EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000011499 (Gene tree)
Gene ID: 485924
Gene Symbol: SNAI1
Alias: -
Full Name: snail family transcriptional repressor 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 5470 bases
Position: chr24:36498135-36503604
Accession: 46584
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000016886	zf-C2H2	PF00096.26	2.3e-19	1	3
ENSCAFP00000016886	zf-C2H2	PF00096.26	2.3e-19	2	3
ENSCAFP00000016886	zf-C2H2	PF00096.26	2.3e-19	3	3
ENSCAFP00000016886	zf-met	PF12874.7	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000018234	-	1735	XM_005635167	ENSCAFP00000016886	237 (aa)	XP_005635224	F1PY33

Gene Model

Click here to download ENSCAFG00000011499's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa04520	Adherens junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000011499's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000011499	SNAI1	50	35.577	ENSCAFG00000008559	ZNF319	61	35.780
ENSCAFG00000011499	SNAI1	94	50.833	ENSCAFG00000006638	SNAI2	86	52.340
ENSCAFG00000011499	SNAI1	54	39.252	ENSCAFG00000029288	-	70	39.252
ENSCAFG00000011499	SNAI1	53	43.810	ENSCAFG00000031471	-	82	43.810
ENSCAFG00000011499	SNAI1	53	48.148	ENSCAFG00000032037	-	97	48.148
ENSCAFG00000011499	SNAI1	53	40.187	ENSCAFG00000030117	ZNF599	66	40.187
ENSCAFG00000011499	SNAI1	50	45.763	ENSCAFG00000030057	ZNF234	84	45.763
ENSCAFG00000011499	SNAI1	52	47.945	ENSCAFG00000031857	ZNF235	57	47.945
ENSCAFG00000011499	SNAI1	66	39.423	ENSCAFG00000029340	-	71	39.744
ENSCAFG00000011499	SNAI1	55	42.105	ENSCAFG00000032123	-	83	42.105
ENSCAFG00000011499	SNAI1	52	40.385	ENSCAFG00000029649	-	93	39.623
ENSCAFG00000011499	SNAI1	54	42.105	ENSCAFG00000015170	ZNF81	52	42.105
ENSCAFG00000011499	SNAI1	81	44.444	ENSCAFG00000002561	-	72	37.864

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000011499	SNAI1	100	89.030	ENSG00000124216	SNAI1	90	89.030	Homo_sapiens
ENSCAFG00000011499	SNAI1	92	55.844	ENSAPOG00000003886	snai2	66	55.411	Acanthochromis_polyacanthus
ENSCAFG00000011499	SNAI1	100	98.312	ENSAMEG00000013478	SNAI1	90	98.312	Ailuropoda_melanoleuca
ENSCAFG00000011499	SNAI1	85	53.670	ENSACIG00000009443	-	54	67.361	Amphilophus_citrinellus
ENSCAFG00000011499	SNAI1	92	56.277	ENSACIG00000018641	snai2	84	55.844	Amphilophus_citrinellus
ENSCAFG00000011499	SNAI1	92	56.277	ENSAOCG00000017968	snai2	84	55.844	Amphiprion_ocellaris
ENSCAFG00000011499	SNAI1	92	56.277	ENSAPEG00000002983	snai2	84	55.844	Amphiprion_percula
