CPSF2	100	99.616	Oryctolagus_cuniculus
ENSCAFG00000010909	CPSF2	100	79.975	ENSORLG00000011628	cpsf2	100	79.975	Oryzias_latipes
ENSCAFG00000010909	CPSF2	100	84.791	ENSORLG00020016980	cpsf2	100	84.791	Oryzias_latipes_hni
ENSCAFG00000010909	CPSF2	100	84.791	ENSORLG00015011910	cpsf2	100	84.791	Oryzias_latipes_hsok
ENSCAFG00000010909	CPSF2	100	84.030	ENSOMEG00000022876	cpsf2	100	84.030	Oryzias_melastigma
ENSCAFG00000010909	CPSF2	100	96.556	ENSOARG00000012889	CPSF2	100	96.556	Ovis_aries
ENSCAFG00000010909	CPSF2	100	99.616	ENSPPAG00000039666	CPSF2	100	99.616	Pan_paniscus
ENSCAFG00000010909	CPSF2	99	99.616	ENSPPRG00000010869	CPSF2	100	99.616	Panthera_pardus
ENSCAFG00000010909	CPSF2	100	99.616	ENSPTIG00000021202	CPSF2	100	99.616	Panthera_tigris_altaica
ENSCAFG00000010909	CPSF2	100	99.616	ENSPTRG00000006651	CPSF2	100	99.616	Pan_troglodytes
ENSCAFG00000010909	CPSF2	100	99.744	ENSPANG00000017417	CPSF2	100	99.744	Papio_anubis
ENSCAFG00000010909	CPSF2	100	82.084	ENSPKIG00000021453	cpsf2	100	82.084	Paramormyrops_kingsleyae
ENSCAFG00000010909	CPSF2	100	95.913	ENSPSIG00000006289	CPSF2	100	95.913	Pelodiscus_sinensis
ENSCAFG00000010909	CPSF2	76	79.734	ENSPMGG00000002511	cpsf2	100	79.900	Periophthalmus_magnuspinnatus
ENSCAFG00000010909	CPSF2	100	98.849	ENSPEMG00000007917	Cpsf2	100	98.849	Peromyscus_maniculatus_bairdii
ENSCAFG00000010909	CPSF2	100	74.336	ENSPMAG00000006205	cpsf2	100	74.336	Petromyzon_marinus
ENSCAFG00000010909	CPSF2	100	98.977	ENSPCIG00000011393	CPSF2	100	98.977	Phascolarctos_cinereus
ENSCAFG00000010909	CPSF2	100	85.298	ENSPFOG00000018648	cpsf2	100	85.298	Poecilia_formosa
ENSCAFG00000010909	CPSF2	100	85.298	ENSPLAG00000019199	cpsf2	99	85.298	Poecilia_latipinna
ENSCAFG00000010909	CPSF2	96	85.658	ENSPMEG00000012100	cpsf2	100	85.027	Poecilia_mexicana
ENSCAFG00000010909	CPSF2	100	85.171	ENSPREG00000008960	cpsf2	100	85.171	Poecilia_reticulata
ENSCAFG00000010909	CPSF2	63	99.395	ENSPPYG00000029685	-	100	99.395	Pongo_abelii
ENSCAFG00000010909	CPSF2	100	99.233	ENSPCAG00000012477	CPSF2	100	99.233	Procavia_capensis
ENSCAFG00000010909	CPSF2	100	99.616	ENSPCOG00000026387	CPSF2	100	99.616	Propithecus_coquereli
ENSCAFG00000010909	CPSF2	65	100.000	ENSPVAG00000004223	CPSF2	65	100.000	Pteropus_vampyrus
ENSCAFG00000010909	CPSF2	100	85.316	ENSPNYG00000023356	cpsf2	100	85.316	Pundamilia_nyererei
ENSCAFG00000010909	CPSF2	100	86.785	ENSPNAG00000001849	cpsf2	100	86.785	Pygocentrus_nattereri
ENSCAFG00000010909	CPSF2	100	98.465	ENSRNOG00000005733	Cpsf2	100	98.465	Rattus_norvegicus
ENSCAFG00000010909	CPSF2	100	99.744	ENSRBIG00000044792	CPSF2	100	99.744	Rhinopithecus_bieti
ENSCAFG00000010909	CPSF2	100	99.744	ENSRROG00000034875	CPSF2	100	99.744	Rhinopithecus_roxellana
ENSCAFG00000010909	CPSF2	100	99.616	ENSSBOG00000024571	CPSF2	100	99.616	Saimiri_boliviensis_boliviensis
ENSCAFG00000010909	CPSF2	100	99.105	ENSSHAG00000010458	CPSF2	100	99.105	Sarcophilus_harrisii
ENSCAFG00000010909	CPSF2	100	87.294	ENSSFOG00015002117	cpsf2	100	87.294	Scleropages_formosus
ENSCAFG00000010909	CPSF2	100	84.157	ENSSMAG00000002001	cpsf2	100	84.157	Scophthalmus_maximus
ENSCAFG00000010909	CPSF2	100	86.312	ENSSDUG00000004084	cpsf2	100	86.312	Seriola_dumerili
ENSCAFG00000010909	CPSF2	100	85.805	ENSSLDG00000024330	cpsf2	100	85.805	Seriola_lalandi_dorsalis
ENSCAFG00000010909	CPSF2	58	100.000	ENSSARG00000009784	-	63	100.000	Sorex_araneus
ENSCAFG00000010909	CPSF2	100	95.785	ENSSPUG00000013485	CPSF2	100	95.785	Sphenodon_punctatus
ENSCAFG00000010909	CPSF2	100	85.298	ENSSPAG00000013284	cpsf2	100	85.298	Stegastes_partitus
ENSCAFG00000010909	CPSF2	100	99.616	ENSSSCG00000002447	CPSF2	100	99.616	Sus_scrofa
ENSCAFG00000010909	CPSF2	100	96.424	ENSTGUG00000012571	-	100	96.424	Taeniopygia_guttata
ENSCAFG00000010909	CPSF2	100	84.664	ENSTRUG00000003742	cpsf2	100	84.664	Takifugu_rubripes
ENSCAFG00000010909	CPSF2	100	83.565	ENSTNIG00000012228	cpsf2	100	84.324	Tetraodon_nigroviridis
ENSCAFG00000010909	CPSF2	91	100.000	ENSTBEG00000004530	CPSF2	94	100.000	Tupaia_belangeri
ENSCAFG00000010909	CPSF2	88	100.000	ENSTTRG00000008697	CPSF2	88	100.000	Tursiops_truncatus
ENSCAFG00000010909	CPSF2	100	99.872	ENSUAMG00000028071	CPSF2	100	99.872	Ursus_americanus
ENSCAFG00000010909	CPSF2	100	99.872	ENSUMAG00000005029	CPSF2	100	99.872	Ursus_maritimus
ENSCAFG00000010909	CPSF2	99	99.744	ENSVPAG00000003503	CPSF2	100	99.744	Vicugna_pacos
ENSCAFG00000010909	CPSF2	100	100.000	ENSVVUG00000024642	CPSF2	100	100.000	Vulpes_vulpes
ENSCAFG00000010909	CPSF2	100	92.209	ENSXETG00000010289	cpsf2	100	92.209	Xenopus_tropicalis
ENSCAFG00000010909	CPSF2	100	85.678	ENSXCOG00000001764	cpsf2	100	85.678	Xiphophorus_couchianus
ENSCAFG00000010909	CPSF2	100	85.805	ENSXMAG00000017048	cpsf2	100	85.805	Xiphophorus_maculatus