EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Orthologs
Description
Ensembl ID
ENSCAFG00000011482 (Gene tree)
Gene ID
100170671
Gene Symbol
PABPN1
Alias
-
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Canis_familiaris
Status
putative
Strand
Plus strand
Length
5985 bases
Position
chr8:3581390-3587374
Accession
50550
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00000016868RRM_1PF00076.226.7e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00000018216-2810XM_005623168ENSCAFP00000016868306 (aa)XP_005623225E2R6I0
Gene Model
Click here to download ENSCAFG00000011482's gene model file
Pathways
Pathway IDPathway NameSource
cfa03015mRNA surveillance pathwayKEGG
cfa05164Influenza AKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000011482's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00000011482PABPN162100.000ENSG00000258643BCL2L2-PABPN157100.000Homo_sapiens
ENSCAFG00000011482PABPN110097.059ENSG00000100836PABPN1100100.000Homo_sapiens
ENSCAFG00000011482PABPN18670.833ENSAPOG00000016425pabpn18682.039Acanthochromis_polyacanthus
ENSCAFG00000011482PABPN162100.000ENSAMEG00000007048BCL2L2-PABPN1100100.000Ailuropoda_melanoleuca
ENSCAFG00000011482PABPN18170.400ENSACIG00000021744pabpn19482.143Amphilophus_citrinellus
ENSCAFG00000011482PABPN18670.833ENSAOCG00000015805pabpn18682.039Amphiprion_ocellaris
ENSCAFG00000011482PABPN18670.833ENSAPEG00000009623pabpn18682.039Amphiprion_percula
ENSCAFG00000011482PABPN18671.212ENSATEG00000020531pabpn18682.524Anabas_testudineus
ENSCAFG00000011482PABPN16688.670ENSACAG00000006185-7982.533Anolis_carolinensis
ENSCAFG00000011482PABPN110090.523ENSANAG00000024513-10090.523Aotus_nancymaae
ENSCAFG00000011482PABPN18170.120ENSACLG00000016374pabpn16581.865Astatotilapia_calliptera
ENSCAFG00000011482PABPN18671.970ENSAMXG00000000452pabpn19483.929Astyanax_mexicanus
ENSCAFG00000011482PABPN19871.237ENSBTAG00000050594-9386.486Bos_taurus
ENSCAFG00000011482PABPN110096.405ENSBTAG00000006884PABPN110096.405Bos_taurus
ENSCAFG00000011482PABPN16298.429ENSBTAG00000053753-7198.429Bos_taurus
ENSCAFG00000011482PABPN15898.315ENSCJAG00000004407-8998.315Callithrix_jacchus
ENSCAFG00000011482PABPN110097.059ENSCJAG00000007960-10097.059Callithrix_jacchus
ENSCAFG00000011482PABPN110097.059ENSCAFG00020006651-10097.059Canis_lupus_dingo
ENSCAFG00000011482PABPN110097.059ENSCAFG00020007298-10097.059Canis_lupus_dingo
ENSCAFG00000011482PABPN110096.732ENSCHIG00000012184PABPN110096.732Capra_hircus
ENSCAFG00000011482PABPN162100.000ENSTSYG00000033996BCL2L2-PABPN1100100.000Carlito_syrichta
ENSCAFG00000011482PABPN110095.425ENSCPOG00000025574PABPN110095.425Cavia_porcellus
ENSCAFG00000011482PABPN110097.059ENSCCAG00000033954BCL2L2-PABPN110097.059Cebus_capucinus
ENSCAFG00000011482PABPN110097.059ENSCATG00000038536BCL2L2-PABPN110097.059Cercocebus_atys
ENSCAFG00000011482PABPN16780.000ENSCLAG00000012423PABPN17179.221Chinchilla_lanigera
ENSCAFG00000011482PABPN110095.425ENSCSAG00000016036PABPN110095.425Chlorocebus_sabaeus