ENSCAFG00000011499	SNAI1	88	56.109	ENSATEG00000006892	snai2	84	56.277	Anabas_testudineus
ENSCAFG00000011499	SNAI1	93	64.865	ENSAPLG00000014633	-	93	64.865	Anas_platyrhynchos
ENSCAFG00000011499	SNAI1	91	53.219	ENSAPLG00000003920	-	86	52.991	Anas_platyrhynchos
ENSCAFG00000011499	SNAI1	94	52.459	ENSACAG00000012332	-	86	53.419	Anolis_carolinensis
ENSCAFG00000011499	SNAI1	93	55.947	ENSACAG00000015607	SNAI1	89	54.506	Anolis_carolinensis
ENSCAFG00000011499	SNAI1	100	89.451	ENSANAG00000028666	SNAI1	90	89.451	Aotus_nancymaae
ENSCAFG00000011499	SNAI1	92	58.182	ENSACLG00000018551	snai2	83	57.273	Astatotilapia_calliptera
ENSCAFG00000011499	SNAI1	97	56.540	ENSAMXG00000038235	snai2	88	54.545	Astyanax_mexicanus
ENSCAFG00000011499	SNAI1	100	94.515	ENSBTAG00000014554	SNAI1	90	94.515	Bos_taurus
ENSCAFG00000011499	SNAI1	100	89.030	ENSCJAG00000000518	SNAI1	90	89.030	Callithrix_jacchus
ENSCAFG00000011499	SNAI1	100	100.000	ENSCAFG00020017479	SNAI1	90	100.000	Canis_lupus_dingo
ENSCAFG00000011499	SNAI1	100	94.515	ENSCHIG00000014308	SNAI1	90	94.515	Capra_hircus
ENSCAFG00000011499	SNAI1	100	90.717	ENSTSYG00000010834	SNAI1	90	90.717	Carlito_syrichta
ENSCAFG00000011499	SNAI1	99	88.559	ENSCAPG00000014002	SNAI1	92	88.559	Cavia_aperea
ENSCAFG00000011499	SNAI1	100	88.608	ENSCPOG00000026663	SNAI1	90	88.608	Cavia_porcellus
ENSCAFG00000011499	SNAI1	94	50.000	ENSCPOG00000033449	-	86	52.340	Cavia_porcellus
ENSCAFG00000011499	SNAI1	100	89.451	ENSCCAG00000029550	SNAI1	90	89.451	Cebus_capucinus
ENSCAFG00000011499	SNAI1	100	89.873	ENSCATG00000041452	SNAI1	90	89.873	Cercocebus_atys
ENSCAFG00000011499	SNAI1	100	89.451	ENSCLAG00000012285	SNAI1	90	89.451	Chinchilla_lanigera
ENSCAFG00000011499	SNAI1	100	89.873	ENSCSAG00000015065	SNAI1	90	89.873	Chlorocebus_sabaeus
ENSCAFG00000011499	SNAI1	92	52.119	ENSCHOG00000007046	-	88	53.419	Choloepus_hoffmanni
ENSCAFG00000011499	SNAI1	100	89.451	ENSCANG00000036400	SNAI1	90	89.451	Colobus_angolensis_palliatus
ENSCAFG00000011499	SNAI1	100	88.608	ENSCGRG00001007749	Snai1	90	88.608	Cricetulus_griseus_chok1gshd
ENSCAFG00000011499	SNAI1	100	88.608	ENSCGRG00000009080	Snai1	90	88.608	Cricetulus_griseus_crigri
ENSCAFG00000011499	SNAI1	92	54.348	ENSCSEG00000010311	snai2	84	56.034	Cynoglossus_semilaevis
ENSCAFG00000011499	SNAI1	92	54.386	ENSCVAG00000016483	snai2	81	53.778	Cyprinodon_variegatus
ENSCAFG00000011499	SNAI1	97	55.833	ENSDARG00000040046	snai2	88	55.696	Danio_rerio
ENSCAFG00000011499	SNAI1	99	73.109	ENSDNOG00000024891	-	89	72.269	Dasypus_novemcinctus
