EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000011205 (Gene tree)
Gene ID: 478158
Gene Symbol: PUM1
Alias: -
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 131703 bases
Position: chr2:69912518-70044220
Accession: 45206
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000016501	PUF	PF00806.19	4e-71	1	8
ENSCAFP00000016501	PUF	PF00806.19	4e-71	2	8
ENSCAFP00000016501	PUF	PF00806.19	4e-71	3	8
ENSCAFP00000016501	PUF	PF00806.19	4e-71	4	8
ENSCAFP00000016501	PUF	PF00806.19	4e-71	5	8
ENSCAFP00000016501	PUF	PF00806.19	4e-71	6	8
ENSCAFP00000016501	PUF	PF00806.19	4e-71	7	8
ENSCAFP00000016501	PUF	PF00806.19	4e-71	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000017823	-	5397	XM_005617672	ENSCAFP00000016501	1162 (aa)	XP_022268091	F6XHY4

Gene Model

Click here to download ENSCAFG00000011205's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000011205's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000011205	PUM1	89	75.326	ENSCAFG00000003839	PUM2	100	75.512

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000011205	PUM1	100	99.484	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSCAFG00000011205	PUM1	76	91.566	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSCAFG00000011205	PUM1	100	97.647	ENSAMEG00000017656	PUM1	97	97.647	Ailuropoda_melanoleuca
ENSCAFG00000011205	PUM1	100	72.849	ENSACIG00000021013	pum1	100	75.727	Amphilophus_citrinellus
ENSCAFG00000011205	PUM1	100	95.542	ENSAPLG00000009351	PUM1	100	95.542	Anas_platyrhynchos
ENSCAFG00000011205	PUM1	100	93.682	ENSACAG00000000682	PUM1	98	92.839	Anolis_carolinensis
ENSCAFG00000011205	PUM1	100	96.972	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSCAFG00000011205	PUM1	100	76.258	ENSAMXG00000020607	pum1	96	78.254	Astyanax_mexicanus
ENSCAFG00000011205	PUM1	100	97.056	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSCAFG00000011205	PUM1	100	97.140	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSCAFG00000011205	PUM1	92	95.450	ENSCAFG00020024616	PUM1	98	99.517	Canis_lupus_dingo
ENSCAFG00000011205	PUM1	100	97.056	ENSCHIG00000012952	PUM1	100	99.517	Capra_hircus
ENSCAFG00000011205	PUM1	100	96.888	ENSTSYG00000008868	PUM1	100	99.306	Carlito_syrichta
ENSCAFG00000011205	PUM1	100	96.720	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSCAFG00000011205	PUM1	100	99.398	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSCAFG00000011205	PUM1	100	96.804	ENSCLAG00000007662	PUM1	100	99.306	Chinchilla_lanigera
ENSCAFG00000011205	PUM1	100	96.333	ENSCSAG00000001028	PUM1	100	96.333	Chlorocebus_sabaeus
ENSCAFG00000011205	PUM1	93	92.098	ENSCHOG00000010245	PUM1	93	92.098	Choloepus_hoffmanni
ENSCAFG00000011205	PUM1	100	95.458	ENSCPBG00000009288	PUM1	100	98.309	Chrysemys_picta_bellii
ENSCAFG00000011205	PUM1	100	99.484	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSCAFG00000011205	PUM1	100	96.299	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSCAFG00000011205	PUM1	100	96.299	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSCAFG00000011205	PUM1	100	78.589	ENSDARG00000099256	pum1	100	78.757	Danio_rerio
ENSCAFG00000011205	PUM1	100	96.888	ENSDNOG00000010939	PUM1	100	96.888	Dasypus_novemcinctus
ENSCAFG00000011205	PUM1	85	98.792	ENSDORG00000001875	Pum1	100	98.792	Dipodomys_ordii
ENSCAFG00000011205	PUM1	88	91.024	ENSETEG00000004355	PUM1	87	91.024	Echinops_telfairi
ENSCAFG00000011205	PUM1	100	97.056	ENSEASG00005010813	PUM1	100	97.056	Equus_asinus_asinus
ENSCAFG00000011205	PUM1	100	97.056	ENSECAG00000021369	PUM1	100	97.056	Equus_caballus