ENSCAFG00000011482PABPN16788.293ENSCHOG00000004798BCL2L2-PABPN18888.293Choloepus_hoffmanni
ENSCAFG00000011482PABPN15592.814ENSCPBG00000026060-9492.814Chrysemys_picta_bellii
ENSCAFG00000011482PABPN16562.687ENSCING00000012468-8465.174Ciona_intestinalis
ENSCAFG00000011482PABPN15860.674ENSCSAVG00000002001-9362.275Ciona_savignyi
ENSCAFG00000011482PABPN19681.695ENSCANG00000030980-8080.995Colobus_angolensis_palliatus
ENSCAFG00000011482PABPN162100.000ENSCANG00000009750BCL2L2-PABPN1100100.000Colobus_angolensis_palliatus
ENSCAFG00000011482PABPN110094.444ENSCGRG00001019696Pabpn110099.438Cricetulus_griseus_chok1gshd
ENSCAFG00000011482PABPN15899.438ENSCGRG00000011102Pabpn110099.438Cricetulus_griseus_crigri
ENSCAFG00000011482PABPN18670.455ENSCSEG00000008774pabpn18980.476Cynoglossus_semilaevis
ENSCAFG00000011482PABPN18668.182ENSCVAG00000003152pabpn18681.068Cyprinodon_variegatus
ENSCAFG00000011482PABPN18671.591ENSDARG00000045373pabpn18683.495Danio_rerio
ENSCAFG00000011482PABPN110097.059ENSDNOG00000023682PABPN110097.059Dasypus_novemcinctus
ENSCAFG00000011482PABPN110095.752ENSDORG00000028966-10095.752Dipodomys_ordii
ENSCAFG00000011482PABPN16263.351FBgn0005648Pabp28263.351Drosophila_melanogaster
ENSCAFG00000011482PABPN16379.487ENSEBUG00000002322pabpn18479.487Eptatretus_burgeri
ENSCAFG00000011482PABPN110097.059ENSEASG00005011716PABPN110097.059Equus_asinus_asinus
ENSCAFG00000011482PABPN19996.711ENSECAG00000011652PABPN19996.939Equus_caballus
ENSCAFG00000011482PABPN19388.380ENSEEUG00000012973-7792.035Erinaceus_europaeus
ENSCAFG00000011482PABPN18673.864ENSELUG00000022654pabpn18585.437Esox_lucius
ENSCAFG00000011482PABPN110097.059ENSFCAG00000031922PABPN110097.059Felis_catus
ENSCAFG00000011482PABPN15898.876ENSFDAG00000018381BCL2L2-PABPN110098.876Fukomys_damarensis
ENSCAFG00000011482PABPN18666.667ENSFHEG00000007215pabpn18680.097Fundulus_heteroclitus
ENSCAFG00000011482PABPN18270.751ENSGMOG00000003922pabpn16683.505Gadus_morhua
ENSCAFG00000011482PABPN18670.566ENSGAFG00000017099pabpn18682.126Gambusia_affinis
ENSCAFG00000011482PABPN18668.116ENSGACG00000002167pabpn18777.982Gasterosteus_aculeatus
ENSCAFG00000011482PABPN19276.761ENSGGOG00000039675-7880.365Gorilla_gorilla
ENSCAFG00000011482PABPN19381.338ENSGGOG00000025919-9884.459Gorilla_gorilla
ENSCAFG00000011482PABPN110097.059ENSGGOG00000022683-10097.059Gorilla_gorilla
ENSCAFG00000011482PABPN18671.212ENSHBUG00000019523pabpn18682.524Haplochromis_burtoni
ENSCAFG00000011482PABPN15576.048ENSHGLG00000009842-9376.048Heterocephalus_glaber_female
ENSCAFG00000011482PABPN110095.425ENSHGLG00000002927-10095.425Heterocephalus_glaber_female
ENSCAFG00000011482PABPN19274.823ENSHGLG00000018588-7680.444Heterocephalus_glaber_female
ENSCAFG00000011482PABPN15899.438ENSHGLG00100006673-10099.438Heterocephalus_glaber_male
ENSCAFG00000011482PABPN19270.714ENSHGLG00100015565-8079.565Heterocephalus_glaber_male
ENSCAFG00000011482PABPN15588.304ENSHGLG00100018935-9488.304Heterocephalus_glaber_male
ENSCAFG00000011482PABPN18667.681ENSHCOG00000004655pabpn18681.553Hippocampus_comes