ENSCAFG00000011499	SNAI1	94	53.648	ENSDNOG00000035997	-	86	53.419	Dasypus_novemcinctus
ENSCAFG00000011499	SNAI1	100	91.139	ENSDNOG00000023834	-	90	91.139	Dasypus_novemcinctus
ENSCAFG00000011499	SNAI1	100	85.833	ENSDORG00000025372	Snai1	100	85.833	Dipodomys_ordii
ENSCAFG00000011499	SNAI1	94	48.069	ENSETEG00000005777	-	86	48.085	Echinops_telfairi
ENSCAFG00000011499	SNAI1	94	50.000	ENSEASG00005009186	-	86	52.340	Equus_asinus_asinus
ENSCAFG00000011499	SNAI1	94	50.000	ENSECAG00000010120	SNAI2	86	52.340	Equus_caballus
ENSCAFG00000011499	SNAI1	100	92.857	ENSECAG00000009787	SNAI1	90	92.857	Equus_caballus
ENSCAFG00000011499	SNAI1	100	97.046	ENSFCAG00000010558	SNAI1	90	97.046	Felis_catus
ENSCAFG00000011499	SNAI1	94	50.833	ENSFCAG00000015779	-	86	52.991	Felis_catus
ENSCAFG00000011499	SNAI1	91	53.219	ENSFALG00000005762	-	86	52.991	Ficedula_albicollis
ENSCAFG00000011499	SNAI1	100	90.295	ENSFDAG00000005851	SNAI1	90	90.295	Fukomys_damarensis
ENSCAFG00000011499	SNAI1	92	54.783	ENSFHEG00000012561	snai2	84	53.778	Fundulus_heteroclitus
ENSCAFG00000011499	SNAI1	73	58.960	ENSGMOG00000000127	-	55	68.382	Gadus_morhua
ENSCAFG00000011499	SNAI1	97	54.098	ENSGMOG00000002669	snai2	88	53.279	Gadus_morhua
ENSCAFG00000011499	SNAI1	94	62.667	ENSGALG00000008018	SNAI1	85	62.667	Gallus_gallus
ENSCAFG00000011499	SNAI1	92	55.652	ENSGAFG00000021427	snai2	84	55.844	Gambusia_affinis
ENSCAFG00000011499	SNAI1	92	53.304	ENSGACG00000017935	snai2	83	55.217	Gasterosteus_aculeatus
ENSCAFG00000011499	SNAI1	93	62.609	ENSGAGG00000022705	SNAI1	87	62.338	Gopherus_agassizii
ENSCAFG00000011499	SNAI1	100	90.295	ENSGGOG00000024422	SNAI1	90	90.295	Gorilla_gorilla
ENSCAFG00000011499	SNAI1	92	58.182	ENSHBUG00000007764	snai2	83	57.273	Haplochromis_burtoni
ENSCAFG00000011499	SNAI1	100	91.983	ENSHGLG00000005310	SNAI1	90	91.983	Heterocephalus_glaber_female
ENSCAFG00000011499	SNAI1	94	50.000	ENSHGLG00000009439	SNAI2	86	52.340	Heterocephalus_glaber_female
ENSCAFG00000011499	SNAI1	94	50.000	ENSHGLG00100007484	SNAI2	86	52.340	Heterocephalus_glaber_male
ENSCAFG00000011499	SNAI1	100	91.983	ENSHGLG00100018390	SNAI1	90	91.983	Heterocephalus_glaber_male
ENSCAFG00000011499	SNAI1	100	91.139	ENSSTOG00000005866	SNAI1	90	91.139	Ictidomys_tridecemlineatus
ENSCAFG00000011499	SNAI1	100	86.076	ENSJJAG00000017317	Snai1	90	88.186	Jaculus_jaculus
ENSCAFG00000011499	SNAI1	94	50.417	ENSJJAG00000017495	-	86	52.340	Jaculus_jaculus
ENSCAFG00000011499	SNAI1	92	53.947	ENSKMAG00000005164	snai2	84	55.603	Kryptolebias_marmoratus