ENSCAFG00000011205	PUM1	78	99.778	ENSEEUG00000003871	PUM1	74	99.778	Erinaceus_europaeus
ENSCAFG00000011205	PUM1	100	75.352	ENSELUG00000002409	pum1	100	83.437	Esox_lucius
ENSCAFG00000011205	PUM1	100	97.561	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSCAFG00000011205	PUM1	100	94.054	ENSFALG00000001214	PUM1	97	94.054	Ficedula_albicollis
ENSCAFG00000011205	PUM1	100	96.720	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSCAFG00000011205	PUM1	100	95.711	ENSGALG00000042598	PUM1	100	98.988	Gallus_gallus
ENSCAFG00000011205	PUM1	100	95.290	ENSGAGG00000001290	PUM1	100	98.785	Gopherus_agassizii
ENSCAFG00000011205	PUM1	100	97.140	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSCAFG00000011205	PUM1	100	96.552	ENSHGLG00000013819	Pum1	100	98.611	Heterocephalus_glaber_female
ENSCAFG00000011205	PUM1	100	96.552	ENSHGLG00100008621	Pum1	100	98.611	Heterocephalus_glaber_male
ENSCAFG00000011205	PUM1	100	76.525	ENSIPUG00000020421	pum1	100	77.212	Ictalurus_punctatus
ENSCAFG00000011205	PUM1	100	97.056	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSCAFG00000011205	PUM1	100	96.720	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSCAFG00000011205	PUM1	100	84.846	ENSLACG00000017188	PUM1	99	85.012	Latimeria_chalumnae
ENSCAFG00000011205	PUM1	100	86.227	ENSLOCG00000005210	pum1	99	85.786	Lepisosteus_oculatus
ENSCAFG00000011205	PUM1	100	96.636	ENSLAFG00000003178	PUM1	100	96.636	Loxodonta_africana
ENSCAFG00000011205	PUM1	100	96.899	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSCAFG00000011205	PUM1	100	96.899	ENSMMUG00000013520	PUM1	100	100.000	Macaca_mulatta
ENSCAFG00000011205	PUM1	100	97.140	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSCAFG00000011205	PUM1	100	99.484	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSCAFG00000011205	PUM1	100	95.791	ENSMGAG00000000724	PUM1	100	95.791	Meleagris_gallopavo
ENSCAFG00000011205	PUM1	100	96.636	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSCAFG00000011205	PUM1	99	94.945	ENSMICG00000012213	-	100	95.652	Microcebus_murinus
ENSCAFG00000011205	PUM1	100	97.140	ENSMICG00000007713	-	100	99.306	Microcebus_murinus
ENSCAFG00000011205	PUM1	100	96.552	ENSMOCG00000015463	Pum1	100	98.611	Microtus_ochrogaster
ENSCAFG00000011205	PUM1	77	88.276	ENSMMOG00000019817	pum1	100	90.843	Mola_mola
ENSCAFG00000011205	PUM1	100	95.382	ENSMODG00000017067	PUM1	100	95.382	Monodelphis_domestica
ENSCAFG00000011205	PUM1	100	96.299	MGP_CAROLIEiJ_G0026549	Pum1	100	98.611	Mus_caroli
ENSCAFG00000011205	PUM1	100	96.552	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSCAFG00000011205	PUM1	100	96.384	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSCAFG00000011205	PUM1	100	96.468	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSCAFG00000011205	PUM1	100	97.309	ENSMPUG00000015454	PUM1	100	97.309	Mustela_putorius_furo
ENSCAFG00000011205	PUM1	100	96.972	ENSMLUG00000006490	PUM1	100	96.972	Myotis_lucifugus
ENSCAFG00000011205	PUM1	100	97.056	ENSNGAG00000002378	Pum1	100	98.611	Nannospalax_galili
ENSCAFG00000011205	PUM1	57	88.403	ENSNBRG00000010689	pum1	100	81.807	Neolamprologus_brichardi
ENSCAFG00000011205	PUM1	100	95.795	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSCAFG00000011205	PUM1	84	96.284	ENSMEUG00000000976	-	80	96.284	Notamacropus_eugenii
ENSCAFG00000011205	PUM1	86	99.065	ENSOPRG00000001776	PUM1	73	99.065	Ochotona_princeps
ENSCAFG00000011205	PUM1	100	96.552	ENSODEG00000003465	PUM1	100	98.611	Octodon_degus
ENSCAFG00000011205	PUM1	81	75.102	ENSOANG00000004902	-	100	75.102	Ornithorhynchus_anatinus
ENSCAFG00000011205	PUM1	100	96.468	ENSOCUG00000008641	PUM1	99	96.468	Oryctolagus_cuniculus
