EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000010998 (Gene tree)
Gene ID: 479028
Gene Symbol: CHD2
Alias: -
Full Name: chromodomain helicase DNA binding protein 2
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 118763 bases
Position: chr3:47101723-47220485
Accession: 39200
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000040817	ResIII	PF04851.15	9.7e-10	1	1
ENSCAFP00000037891	ResIII	PF04851.15	9.7e-08	1	1
ENSCAFP00000016310	ResIII	PF04851.15	1.1e-07	1	1
ENSCAFP00000042673	ResIII	PF04851.15	1.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000017614	-	5496	-	ENSCAFP00000016310	1831 (aa)	-	E2R5Z7
ENSCAFT00000043290	-	4137	-	ENSCAFP00000040817	1379 (aa)	-	J9NSS6
ENSCAFT00000045903	-	8873	XM_005618322	ENSCAFP00000042673	1840 (aa)	XP_005618379	J9PA90
ENSCAFT00000044612	-	5067	-	ENSCAFP00000037891	1689 (aa)	-	J9NX79

Gene Model

Click here to download ENSCAFG00000010998's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000010998's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000010998	CHD2	50	43.014	ENSCAFG00000019545	CHD5	53	42.879

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000010998	CHD2	100	98.477	ENSG00000173575	CHD2	100	98.246	Homo_sapiens
ENSCAFG00000010998	CHD2	95	75.922	ENSAPOG00000008913	chd2	99	72.258	Acanthochromis_polyacanthus
ENSCAFG00000010998	CHD2	84	99.740	ENSAMEG00000010805	-	100	99.740	Ailuropoda_melanoleuca
ENSCAFG00000010998	CHD2	97	70.771	ENSAOCG00000016332	chd2	99	69.657	Amphiprion_ocellaris
ENSCAFG00000010998	CHD2	95	75.810	ENSAPEG00000016676	chd2	100	71.452	Amphiprion_percula
ENSCAFG00000010998	CHD2	95	76.070	ENSATEG00000005246	chd2	99	71.954	Anabas_testudineus
ENSCAFG00000010998	CHD2	100	90.065	ENSAPLG00000011141	-	99	88.352	Anas_platyrhynchos
ENSCAFG00000010998	CHD2	98	82.331	ENSACAG00000000088	-	99	80.898	Anolis_carolinensis
ENSCAFG00000010998	CHD2	100	98.405	ENSANAG00000024017	-	99	98.340	Aotus_nancymaae
ENSCAFG00000010998	CHD2	91	74.229	ENSACLG00000021370	chd2	96	72.755	Astatotilapia_calliptera
ENSCAFG00000010998	CHD2	61	97.048	ENSBTAG00000017776	CHD2	99	98.678	Bos_taurus
ENSCAFG00000010998	CHD2	100	98.260	ENSCJAG00000020444	-	99	98.284	Callithrix_jacchus
ENSCAFG00000010998	CHD2	99	96.239	ENSCHIG00000022261	-	99	96.452	Capra_hircus
ENSCAFG00000010998	CHD2	100	98.477	ENSTSYG00000003272	-	99	98.561	Carlito_syrichta
ENSCAFG00000010998	CHD2	93	96.349	ENSCPOG00000005800	-	99	96.977	Cavia_porcellus
ENSCAFG00000010998	CHD2	100	98.405	ENSCCAG00000035304	-	99	98.340	Cebus_capucinus
ENSCAFG00000010998	CHD2	100	98.405	ENSCATG00000031069	-	99	98.451	Cercocebus_atys
ENSCAFG00000010998	CHD2	100	97.462	ENSCLAG00000016269	-	99	97.456	Chinchilla_lanigera
ENSCAFG00000010998	CHD2	100	98.477	ENSCSAG00000017007	-	99	98.507	Chlorocebus_sabaeus