ENSCAFG00000011482PABPN18671.591ENSIPUG00000008085PABPN18683.010Ictalurus_punctatus
ENSCAFG00000011482PABPN16481.313ENSIPUG00000000180-8681.313Ictalurus_punctatus
ENSCAFG00000011482PABPN158100.000ENSSTOG00000029847BCL2L2-PABPN1100100.000Ictidomys_tridecemlineatus
ENSCAFG00000011482PABPN158100.000ENSJJAG00000023507Gm20521100100.000Jaculus_jaculus
ENSCAFG00000011482PABPN18670.076ENSKMAG00000018748pabpn18681.643Kryptolebias_marmoratus
ENSCAFG00000011482PABPN18671.212ENSLBEG00000027266pabpn18682.524Labrus_bergylta
ENSCAFG00000011482PABPN15887.640ENSLACG00000000646pabpn19977.434Latimeria_chalumnae
ENSCAFG00000011482PABPN18271.429ENSLOCG00000000796pabpn16984.021Lepisosteus_oculatus
ENSCAFG00000011482PABPN16865.238ENSLOCG00000004694pabpn1l9565.700Lepisosteus_oculatus
ENSCAFG00000011482PABPN162100.000ENSMFAG00000032183BCL2L2-PABPN1100100.000Macaca_fascicularis
ENSCAFG00000011482PABPN19775.585ENSMMUG00000048382-7781.385Macaca_mulatta
ENSCAFG00000011482PABPN162100.000ENSMMUG00000014747BCL2L2-PABPN1100100.000Macaca_mulatta
ENSCAFG00000011482PABPN17482.796ENSMNEG00000035750-9992.908Macaca_nemestrina
ENSCAFG00000011482PABPN110097.059ENSMNEG00000045065BCL2L2-PABPN110097.059Macaca_nemestrina
ENSCAFG00000011482PABPN19773.311ENSMLEG00000034623-9990.780Mandrillus_leucophaeus
ENSCAFG00000011482PABPN162100.000ENSMLEG00000043862BCL2L2-PABPN1100100.000Mandrillus_leucophaeus
ENSCAFG00000011482PABPN18271.032ENSMAMG00000007979pabpn16881.773Mastacembelus_armatus
ENSCAFG00000011482PABPN18270.635ENSMZEG00005011904pabpn16682.474Maylandia_zebra
ENSCAFG00000011482PABPN19894.352ENSMAUG00000007383Gm205219994.352Mesocricetus_auratus
ENSCAFG00000011482PABPN110096.732ENSMICG00000010002BCL2L2-PABPN110096.732Microcebus_murinus
ENSCAFG00000011482PABPN110094.118ENSMOCG00000018557Gm2052110094.118Microtus_ochrogaster
ENSCAFG00000011482PABPN18671.591ENSMMOG00000005405pabpn18683.010Mola_mola
ENSCAFG00000011482PABPN16897.115ENSMODG00000004535-7495.175Monodelphis_domestica
ENSCAFG00000011482PABPN18270.635ENSMALG00000019612pabpn16781.773Monopterus_albus
ENSCAFG00000011482PABPN19290.036MGP_CAROLIEiJ_G0019277Pabpn110097.753Mus_caroli
ENSCAFG00000011482PABPN16297.884MGP_CAROLIEiJ_G0019276Gm205215797.884Mus_caroli
ENSCAFG00000011482PABPN110093.791ENSMUSG00000022194Pabpn110098.315Mus_musculus
ENSCAFG00000011482PABPN16298.413ENSMUSG00000092232Gm205215798.413Mus_musculus
ENSCAFG00000011482PABPN110093.791MGP_PahariEiJ_G0030295Pabpn110098.315Mus_pahari
ENSCAFG00000011482PABPN16298.413MGP_PahariEiJ_G0030294Gm205215798.413Mus_pahari
ENSCAFG00000011482PABPN110093.791MGP_SPRETEiJ_G0020166Pabpn110098.315Mus_spretus
ENSCAFG00000011482PABPN16298.413MGP_SPRETEiJ_G0020165Gm205215798.413Mus_spretus
ENSCAFG00000011482PABPN154100.000ENSMPUG00000006775-99100.000Mustela_putorius_furo
ENSCAFG00000011482PABPN19578.966ENSMLUG00000028677-8092.237Myotis_lucifugus
ENSCAFG00000011482PABPN16297.884ENSMLUG00000003800-10097.884Myotis_lucifugus
ENSCAFG00000011482PABPN19287.063ENSMLUG00000012452-7690.948Myotis_lucifugus
