EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000011037 (Gene tree)
Gene ID: 608445
Gene Symbol: NCL
Alias: -
Full Name: nucleolin
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 10075 bases
Position: chr25:43330694-43340768
Accession: 43657
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000016318	RRM_1	PF00076.22	1.1e-57	1	4
ENSCAFP00000016318	RRM_1	PF00076.22	1.1e-57	2	4
ENSCAFP00000016318	RRM_1	PF00076.22	1.1e-57	3	4
ENSCAFP00000016318	RRM_1	PF00076.22	1.1e-57	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000017622	-	3127	XM_845384	ENSCAFP00000016318	715 (aa)	XP_850477	F1Q0B0

Gene Model

Click here to download ENSCAFG00000011037's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000011037's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000011037	NCL	92	90.076	ENSG00000115053	NCL	100	90.934	Homo_sapiens
ENSCAFG00000011037	NCL	53	99.208	ENSAMEG00000016289	NCL	92	94.073	Ailuropoda_melanoleuca
ENSCAFG00000011037	NCL	92	88.720	ENSANAG00000035814	-	100	89.400	Aotus_nancymaae
ENSCAFG00000011037	NCL	99	70.638	ENSANAG00000024378	-	85	81.818	Aotus_nancymaae
ENSCAFG00000011037	NCL	54	90.984	ENSBTAG00000050728	-	81	90.984	Bos_taurus
ENSCAFG00000011037	NCL	94	87.573	ENSBTAG00000016174	NCL	100	90.193	Bos_taurus
ENSCAFG00000011037	NCL	69	91.667	ENSBTAG00000026909	-	86	92.050	Bos_taurus
ENSCAFG00000011037	NCL	92	85.455	ENSCJAG00000013538	NCL	100	86.806	Callithrix_jacchus
ENSCAFG00000011037	NCL	96	97.965	ENSCAFG00020023145	NCL	99	97.965	Canis_lupus_dingo
ENSCAFG00000011037	NCL	91	96.903	ENSCHIG00000021052	-	97	96.154	Capra_hircus
ENSCAFG00000011037	NCL	92	81.487	ENSCHIG00000026149	-	93	81.791	Capra_hircus
ENSCAFG00000011037	NCL	85	88.633	ENSCHIG00000010894	-	100	89.717	Capra_hircus
ENSCAFG00000011037	NCL	92	65.344	ENSCHIG00000012143	-	92	73.025	Capra_hircus
ENSCAFG00000011037	NCL	90	74.650	ENSTSYG00000036886	-	86	81.081	Carlito_syrichta
ENSCAFG00000011037	NCL	94	85.417	ENSTSYG00000029779	-	98	84.274	Carlito_syrichta
ENSCAFG00000011037	NCL	92	87.557	ENSTSYG00000004355	-	92	87.405	Carlito_syrichta
ENSCAFG00000011037	NCL	91	79.358	ENSCAPG00000009405	NCL	100	80.532	Cavia_aperea
ENSCAFG00000011037	NCL	92	82.727	ENSCPOG00000001034	NCL	100	83.333	Cavia_porcellus
ENSCAFG00000011037	NCL	53	97.098	ENSCCAG00000021040	-	100	87.552	Cebus_capucinus
ENSCAFG00000011037	NCL	54	88.945	ENSCCAG00000000551	-	76	89.055	Cebus_capucinus
ENSCAFG00000011037	NCL	92	90.411	ENSCATG00000037033	NCL	100	90.795	Cercocebus_atys
ENSCAFG00000011037	NCL	92	82.879	ENSCLAG00000013080	NCL	100	82.639	Chinchilla_lanigera
ENSCAFG00000011037	NCL	62	97.273	ENSCSAG00000006660	NCL	95	97.273	Chlorocebus_sabaeus
ENSCAFG00000011037	NCL	62	77.045	ENSCHOG00000012860	NCL	88	76.471	Choloepus_hoffmanni
ENSCAFG00000011037	NCL	92	68.769	ENSCGRG00001022350	-	95	68.882	Cricetulus_griseus_chok1gshd
ENSCAFG00000011037	NCL	92	81.487	ENSCGRG00001024315	-	91	81.791	Cricetulus_griseus_chok1gshd