ENSCAFG00000011205	PUM1	85	89.734	ENSORLG00000011482	pum1	100	75.000	Oryzias_latipes
ENSCAFG00000011205	PUM1	100	94.291	ENSOGAG00000011063	PUM1	100	94.291	Otolemur_garnettii
ENSCAFG00000011205	PUM1	100	96.384	ENSOARG00000001899	PUM1	100	99.517	Ovis_aries
ENSCAFG00000011205	PUM1	100	97.140	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSCAFG00000011205	PUM1	100	97.477	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSCAFG00000011205	PUM1	100	97.309	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSCAFG00000011205	PUM1	100	97.140	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSCAFG00000011205	PUM1	100	97.140	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSCAFG00000011205	PUM1	100	78.091	ENSPKIG00000010578	pum1	100	77.667	Paramormyrops_kingsleyae
ENSCAFG00000011205	PUM1	100	95.711	ENSPSIG00000014118	PUM1	100	95.711	Pelodiscus_sinensis
ENSCAFG00000011205	PUM1	57	86.517	ENSPMGG00000005836	pum1	100	80.270	Periophthalmus_magnuspinnatus
ENSCAFG00000011205	PUM1	100	96.720	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSCAFG00000011205	PUM1	100	95.466	ENSPCIG00000014151	PUM1	100	98.309	Phascolarctos_cinereus
ENSCAFG00000011205	PUM1	94	75.614	ENSPFOG00000007289	pum1	99	80.492	Poecilia_formosa
ENSCAFG00000011205	PUM1	100	71.878	ENSPLAG00000007256	pum1	100	76.843	Poecilia_latipinna
ENSCAFG00000011205	PUM1	90	76.454	ENSPMEG00000019543	pum1	99	77.143	Poecilia_mexicana
ENSCAFG00000011205	PUM1	57	88.023	ENSPREG00000005195	pum1	100	79.344	Poecilia_reticulata
ENSCAFG00000011205	PUM1	100	95.218	ENSPPYG00000001621	PUM1	100	95.218	Pongo_abelii
ENSCAFG00000011205	PUM1	76	99.691	ENSPCAG00000001979	PUM1	74	99.691	Procavia_capensis
ENSCAFG00000011205	PUM1	100	97.140	ENSPCOG00000004398	PUM1	100	99.306	Propithecus_coquereli
ENSCAFG00000011205	PUM1	100	94.954	ENSPVAG00000005207	PUM1	97	94.954	Pteropus_vampyrus
ENSCAFG00000011205	PUM1	100	76.762	ENSPNAG00000026728	pum1	100	79.433	Pygocentrus_nattereri
ENSCAFG00000011205	PUM1	100	96.468	ENSRNOG00000011709	Pum1	100	96.468	Rattus_norvegicus
ENSCAFG00000011205	PUM1	100	97.140	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSCAFG00000011205	PUM1	100	97.140	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSCAFG00000011205	PUM1	100	97.225	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSCAFG00000011205	PUM1	100	95.298	ENSSHAG00000010918	PUM1	100	95.298	Sarcophilus_harrisii
ENSCAFG00000011205	PUM1	60	88.783	ENSSLDG00000009667	pum1	100	77.259	Seriola_lalandi_dorsalis
ENSCAFG00000011205	PUM1	94	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSCAFG00000011205	PUM1	100	94.954	ENSSPUG00000006267	PUM1	100	94.954	Sphenodon_punctatus
ENSCAFG00000011205	PUM1	100	99.393	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSCAFG00000011205	PUM1	57	88.403	ENSTRUG00000013121	pum1	100	81.436	Takifugu_rubripes
ENSCAFG00000011205	PUM1	87	95.122	ENSTBEG00000013810	PUM1	89	95.122	Tupaia_belangeri
ENSCAFG00000011205	PUM1	92	96.901	ENSTTRG00000007436	PUM1	90	96.901	Tursiops_truncatus
ENSCAFG00000011205	PUM1	99	96.959	ENSUAMG00000018262	-	100	96.959	Ursus_americanus
ENSCAFG00000011205	PUM1	95	100.000	ENSUMAG00000009211	PUM1	100	100.000	Ursus_maritimus
ENSCAFG00000011205	PUM1	92	98.983	ENSVPAG00000005902	PUM1	92	98.983	Vicugna_pacos
ENSCAFG00000011205	PUM1	100	97.729	ENSVVUG00000014631	PUM1	100	100.000	Vulpes_vulpes
ENSCAFG00000011205	PUM1	100	86.268	ENSXETG00000012904	pum1	99	85.762	Xenopus_tropicalis
ENSCAFG00000011205	PUM1	60	88.403	ENSXMAG00000002945	pum1	100	76.532	Xiphophorus_maculatus