ENSCAFG00000011482PABPN162100.000ENSNGAG00000019529Gm2052157100.000Nannospalax_galili
ENSCAFG00000011482PABPN18270.635ENSNBRG00000023955pabpn19482.143Neolamprologus_brichardi
ENSCAFG00000011482PABPN169100.000ENSNLEG00000015007-8197.835Nomascus_leucogenys
ENSCAFG00000011482PABPN19775.338ENSNLEG00000030598-8282.569Nomascus_leucogenys
ENSCAFG00000011482PABPN19282.206ENSODEG00000003739-7785.398Octodon_degus
ENSCAFG00000011482PABPN110095.425ENSODEG00000002083BCL2L2-PABPN110095.425Octodon_degus
ENSCAFG00000011482PABPN15887.079ENSODEG00000011555-8986.826Octodon_degus
ENSCAFG00000011482PABPN18270.635ENSONIG00000008112pabpn16682.474Oreochromis_niloticus
ENSCAFG00000011482PABPN19994.079ENSOCUG00000016174PABPN110094.079Oryctolagus_cuniculus
ENSCAFG00000011482PABPN18568.582ENSORLG00000027900pabpn18479.902Oryzias_latipes
ENSCAFG00000011482PABPN17971.369ENSORLG00020004681pabpn16782.266Oryzias_latipes_hni
ENSCAFG00000011482PABPN18671.103ENSORLG00015000018pabpn18683.010Oryzias_latipes_hsok
ENSCAFG00000011482PABPN18568.199ENSOMEG00000016618pabpn17279.412Oryzias_melastigma
ENSCAFG00000011482PABPN110097.059ENSOGAG00000008710PABPN110097.059Otolemur_garnettii
ENSCAFG00000011482PABPN162100.000ENSOARG00000019336BCL2L2-PABPN152100.000Ovis_aries
ENSCAFG00000011482PABPN162100.000ENSPPAG00000028984BCL2L2-PABPN199100.000Pan_paniscus
ENSCAFG00000011482PABPN15583.234ENSPPAG00000039421-9383.234Pan_paniscus
ENSCAFG00000011482PABPN110097.059ENSPPRG00000010567PABPN110097.059Panthera_pardus
ENSCAFG00000011482PABPN158100.000ENSPTIG00000001063BCL2L2-PABPN1100100.000Panthera_tigris_altaica
ENSCAFG00000011482PABPN110097.059ENSPTRG00000006167BCL2L210097.059Pan_troglodytes
ENSCAFG00000011482PABPN19272.695ENSPTRG00000047273-7878.995Pan_troglodytes
ENSCAFG00000011482PABPN110097.059ENSPANG00000021100BCL2L2-PABPN110097.059Papio_anubis
ENSCAFG00000011482PABPN19778.041ENSPANG00000023326-9992.908Papio_anubis
ENSCAFG00000011482PABPN16463.131ENSPKIG00000008340pabpn1l9263.131Paramormyrops_kingsleyae
ENSCAFG00000011482PABPN18270.238ENSPKIG00000008144-6782.266Paramormyrops_kingsleyae
ENSCAFG00000011482PABPN18670.455ENSPKIG00000018052pabpn18682.524Paramormyrops_kingsleyae
ENSCAFG00000011482PABPN18269.841ENSPMGG00000022027pabpn16981.959Periophthalmus_magnuspinnatus
ENSCAFG00000011482PABPN110094.444ENSPEMG00000008332Gm2052110094.444Peromyscus_maniculatus_bairdii
ENSCAFG00000011482PABPN15477.778ENSPMAG00000006212pabpn18476.355Petromyzon_marinus
ENSCAFG00000011482PABPN110086.269ENSPCIG00000027751-10086.269Phascolarctos_cinereus
ENSCAFG00000011482PABPN18667.925ENSPFOG00000010351pabpn18680.676Poecilia_formosa
ENSCAFG00000011482PABPN18269.565ENSPLAG00000022696pabpn16880.882Poecilia_latipinna
ENSCAFG00000011482PABPN18667.925ENSPMEG00000020856pabpn18680.676Poecilia_mexicana
ENSCAFG00000011482PABPN18668.302ENSPREG00000011278pabpn18681.159Poecilia_reticulata
ENSCAFG00000011482PABPN18696.183ENSPPYG00000005663PABPN17797.717Pongo_abelii