ENSCAFG00000011037	NCL	85	81.199	ENSCGRG00000017894	-	88	81.922	Cricetulus_griseus_crigri
ENSCAFG00000011037	NCL	92	67.616	ENSCGRG00000000507	-	93	67.121	Cricetulus_griseus_crigri
ENSCAFG00000011037	NCL	92	78.723	ENSDNOG00000046347	-	91	78.419	Dasypus_novemcinctus
ENSCAFG00000011037	NCL	92	87.082	ENSDNOG00000010783	-	100	86.072	Dasypus_novemcinctus
ENSCAFG00000011037	NCL	51	73.770	ENSDORG00000023596	-	92	68.865	Dipodomys_ordii
ENSCAFG00000011037	NCL	53	84.169	ENSDORG00000012513	-	91	77.710	Dipodomys_ordii
ENSCAFG00000011037	NCL	53	90.186	ENSETEG00000014756	-	86	90.237	Echinops_telfairi
ENSCAFG00000011037	NCL	72	66.667	ENSETEG00000008139	-	89	66.486	Echinops_telfairi
ENSCAFG00000011037	NCL	62	61.261	ENSETEG00000008553	-	88	61.124	Echinops_telfairi
ENSCAFG00000011037	NCL	85	80.656	ENSETEG00000018937	-	85	80.492	Echinops_telfairi
ENSCAFG00000011037	NCL	89	91.770	ENSEASG00005008488	NCL	93	98.214	Equus_asinus_asinus
ENSCAFG00000011037	NCL	92	91.667	ENSECAG00000021868	NCL	92	92.576	Equus_caballus
ENSCAFG00000011037	NCL	85	83.142	ENSEEUG00000005913	NCL	85	81.506	Erinaceus_europaeus
ENSCAFG00000011037	NCL	92	94.512	ENSFCAG00000027622	NCL	92	94.360	Felis_catus
ENSCAFG00000011037	NCL	91	85.321	ENSFDAG00000014291	NCL	92	82.875	Fukomys_damarensis
ENSCAFG00000011037	NCL	92	90.259	ENSGGOG00000004300	NCL	100	90.795	Gorilla_gorilla
ENSCAFG00000011037	NCL	91	76.453	ENSHGLG00000011069	-	62	79.955	Heterocephalus_glaber_female
ENSCAFG00000011037	NCL	92	85.455	ENSHGLG00000002031	-	100	83.889	Heterocephalus_glaber_female
ENSCAFG00000011037	NCL	72	84.800	ENSHGLG00100000745	-	82	84.881	Heterocephalus_glaber_male
ENSCAFG00000011037	NCL	92	85.455	ENSHGLG00100014537	-	100	83.333	Heterocephalus_glaber_male
ENSCAFG00000011037	NCL	55	82.097	ENSJJAG00000016165	Ncl	93	78.215	Jaculus_jaculus
ENSCAFG00000011037	NCL	91	74.504	ENSLAFG00000013061	NCL	91	73.212	Loxodonta_africana
ENSCAFG00000011037	NCL	92	90.563	ENSMFAG00000040385	NCL	100	91.074	Macaca_fascicularis
ENSCAFG00000011037	NCL	92	90.563	ENSMMUG00000018094	NCL	100	91.074	Macaca_mulatta
ENSCAFG00000011037	NCL	62	93.919	ENSMNEG00000023839	NCL	100	89.371	Macaca_nemestrina
ENSCAFG00000011037	NCL	92	90.563	ENSMLEG00000028935	NCL	100	90.934	Mandrillus_leucophaeus
ENSCAFG00000011037	NCL	92	71.037	ENSMICG00000029975	-	86	80.142	Microcebus_murinus
ENSCAFG00000011037	NCL	100	89.261	ENSMICG00000002538	-	92	88.737	Microcebus_murinus
ENSCAFG00000011037	NCL	92	78.300	MGP_CAROLIEiJ_G0014362	Ncl	92	80.273	Mus_caroli
ENSCAFG00000011037	NCL	92	77.390	ENSMUSG00000026234	Ncl	92	79.666	Mus_musculus
ENSCAFG00000011037	NCL	92	77.610	MGP_PahariEiJ_G0027599	Ncl	92	78.669	Mus_pahari
ENSCAFG00000011037	NCL	92	77.273	MGP_SPRETEiJ_G0015164	Ncl	92	79.091	Mus_spretus
ENSCAFG00000011037	NCL	92	87.897	ENSMLUG00000014547	NCL	92	89.107	Myotis_lucifugus
ENSCAFG00000011037	NCL	52	73.867	ENSNGAG00000006188	-	54	73.087	Nannospalax_galili
ENSCAFG00000011037	NCL	92	80.448	ENSNGAG00000002454	-	91	81.081	Nannospalax_galili
