EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000011217 (Gene tree)
Gene ID: 480241
Gene Symbol: RBM23
Alias: -
Full Name: RNA binding motif protein 23
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 6271 bases
Position: chr8:3234954-3241224
Accession: 51678
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000016502	RRM_1	PF00076.22	1.6e-26	1	2
ENSCAFP00000016502	RRM_1	PF00076.22	1.6e-26	2	2
ENSCAFP00000040327	RRM_1	PF00076.22	2.1e-26	1	2
ENSCAFP00000040327	RRM_1	PF00076.22	2.1e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000048864	-	1377	-	ENSCAFP00000040327	458 (aa)	-	J9P448
ENSCAFT00000017824	-	1278	XM_005623219	ENSCAFP00000016502	425 (aa)	-	F6XHX3

Gene Model

Click here to download ENSCAFG00000011217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000011217's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000011217	RBM23	98	54.329	ENSCAFG00000008327	RBM39	59	64.110
ENSCAFG00000011217	RBM23	63	35.165	ENSCAFG00000001400	PUF60	50	35.227

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000011217	RBM23	100	87.059	ENSG00000100461	RBM23	100	100.000	Homo_sapiens
ENSCAFG00000011217	RBM23	100	87.013	ENSAMEG00000007322	RBM23	100	87.013	Ailuropoda_melanoleuca
ENSCAFG00000011217	RBM23	75	76.524	ENSACAG00000001569	RBM23	68	77.778	Anolis_carolinensis
ENSCAFG00000011217	RBM23	100	63.409	ENSANAG00000033790	-	72	70.927	Aotus_nancymaae
ENSCAFG00000011217	RBM23	100	83.621	ENSBTAG00000038333	RBM23	100	82.974	Bos_taurus
ENSCAFG00000011217	RBM23	100	81.917	ENSCJAG00000008482	RBM23	100	79.739	Callithrix_jacchus
ENSCAFG00000011217	RBM23	100	93.231	ENSCAFG00020007711	RBM23	100	93.231	Canis_lupus_dingo
ENSCAFG00000011217	RBM23	100	83.405	ENSCHIG00000025709	RBM23	100	82.974	Capra_hircus
ENSCAFG00000011217	RBM23	100	86.343	ENSTSYG00000014755	RBM23	100	89.259	Carlito_syrichta
ENSCAFG00000011217	RBM23	100	85.647	ENSCCAG00000025114	-	100	85.176	Cebus_capucinus
ENSCAFG00000011217	RBM23	100	69.860	ENSCCAG00000028584	-	100	74.815	Cebus_capucinus
ENSCAFG00000011217	RBM23	100	88.000	ENSCATG00000017832	RBM23	100	88.000	Cercocebus_atys
ENSCAFG00000011217	RBM23	100	84.565	ENSCSAG00000016213	RBM23	100	84.130	Chlorocebus_sabaeus
ENSCAFG00000011217	RBM23	100	62.759	ENSCPBG00000026096	RBM23	77	75.786	Chrysemys_picta_bellii
ENSCAFG00000011217	RBM23	95	86.386	ENSCANG00000001893	RBM23	100	86.386	Colobus_angolensis_palliatus
ENSCAFG00000011217	RBM23	100	82.969	ENSDNOG00000032457	RBM23	100	80.568	Dasypus_novemcinctus
ENSCAFG00000011217	RBM23	64	90.370	ENSDORG00000004926	-	100	90.370	Dipodomys_ordii
ENSCAFG00000011217	RBM23	64	58.608	ENSETEG00000017915	-	78	80.124	Echinops_telfairi
ENSCAFG00000011217	RBM23	96	83.447	ENSEASG00005011696	RBM23	95	83.447	Equus_asinus_asinus
ENSCAFG00000011217	RBM23	100	84.722	ENSECAG00000009910	RBM23	100	84.259	Equus_caballus
ENSCAFG00000011217	RBM23	100	80.828	ENSEEUG00000015560	RBM23	100	80.174	Erinaceus_europaeus
ENSCAFG00000011217	RBM23	100	89.535	ENSFCAG00000006632	RBM23	100	89.535	Felis_catus
ENSCAFG00000011217	RBM23	100	86.118	ENSGGOG00000015707	RBM23	100	87.059	Gorilla_gorilla
ENSCAFG00000011217	RBM23	100	76.201	ENSHGLG00100006114	RBM23	99	75.546	Heterocephalus_glaber_male
ENSCAFG00000011217	RBM23	64	89.259	ENSSTOG00000010354	RBM23	100	88.889	Ictidomys_tridecemlineatus
ENSCAFG00000011217	RBM23	100	79.861	ENSLAFG00000018567	RBM23	100	80.093	Loxodonta_africana
ENSCAFG00000011217	RBM23	100	88.056	ENSMFAG00000037595	RBM23	100	87.588	Macaca_fascicularis