ENSCAFG00000010998	CHD2	78	100.000	ENSCHOG00000000608	-	82	100.000	Choloepus_hoffmanni
ENSCAFG00000010998	CHD2	80	88.420	ENSCPBG00000018049	-	97	91.346	Chrysemys_picta_bellii
ENSCAFG00000010998	CHD2	83	56.874	ENSCSAVG00000007580	-	96	58.519	Ciona_savignyi
ENSCAFG00000010998	CHD2	100	98.550	ENSCANG00000038126	-	99	98.507	Colobus_angolensis_palliatus
ENSCAFG00000010998	CHD2	100	97.534	ENSCGRG00001006649	Chd2	99	97.178	Cricetulus_griseus_chok1gshd
ENSCAFG00000010998	CHD2	100	97.534	ENSCGRG00000018154	Chd2	99	97.178	Cricetulus_griseus_crigri
ENSCAFG00000010998	CHD2	94	69.411	ENSCSEG00000003646	chd2	94	68.425	Cynoglossus_semilaevis
ENSCAFG00000010998	CHD2	100	71.053	ENSCVAG00000002427	chd2	93	72.012	Cyprinodon_variegatus
ENSCAFG00000010998	CHD2	97	72.148	ENSDARG00000060687	chd2	99	72.284	Danio_rerio
ENSCAFG00000010998	CHD2	99	97.825	ENSDNOG00000009796	-	99	97.734	Dasypus_novemcinctus
ENSCAFG00000010998	CHD2	59	71.410	ENSEBUG00000014994	chd2	83	74.468	Eptatretus_burgeri
ENSCAFG00000010998	CHD2	100	98.479	ENSEASG00005015526	-	99	100.000	Equus_asinus_asinus
ENSCAFG00000010998	CHD2	93	76.417	ENSELUG00000017981	chd2	99	71.243	Esox_lucius
ENSCAFG00000010998	CHD2	100	90.267	ENSFALG00000010369	-	99	89.439	Ficedula_albicollis
ENSCAFG00000010998	CHD2	100	97.752	ENSFDAG00000020651	-	99	97.290	Fukomys_damarensis
ENSCAFG00000010998	CHD2	88	73.846	ENSFHEG00000002119	chd2	94	69.947	Fundulus_heteroclitus
ENSCAFG00000010998	CHD2	100	71.017	ENSGMOG00000002890	chd2	98	70.970	Gadus_morhua
ENSCAFG00000010998	CHD2	100	89.769	ENSGALG00000006949	CHD2	99	88.804	Gallus_gallus
ENSCAFG00000010998	CHD2	97	70.808	ENSGAFG00000001905	chd2	98	69.901	Gambusia_affinis
ENSCAFG00000010998	CHD2	95	73.780	ENSGACG00000013246	chd2	99	70.453	Gasterosteus_aculeatus
ENSCAFG00000010998	CHD2	79	91.481	ENSGAGG00000013176	-	98	93.552	Gopherus_agassizii
ENSCAFG00000010998	CHD2	100	96.519	ENSGGOG00000015677	CHD2	99	96.958	Gorilla_gorilla
ENSCAFG00000010998	CHD2	95	75.927	ENSHBUG00000017947	chd2	99	72.361	Haplochromis_burtoni
ENSCAFG00000010998	CHD2	100	97.897	ENSHGLG00000004435	CHD2	99	97.290	Heterocephalus_glaber_female
ENSCAFG00000010998	CHD2	100	97.027	ENSHGLG00100016376	-	99	96.626	Heterocephalus_glaber_male
ENSCAFG00000010998	CHD2	96	68.909	ENSHCOG00000008855	chd2	99	66.685	Hippocampus_comes
ENSCAFG00000010998	CHD2	95	73.414	ENSIPUG00000000488	chd2	99	67.867	Ictalurus_punctatus
ENSCAFG00000010998	CHD2	100	98.695	ENSSTOG00000001270	-	99	98.562	Ictidomys_tridecemlineatus
ENSCAFG00000010998	CHD2	100	96.882	ENSJJAG00000000213	Chd2	99	96.735	Jaculus_jaculus
ENSCAFG00000010998	CHD2	84	74.248	ENSKMAG00000015849	chd2	99	73.415	Kryptolebias_marmoratus
ENSCAFG00000010998	CHD2	100	97.607	ENSLAFG00000016885	-	100	97.607	Loxodonta_africana
ENSCAFG00000010998	CHD2	100	98.405	ENSMFAG00000033343	-	99	98.451	Macaca_fascicularis