ENSCAFG00000011037	NCL	85	76.909	ENSNLEG00000014107	-	95	78.142	Nomascus_leucogenys
ENSCAFG00000011037	NCL	91	80.822	ENSODEG00000003281	-	91	80.699	Octodon_degus
ENSCAFG00000011037	NCL	100	76.351	ENSODEG00000002441	-	89	85.169	Octodon_degus
ENSCAFG00000011037	NCL	99	66.195	ENSODEG00000007803	-	100	65.841	Octodon_degus
ENSCAFG00000011037	NCL	92	79.421	ENSOCUG00000004312	NCL	100	79.609	Oryctolagus_cuniculus
ENSCAFG00000011037	NCL	77	88.127	ENSOGAG00000027852	NCL	83	88.127	Otolemur_garnettii
ENSCAFG00000011037	NCL	88	86.598	ENSOARG00000013270	-	100	91.209	Ovis_aries
ENSCAFG00000011037	NCL	54	80.570	ENSOARG00000004072	-	71	79.007	Ovis_aries
ENSCAFG00000011037	NCL	70	91.837	ENSOARG00000013710	-	73	90.745	Ovis_aries
ENSCAFG00000011037	NCL	91	83.182	ENSOARG00000020709	-	92	82.121	Ovis_aries
ENSCAFG00000011037	NCL	92	89.771	ENSPPAG00000011619	NCL	100	90.656	Pan_paniscus
ENSCAFG00000011037	NCL	92	94.809	ENSPPRG00000012603	NCL	92	94.809	Panthera_pardus
ENSCAFG00000011037	NCL	91	94.607	ENSPTIG00000010393	NCL	91	94.607	Panthera_tigris_altaica
ENSCAFG00000011037	NCL	92	90.868	ENSPTRG00000013025	NCL	100	91.213	Pan_troglodytes
ENSCAFG00000011037	NCL	92	90.563	ENSPANG00000010292	NCL	100	91.074	Papio_anubis
ENSCAFG00000011037	NCL	92	83.866	ENSPPYG00000013265	NCL	92	84.266	Pongo_abelii
ENSCAFG00000011037	NCL	92	88.939	ENSPCOG00000003051	-	91	88.333	Propithecus_coquereli
ENSCAFG00000011037	NCL	91	82.362	ENSPCOG00000004160	-	94	82.067	Propithecus_coquereli
ENSCAFG00000011037	NCL	92	89.985	ENSPVAG00000000297	NCL	100	90.264	Pteropus_vampyrus
ENSCAFG00000011037	NCL	92	79.758	ENSRNOG00000018273	Ncl	92	80.514	Rattus_norvegicus
ENSCAFG00000011037	NCL	92	85.191	ENSRBIG00000037525	-	91	85.191	Rhinopithecus_bieti
ENSCAFG00000011037	NCL	66	97.924	ENSRBIG00000035396	-	81	95.973	Rhinopithecus_bieti
ENSCAFG00000011037	NCL	95	86.278	ENSRROG00000036103	-	99	87.540	Rhinopithecus_roxellana
ENSCAFG00000011037	NCL	92	89.650	ENSRROG00000028756	-	91	90.715	Rhinopithecus_roxellana
ENSCAFG00000011037	NCL	53	96.834	ENSSBOG00000029193	-	100	88.858	Saimiri_boliviensis_boliviensis
ENSCAFG00000011037	NCL	55	75.342	ENSSBOG00000023094	-	76	75.566	Saimiri_boliviensis_boliviensis
ENSCAFG00000011037	NCL	70	86.957	ENSSBOG00000027549	-	96	89.294	Saimiri_boliviensis_boliviensis
ENSCAFG00000011037	NCL	92	89.307	ENSSSCG00000016275	NCL	92	89.608	Sus_scrofa
ENSCAFG00000011037	NCL	55	84.697	ENSTBEG00000001546	-	85	79.836	Tupaia_belangeri
ENSCAFG00000011037	NCL	65	81.870	ENSTBEG00000002469	-	66	81.714	Tupaia_belangeri
ENSCAFG00000011037	NCL	92	90.534	ENSTTRG00000009094	NCL	91	90.076	Tursiops_truncatus
ENSCAFG00000011037	NCL	70	96.223	ENSUAMG00000005639	NCL	100	96.223	Ursus_americanus
ENSCAFG00000011037	NCL	92	95.115	ENSUMAG00000015789	NCL	92	95.267	Ursus_maritimus
ENSCAFG00000011037	NCL	69	90.845	ENSVPAG00000001796	NCL	69	90.845	Vicugna_pacos
ENSCAFG00000011037	NCL	100	94.266	ENSVVUG00000025564	NCL	100	94.266	Vulpes_vulpes