ENSCAFG00000011499	SNAI1	92	56.637	ENSLBEG00000000972	snai2	89	56.388	Labrus_bergylta
ENSCAFG00000011499	SNAI1	94	58.874	ENSLACG00000017707	SNAI1	85	56.195	Latimeria_chalumnae
ENSCAFG00000011499	SNAI1	92	55.556	ENSLACG00000005413	snai2	84	55.217	Latimeria_chalumnae
ENSCAFG00000011499	SNAI1	85	58.454	ENSLOCG00000004443	snai1a	77	56.604	Lepisosteus_oculatus
ENSCAFG00000011499	SNAI1	100	89.873	ENSLAFG00000030265	SNAI1	90	89.873	Loxodonta_africana
ENSCAFG00000011499	SNAI1	100	89.873	ENSMFAG00000000994	SNAI1	90	89.873	Macaca_fascicularis
ENSCAFG00000011499	SNAI1	100	89.451	ENSMNEG00000036933	SNAI1	90	89.451	Macaca_nemestrina
ENSCAFG00000011499	SNAI1	100	89.873	ENSMLEG00000039236	SNAI1	90	89.873	Mandrillus_leucophaeus
ENSCAFG00000011499	SNAI1	92	56.277	ENSMAMG00000015632	snai2	84	55.844	Mastacembelus_armatus
ENSCAFG00000011499	SNAI1	92	58.182	ENSMZEG00005025060	snai2	83	57.273	Maylandia_zebra
ENSCAFG00000011499	SNAI1	94	62.667	ENSMGAG00000009447	SNAI1	85	62.667	Meleagris_gallopavo
ENSCAFG00000011499	SNAI1	91	53.219	ENSMGAG00000010813	-	86	52.991	Meleagris_gallopavo
ENSCAFG00000011499	SNAI1	100	89.030	ENSMAUG00000021592	Snai1	90	89.030	Mesocricetus_auratus
ENSCAFG00000011499	SNAI1	94	54.310	ENSMICG00000000335	-	86	53.191	Microcebus_murinus
ENSCAFG00000011499	SNAI1	100	90.295	ENSMICG00000042228	SNAI1	90	90.295	Microcebus_murinus
ENSCAFG00000011499	SNAI1	100	89.873	ENSMOCG00000007847	Snai1	90	89.873	Microtus_ochrogaster
ENSCAFG00000011499	SNAI1	96	65.217	ENSMODG00000016309	SNAI1	87	61.572	Monodelphis_domestica
ENSCAFG00000011499	SNAI1	92	58.182	ENSMALG00000021318	snai2	83	57.273	Monopterus_albus
ENSCAFG00000011499	SNAI1	100	88.608	MGP_CAROLIEiJ_G0024709	Snai1	90	88.608	Mus_caroli
ENSCAFG00000011499	SNAI1	100	89.030	ENSMUSG00000042821	Snai1	90	89.030	Mus_musculus
ENSCAFG00000011499	SNAI1	100	88.608	MGP_PahariEiJ_G0026151	Snai1	90	88.608	Mus_pahari
ENSCAFG00000011499	SNAI1	100	88.608	MGP_SPRETEiJ_G0025629	Snai1	90	88.608	Mus_spretus
ENSCAFG00000011499	SNAI1	100	98.734	ENSMPUG00000017558	SNAI1	90	98.734	Mustela_putorius_furo
ENSCAFG00000011499	SNAI1	99	85.593	ENSMLUG00000011649	-	89	84.322	Myotis_lucifugus
ENSCAFG00000011499	SNAI1	100	92.827	ENSMLUG00000015053	-	90	92.827	Myotis_lucifugus
ENSCAFG00000011499	SNAI1	100	91.139	ENSNGAG00000017185	Snai1	90	91.139	Nannospalax_galili
ENSCAFG00000011499	SNAI1	94	51.250	ENSNGAG00000009442	-	86	51.915	Nannospalax_galili
ENSCAFG00000011499	SNAI1	92	58.182	ENSNBRG00000011785	snai2	83	57.273	Neolamprologus_brichardi