ENSCAFG00000010998	CHD2	100	98.405	ENSMMUG00000011782	-	99	98.451	Macaca_mulatta
ENSCAFG00000010998	CHD2	100	97.900	ENSMNEG00000036875	-	99	98.066	Macaca_nemestrina
ENSCAFG00000010998	CHD2	100	98.477	ENSMLEG00000035026	-	99	98.507	Mandrillus_leucophaeus
ENSCAFG00000010998	CHD2	95	76.009	ENSMAMG00000009082	chd2	99	71.436	Mastacembelus_armatus
ENSCAFG00000010998	CHD2	91	74.229	ENSMZEG00005021333	chd2	96	72.755	Maylandia_zebra
ENSCAFG00000010998	CHD2	98	89.839	ENSMGAG00000008966	-	100	88.694	Meleagris_gallopavo
ENSCAFG00000010998	CHD2	100	97.391	ENSMICG00000000332	-	100	97.391	Microcebus_murinus
ENSCAFG00000010998	CHD2	100	97.317	ENSMOCG00000015124	Chd2	99	96.903	Microtus_ochrogaster
ENSCAFG00000010998	CHD2	100	92.939	ENSMODG00000013158	-	99	92.625	Monodelphis_domestica
ENSCAFG00000010998	CHD2	100	97.172	MGP_CAROLIEiJ_G0029860	Chd2	99	96.624	Mus_caroli
ENSCAFG00000010998	CHD2	100	96.882	ENSMUSG00000078671	Chd2	99	96.403	Mus_musculus
ENSCAFG00000010998	CHD2	100	97.101	MGP_PahariEiJ_G0013082	Chd2	99	96.626	Mus_pahari
ENSCAFG00000010998	CHD2	100	96.954	MGP_SPRETEiJ_G0030962	Chd2	99	96.514	Mus_spretus
ENSCAFG00000010998	CHD2	100	99.637	ENSMPUG00000017577	-	99	99.557	Mustela_putorius_furo
ENSCAFG00000010998	CHD2	100	96.240	ENSMLUG00000009292	-	99	96.105	Myotis_lucifugus
ENSCAFG00000010998	CHD2	100	97.752	ENSNGAG00000010792	Chd2	99	97.731	Nannospalax_galili
ENSCAFG00000010998	CHD2	95	74.639	ENSNBRG00000020591	chd2	90	75.215	Neolamprologus_brichardi
ENSCAFG00000010998	CHD2	100	94.996	ENSNLEG00000012349	-	99	95.741	Nomascus_leucogenys
ENSCAFG00000010998	CHD2	76	88.830	ENSMEUG00000001522	-	76	89.098	Notamacropus_eugenii
ENSCAFG00000010998	CHD2	100	96.809	ENSODEG00000016028	-	99	96.239	Octodon_degus
ENSCAFG00000010998	CHD2	95	76.042	ENSONIG00000015136	chd2	99	72.361	Oreochromis_niloticus
ENSCAFG00000010998	CHD2	84	88.591	ENSOANG00000004385	-	100	82.776	Ornithorhynchus_anatinus
ENSCAFG00000010998	CHD2	100	95.069	ENSOCUG00000001628	-	99	97.961	Oryctolagus_cuniculus
ENSCAFG00000010998	CHD2	98	72.140	ENSORLG00000008403	chd2	99	71.048	Oryzias_latipes
ENSCAFG00000010998	CHD2	94	75.833	ENSORLG00020004138	chd2	99	71.289	Oryzias_latipes_hni
ENSCAFG00000010998	CHD2	100	69.181	ENSOMEG00000005831	chd2	99	65.142	Oryzias_melastigma
ENSCAFG00000010998	CHD2	100	95.504	ENSOGAG00000010399	-	99	96.073	Otolemur_garnettii
ENSCAFG00000010998	CHD2	100	97.127	ENSOARG00000010343	-	100	97.127	Ovis_aries
ENSCAFG00000010998	CHD2	100	97.757	ENSPPAG00000030381	-	99	97.405	Pan_paniscus
ENSCAFG00000010998	CHD2	100	98.477	ENSPTRG00000007478	CHD2	99	98.507	Pan_troglodytes
ENSCAFG00000010998	CHD2	100	94.561	ENSPANG00000033355	-	99	95.520	Papio_anubis
ENSCAFG00000010998	CHD2	100	70.719	ENSPKIG00000000495	chd2	100	71.152	Paramormyrops_kingsleyae