ENSCAFG00000011482PABPN18885.185ENSPCAG00000005902PABPN19285.185Procavia_capensis
ENSCAFG00000011482PABPN110096.732ENSPCOG00000028047BCL2L2-PABPN110096.732Propithecus_coquereli
ENSCAFG00000011482PABPN16996.209ENSPVAG00000005270PABPN17593.939Pteropus_vampyrus
ENSCAFG00000011482PABPN18671.212ENSPNYG00000013182pabpn18682.524Pundamilia_nyererei
ENSCAFG00000011482PABPN16562.500ENSPNAG00000021666pabpn1l9464.179Pygocentrus_nattereri
ENSCAFG00000011482PABPN18672.348ENSPNAG00000023526pabpn18683.981Pygocentrus_nattereri
ENSCAFG00000011482PABPN110094.118ENSRNOG00000042195Pabpn110094.118Rattus_norvegicus
ENSCAFG00000011482PABPN19780.872ENSRBIG00000039547-8181.900Rhinopithecus_bieti
ENSCAFG00000011482PABPN19282.143ENSRBIG00000042811-9684.848Rhinopithecus_bieti
ENSCAFG00000011482PABPN158100.000ENSRBIG00000040762BCL2L2-PABPN155100.000Rhinopithecus_bieti
ENSCAFG00000011482PABPN19978.618ENSRROG00000040409-8182.353Rhinopithecus_roxellana
ENSCAFG00000011482PABPN158100.000ENSRROG00000045535BCL2L2-PABPN1100100.000Rhinopithecus_roxellana
ENSCAFG00000011482PABPN19279.286ENSRROG00000036409-8381.679Rhinopithecus_roxellana
ENSCAFG00000011482PABPN16293.564ENSSBOG00000026930BCL2L2-PABPN199100.000Saimiri_boliviensis_boliviensis
ENSCAFG00000011482PABPN17187.156ENSSHAG00000014841-8797.354Sarcophilus_harrisii
ENSCAFG00000011482PABPN18765.660ENSSHAG00000007707-9472.247Sarcophilus_harrisii
ENSCAFG00000011482PABPN16860.096ENSSFOG00015015833pabpn1l8466.310Scleropages_formosus
ENSCAFG00000011482PABPN17177.828ENSSFOG00015012565pabpn19081.553Scleropages_formosus
ENSCAFG00000011482PABPN18670.455ENSSFOG00015014718pabpn18682.039Scleropages_formosus
ENSCAFG00000011482PABPN18671.212ENSSMAG00000020157pabpn18682.524Scophthalmus_maximus
ENSCAFG00000011482PABPN18270.635ENSSDUG00000020582pabpn16781.773Seriola_dumerili
ENSCAFG00000011482PABPN18671.212ENSSLDG00000007118pabpn18682.524Seriola_lalandi_dorsalis
ENSCAFG00000011482PABPN15591.617ENSSPUG00000018308-9491.617Sphenodon_punctatus
ENSCAFG00000011482PABPN18671.212ENSSPAG00000021658pabpn18682.524Stegastes_partitus
ENSCAFG00000011482PABPN110097.059ENSSSCG00000002023PABPN110097.059Sus_scrofa
ENSCAFG00000011482PABPN19364.789ENSSSCG00000034805-7669.118Sus_scrofa
ENSCAFG00000011482PABPN15855.114ENSSSCG00000038472-9154.491Sus_scrofa
ENSCAFG00000011482PABPN18671.591ENSTRUG00000023664pabpn18683.010Takifugu_rubripes
ENSCAFG00000011482PABPN16879.524ENSTNIG00000005369pabpn19379.710Tetraodon_nigroviridis
ENSCAFG00000011482PABPN110096.405ENSUAMG00000024460PABPN110096.405Ursus_americanus
ENSCAFG00000011482PABPN162100.000ENSUMAG00000014288BCL2L2-PABPN157100.000Ursus_maritimus
ENSCAFG00000011482PABPN162100.000ENSVVUG00000019912BCL2L2-PABPN17698.446Vulpes_vulpes
ENSCAFG00000011482PABPN16490.306ENSXETG00000014597pabpn17586.486Xenopus_tropicalis
ENSCAFG00000011482PABPN15768.927ENSXCOG00000005158pabpn19874.251Xiphophorus_couchianus
ENSCAFG00000011482PABPN18668.679ENSXMAG00000006196pabpn18681.643Xiphophorus_maculatus

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