ENSCAFG00000011217	RBM23	100	87.822	ENSMMUG00000018381	RBM23	100	86.183	Macaca_mulatta
ENSCAFG00000011217	RBM23	100	88.471	ENSMNEG00000042442	RBM23	100	88.235	Macaca_nemestrina
ENSCAFG00000011217	RBM23	100	87.413	ENSMLEG00000039954	RBM23	100	86.946	Mandrillus_leucophaeus
ENSCAFG00000011217	RBM23	100	85.185	ENSMICG00000006364	RBM23	100	87.037	Microcebus_murinus
ENSCAFG00000011217	RBM23	100	83.624	ENSMODG00000024448	RBM23	100	84.279	Monodelphis_domestica
ENSCAFG00000011217	RBM23	100	89.760	ENSMPUG00000007151	RBM23	100	89.760	Mustela_putorius_furo
ENSCAFG00000011217	RBM23	100	74.434	ENSMLUG00000012923	RBM23	100	72.609	Myotis_lucifugus
ENSCAFG00000011217	RBM23	100	86.449	ENSNLEG00000014792	RBM23	100	85.748	Nomascus_leucogenys
ENSCAFG00000011217	RBM23	51	97.143	ENSMEUG00000014548	-	50	95.833	Notamacropus_eugenii
ENSCAFG00000011217	RBM23	75	81.056	ENSOPRG00000001092	RBM23	71	83.019	Ochotona_princeps
ENSCAFG00000011217	RBM23	67	51.623	ENSOANG00000008908	-	93	51.974	Ornithorhynchus_anatinus
ENSCAFG00000011217	RBM23	79	85.546	ENSOCUG00000002006	RBM23	100	80.652	Oryctolagus_cuniculus
ENSCAFG00000011217	RBM23	99	74.115	ENSOGAG00000014794	RBM23	100	73.662	Otolemur_garnettii
ENSCAFG00000011217	RBM23	100	82.759	ENSOARG00000019398	RBM23	100	82.328	Ovis_aries
ENSCAFG00000011217	RBM23	100	86.916	ENSPPAG00000037922	RBM23	100	85.280	Pan_paniscus
ENSCAFG00000011217	RBM23	100	89.302	ENSPPRG00000023344	RBM23	100	89.302	Panthera_pardus
ENSCAFG00000011217	RBM23	100	85.349	ENSPTIG00000007831	RBM23	100	86.744	Panthera_tigris_altaica
ENSCAFG00000011217	RBM23	100	86.215	ENSPTRG00000006151	RBM23	100	85.514	Pan_troglodytes
ENSCAFG00000011217	RBM23	95	86.978	ENSPANG00000001324	RBM23	100	88.278	Papio_anubis
ENSCAFG00000011217	RBM23	100	83.442	ENSPCIG00000027773	RBM23	100	84.096	Phascolarctos_cinereus
ENSCAFG00000011217	RBM23	100	87.294	ENSPPYG00000005649	RBM23	100	87.294	Pongo_abelii
ENSCAFG00000011217	RBM23	100	62.903	ENSPCAG00000006669	RBM23	74	69.811	Procavia_capensis
ENSCAFG00000011217	RBM23	100	86.111	ENSPCOG00000018564	RBM23	100	88.889	Propithecus_coquereli
ENSCAFG00000011217	RBM23	100	82.135	ENSPVAG00000013785	RBM23	100	81.699	Pteropus_vampyrus
ENSCAFG00000011217	RBM23	100	87.354	ENSRBIG00000039276	RBM23	100	86.885	Rhinopithecus_bieti
ENSCAFG00000011217	RBM23	100	87.354	ENSRROG00000044026	RBM23	100	86.885	Rhinopithecus_roxellana
ENSCAFG00000011217	RBM23	83	90.476	ENSSBOG00000023037	-	98	90.476	Saimiri_boliviensis_boliviensis
ENSCAFG00000011217	RBM23	97	61.991	ENSSBOG00000034977	-	73	69.333	Saimiri_boliviensis_boliviensis
ENSCAFG00000011217	RBM23	73	86.751	ENSSHAG00000012932	RBM23	100	79.783	Sarcophilus_harrisii
ENSCAFG00000011217	RBM23	100	83.696	ENSSARG00000005165	RBM23	100	81.739	Sorex_araneus
ENSCAFG00000011217	RBM23	74	75.077	ENSSPUG00000000489	RBM23	71	75.851	Sphenodon_punctatus
ENSCAFG00000011217	RBM23	100	79.348	ENSSSCG00000026700	RBM23	100	80.870	Sus_scrofa
ENSCAFG00000011217	RBM23	81	85.876	ENSTBEG00000011543	RBM23	100	82.937	Tupaia_belangeri
ENSCAFG00000011217	RBM23	100	81.659	ENSTTRG00000001500	RBM23	100	81.441	Tursiops_truncatus
ENSCAFG00000011217	RBM23	100	87.991	ENSUAMG00000008524	RBM23	100	87.991	Ursus_americanus
ENSCAFG00000011217	RBM23	100	87.991	ENSUMAG00000014075	RBM23	100	87.991	Ursus_maritimus
ENSCAFG00000011217	RBM23	100	92.576	ENSVVUG00000019815	RBM23	100	92.576	Vulpes_vulpes
ENSCAFG00000011217	RBM23	70	71.242	ENSXETG00000022623	rbm23	71	70.846	Xenopus_tropicalis