ENSCAFG00000010998	CHD2	84	71.389	ENSPMGG00000009941	chd2	99	70.577	Periophthalmus_magnuspinnatus
ENSCAFG00000010998	CHD2	100	97.389	ENSPEMG00000019507	Chd2	99	97.122	Peromyscus_maniculatus_bairdii
ENSCAFG00000010998	CHD2	91	92.832	ENSPCIG00000009417	-	100	92.202	Phascolarctos_cinereus
ENSCAFG00000010998	CHD2	52	71.548	ENSPFOG00000000291	-	74	74.669	Poecilia_formosa
ENSCAFG00000010998	CHD2	95	76.320	ENSPFOG00000007050	chd2	99	72.228	Poecilia_formosa
ENSCAFG00000010998	CHD2	95	76.413	ENSPLAG00000005067	chd2	99	72.391	Poecilia_latipinna
ENSCAFG00000010998	CHD2	95	76.320	ENSPMEG00000019628	chd2	99	72.174	Poecilia_mexicana
ENSCAFG00000010998	CHD2	100	96.737	ENSPPYG00000006799	-	99	97.179	Pongo_abelii
ENSCAFG00000010998	CHD2	100	98.550	ENSPCOG00000028084	-	100	97.556	Propithecus_coquereli
ENSCAFG00000010998	CHD2	91	74.229	ENSPNYG00000010273	chd2	96	72.755	Pundamilia_nyererei
ENSCAFG00000010998	CHD2	91	74.080	ENSPNAG00000016719	chd2	99	69.503	Pygocentrus_nattereri
ENSCAFG00000010998	CHD2	100	97.317	ENSRNOG00000012716	Chd2	100	95.870	Rattus_norvegicus
ENSCAFG00000010998	CHD2	99	98.164	ENSRBIG00000036875	-	99	96.352	Rhinopithecus_bieti
ENSCAFG00000010998	CHD2	100	98.477	ENSRROG00000041087	-	99	98.396	Rhinopithecus_roxellana
ENSCAFG00000010998	CHD2	100	98.550	ENSSBOG00000023754	-	99	98.506	Saimiri_boliviensis_boliviensis
ENSCAFG00000010998	CHD2	100	93.156	ENSSHAG00000012513	-	99	92.790	Sarcophilus_harrisii
ENSCAFG00000010998	CHD2	100	75.573	ENSSFOG00015023759	chd2	99	73.134	Scleropages_formosus
ENSCAFG00000010998	CHD2	94	74.452	ENSSMAG00000001726	chd2	99	70.569	Scophthalmus_maximus
ENSCAFG00000010998	CHD2	95	74.235	ENSSLDG00000001146	chd2	100	70.955	Seriola_lalandi_dorsalis
ENSCAFG00000010998	CHD2	82	98.333	ENSSARG00000014112	-	82	98.333	Sorex_araneus
ENSCAFG00000010998	CHD2	99	85.326	ENSSPUG00000011266	-	99	84.234	Sphenodon_punctatus
ENSCAFG00000010998	CHD2	100	99.130	ENSSSCG00000002266	-	100	99.051	Sus_scrofa
ENSCAFG00000010998	CHD2	100	89.797	ENSTGUG00000008540	-	99	89.244	Taeniopygia_guttata
ENSCAFG00000010998	CHD2	99	68.973	ENSTRUG00000008842	chd2	91	68.898	Takifugu_rubripes
ENSCAFG00000010998	CHD2	96	73.174	ENSTNIG00000010760	chd2	99	72.146	Tetraodon_nigroviridis
ENSCAFG00000010998	CHD2	95	97.357	ENSTBEG00000017730	-	83	97.357	Tupaia_belangeri
ENSCAFG00000010998	CHD2	93	97.112	ENSTTRG00000000430	-	90	99.091	Tursiops_truncatus
ENSCAFG00000010998	CHD2	100	99.492	ENSUMAG00000000083	-	99	96.846	Ursus_maritimus
ENSCAFG00000010998	CHD2	90	94.981	ENSVPAG00000009645	-	86	98.195	Vicugna_pacos
ENSCAFG00000010998	CHD2	87	81.036	ENSXETG00000024129	chd2	88	81.826	Xenopus_tropicalis
ENSCAFG00000010998	CHD2	95	73.760	ENSXCOG00000020255	chd2	100	69.572	Xiphophorus_couchianus
ENSCAFG00000010998	CHD2	95	76.546	ENSXMAG00000002707	chd2	99	72.111	Xiphophorus_maculatus