ENSCAFG00000011499	SNAI1	100	90.295	ENSNLEG00000006985	SNAI1	90	90.295	Nomascus_leucogenys
ENSCAFG00000011499	SNAI1	99	89.496	ENSODEG00000007856	SNAI1	89	89.496	Octodon_degus
ENSCAFG00000011499	SNAI1	94	50.000	ENSODEG00000003654	-	86	52.340	Octodon_degus
ENSCAFG00000011499	SNAI1	92	55.844	ENSONIG00000009542	snai2	84	55.411	Oreochromis_niloticus
ENSCAFG00000011499	SNAI1	96	60.504	ENSOANG00000008681	SNAI1	91	59.833	Ornithorhynchus_anatinus
ENSCAFG00000011499	SNAI1	94	53.617	ENSOCUG00000012254	-	86	52.766	Oryctolagus_cuniculus
ENSCAFG00000011499	SNAI1	100	85.654	ENSOCUG00000005422	SNAI1	98	85.654	Oryctolagus_cuniculus
ENSCAFG00000011499	SNAI1	92	55.794	ENSORLG00000017475	snai2	84	55.411	Oryzias_latipes
ENSCAFG00000011499	SNAI1	92	55.794	ENSORLG00020008787	snai2	84	55.411	Oryzias_latipes_hni
ENSCAFG00000011499	SNAI1	92	55.794	ENSORLG00015008609	snai2	84	55.411	Oryzias_latipes_hsok
ENSCAFG00000011499	SNAI1	92	57.273	ENSOMEG00000006591	snai2	83	56.818	Oryzias_melastigma
ENSCAFG00000011499	SNAI1	100	89.030	ENSOGAG00000030111	SNAI1	90	89.030	Otolemur_garnettii
ENSCAFG00000011499	SNAI1	94	50.000	ENSOGAG00000010500	-	86	51.667	Otolemur_garnettii
ENSCAFG00000011499	SNAI1	100	91.139	ENSOARG00000013174	SNAI1	68	94.093	Ovis_aries
ENSCAFG00000011499	SNAI1	100	90.295	ENSPPAG00000041096	SNAI1	90	90.295	Pan_paniscus
ENSCAFG00000011499	SNAI1	100	97.046	ENSPPRG00000013272	SNAI1	90	97.046	Panthera_pardus
ENSCAFG00000011499	SNAI1	100	90.295	ENSPTRG00000050285	SNAI1	90	90.295	Pan_troglodytes
ENSCAFG00000011499	SNAI1	100	89.873	ENSPANG00000007536	SNAI1	90	89.873	Papio_anubis
ENSCAFG00000011499	SNAI1	93	61.472	ENSPSIG00000003607	SNAI1	84	60.684	Pelodiscus_sinensis
ENSCAFG00000011499	SNAI1	100	89.451	ENSPEMG00000023213	Snai1	90	89.451	Peromyscus_maniculatus_bairdii
ENSCAFG00000011499	SNAI1	96	65.217	ENSPCIG00000023282	SNAI1	87	61.572	Phascolarctos_cinereus
ENSCAFG00000011499	SNAI1	92	55.217	ENSPFOG00000014336	snai2	84	55.411	Poecilia_formosa
ENSCAFG00000011499	SNAI1	92	55.217	ENSPLAG00000009941	snai2	84	55.411	Poecilia_latipinna
ENSCAFG00000011499	SNAI1	92	55.217	ENSPMEG00000024022	snai2	84	55.411	Poecilia_mexicana
ENSCAFG00000011499	SNAI1	100	89.873	ENSPPYG00000011122	SNAI1	90	89.873	Pongo_abelii
ENSCAFG00000011499	SNAI1	99	89.831	ENSPCAG00000011934	SNAI1	99	89.831	Procavia_capensis
ENSCAFG00000011499	SNAI1	100	90.295	ENSPCOG00000020538	SNAI1	90	90.295	Propithecus_coquereli
ENSCAFG00000011499	SNAI1	100	92.469	ENSPVAG00000004119	SNAI1	90	92.469	Pteropus_vampyrus
ENSCAFG00000011499	SNAI1	92	58.182	ENSPNYG00000015217	snai2	83	57.273	Pundamilia_nyererei
ENSCAFG00000011499	SNAI1	97	56.250	ENSPNAG00000015896	snai2	88	54.286	Pygocentrus_nattereri
ENSCAFG00000011499	SNAI1	100	89.030	ENSRNOG00000009594	Snai1	93	89.030	Rattus_norvegicus
ENSCAFG00000011499	SNAI1	94	51.852	ENSRNOG00000047699	Snai2	86	52.340	Rattus_norvegicus
ENSCAFG00000011499	SNAI1	100	89.030	ENSRBIG00000026992	SNAI1	90	89.030	Rhinopithecus_bieti
ENSCAFG00000011499	SNAI1	100	89.030	ENSRROG00000043753	SNAI1	90	89.030	Rhinopithecus_roxellana
ENSCAFG00000011499	SNAI1	100	89.076	ENSSBOG00000034760	SNAI1	90	89.076	Saimiri_boliviensis_boliviensis
ENSCAFG00000011499	SNAI1	96	64.378	ENSSHAG00000011015	SNAI1	87	60.699	Sarcophilus_harrisii
ENSCAFG00000011499	SNAI1	92	57.589	ENSSFOG00015021578	snai1a	86	54.386	Scleropages_formosus
ENSCAFG00000011499	SNAI1	92	54.348	ENSSMAG00000019364	snai2	84	54.018	Scophthalmus_maximus
ENSCAFG00000011499	SNAI1	70	62.428	ENSSMAG00000008834	-	52	69.930	Scophthalmus_maximus
ENSCAFG00000011499	SNAI1	92	56.277	ENSSDUG00000018060	snai2	84	55.844	Seriola_dumerili
ENSCAFG00000011499	SNAI1	92	58.182	ENSSLDG00000012852	snai2	83	57.273	Seriola_lalandi_dorsalis
ENSCAFG00000011499	SNAI1	93	60.262	ENSSPUG00000018057	SNAI1	85	56.889	Sphenodon_punctatus
ENSCAFG00000011499	SNAI1	92	56.277	ENSSPAG00000022061	snai2	84	55.844	Stegastes_partitus
ENSCAFG00000011499	SNAI1	100	95.359	ENSSSCG00000032613	SNAI1	95	95.359	Sus_scrofa
ENSCAFG00000011499	SNAI1	91	53.219	ENSTGUG00000010914	-	86	52.991	Taeniopygia_guttata
ENSCAFG00000011499	SNAI1	93	59.729	ENSTGUG00000008724	SNAI1	84	59.729	Taeniopygia_guttata
ENSCAFG00000011499	SNAI1	92	54.585	ENSTRUG00000025588	snai2	84	55.411	Takifugu_rubripes
ENSCAFG00000011499	SNAI1	92	55.411	ENSTNIG00000008504	snai2	84	55.844	Tetraodon_nigroviridis
ENSCAFG00000011499	SNAI1	78	90.270	ENSTBEG00000012262	SNAI1	97	88.108	Tupaia_belangeri
ENSCAFG00000011499	SNAI1	100	94.937	ENSTTRG00000002029	SNAI1	90	94.937	Tursiops_truncatus
ENSCAFG00000011499	SNAI1	100	93.724	ENSUAMG00000026603	SNAI1	90	93.724	Ursus_americanus
ENSCAFG00000011499	SNAI1	99	98.729	ENSUMAG00000024458	SNAI1	96	98.729	Ursus_maritimus
ENSCAFG00000011499	SNAI1	100	99.578	ENSVVUG00000022410	SNAI1	90	99.578	Vulpes_vulpes
ENSCAFG00000011499	SNAI1	96	56.846	ENSXETG00000027366	snai1	87	54.468	Xenopus_tropicalis
ENSCAFG00000011499	SNAI1	92	55.217	ENSXCOG00000015084	snai2	84	55.411	Xiphophorus_couchianus
ENSCAFG00000011499	SNAI1	92	55.217	ENSXMAG00000019030	snai2	84	55.411	Xiphophorus_maculatus