EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000011688 (Gene tree)
Gene ID: 486900
Gene Symbol: TRUB1
Alias: -
Full Name: TruB pseudouridine synthase family member 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 37433 bases
Position: chr28:25690490-25727922
Accession: 47888
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000017180	TruB_N	PF01509.18	9.4e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000018547	-	4304	XM_005637759	ENSCAFP00000017180	350 (aa)	XP_005637816	E2QZY6

Gene Model

Click here to download ENSCAFG00000011688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000011688's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000011688	TRUB1	99	92.550	ENSG00000165832	TRUB1	99	92.550	Homo_sapiens
ENSCAFG00000011688	TRUB1	70	68.980	ENSAPOG00000020565	trub1	89	68.699	Acanthochromis_polyacanthus
ENSCAFG00000011688	TRUB1	96	95.858	ENSAMEG00000014931	TRUB1	99	95.442	Ailuropoda_melanoleuca
ENSCAFG00000011688	TRUB1	81	57.394	ENSACIG00000003060	trub1	94	57.394	Amphilophus_citrinellus
ENSCAFG00000011688	TRUB1	70	68.980	ENSAOCG00000017188	trub1	89	68.699	Amphiprion_ocellaris
ENSCAFG00000011688	TRUB1	70	68.293	ENSAPEG00000015209	trub1	89	68.293	Amphiprion_percula
ENSCAFG00000011688	TRUB1	69	69.295	ENSATEG00000023291	trub1	86	69.295	Anabas_testudineus
ENSCAFG00000011688	TRUB1	79	76.364	ENSAPLG00000006808	TRUB1	99	76.364	Anas_platyrhynchos
ENSCAFG00000011688	TRUB1	77	72.119	ENSACAG00000009282	TRUB1	97	72.119	Anolis_carolinensis
ENSCAFG00000011688	TRUB1	95	94.910	ENSANAG00000022870	TRUB1	99	93.696	Aotus_nancymaae
ENSCAFG00000011688	TRUB1	72	67.460	ENSACLG00000000823	trub1	91	67.460	Astatotilapia_calliptera
ENSCAFG00000011688	TRUB1	77	65.926	ENSAMXG00000015845	trub1	90	65.926	Astyanax_mexicanus
ENSCAFG00000011688	TRUB1	98	93.567	ENSBTAG00000012955	TRUB1	99	92.877	Bos_taurus
ENSCAFG00000011688	TRUB1	99	93.714	ENSCJAG00000047815	TRUB1	99	93.714	Callithrix_jacchus
ENSCAFG00000011688	TRUB1	100	99.714	ENSCAFG00020013237	TRUB1	100	99.714	Canis_lupus_dingo
ENSCAFG00000011688	TRUB1	98	93.275	ENSCHIG00000020884	TRUB1	99	92.857	Capra_hircus
ENSCAFG00000011688	TRUB1	99	92.000	ENSTSYG00000000446	TRUB1	99	90.571	Carlito_syrichta
ENSCAFG00000011688	TRUB1	72	85.771	ENSCAPG00000017088	TRUB1	99	85.771	Cavia_aperea
ENSCAFG00000011688	TRUB1	70	84.490	ENSCPOG00000040236	-	100	84.490	Cavia_porcellus
ENSCAFG00000011688	TRUB1	71	79.435	ENSCPOG00000030129	-	76	93.333	Cavia_porcellus
ENSCAFG00000011688	TRUB1	96	94.048	ENSCCAG00000028842	TRUB1	99	92.857	Cebus_capucinus
ENSCAFG00000011688	TRUB1	99	93.410	ENSCATG00000033431	TRUB1	99	93.410	Cercocebus_atys
ENSCAFG00000011688	TRUB1	70	88.163	ENSCLAG00000008664	TRUB1	100	88.163	Chinchilla_lanigera
ENSCAFG00000011688	TRUB1	99	93.696	ENSCSAG00000004891	TRUB1	99	93.696	Chlorocebus_sabaeus
ENSCAFG00000011688	TRUB1	100	78.286	ENSCHOG00000011931	TRUB1	100	78.286	Choloepus_hoffmanni
ENSCAFG00000011688	TRUB1	78	80.147	ENSCPBG00000003051	TRUB1	94	80.147	Chrysemys_picta_bellii
ENSCAFG00000011688	TRUB1	99	93.696	ENSCANG00000029445	TRUB1	99	93.696	Colobus_angolensis_palliatus
ENSCAFG00000011688	TRUB1	80	80.357	ENSCGRG00001010322	-	79	80.272	Cricetulus_griseus_chok1gshd
ENSCAFG00000011688	TRUB1	73	88.189	ENSCGRG00001016772	-	91	79.599	Cricetulus_griseus_chok1gshd
ENSCAFG00000011688	TRUB1	80	89.286	ENSCGRG00000010806	Trub1	91	88.294	Cricetulus_griseus_crigri
ENSCAFG00000011688	TRUB1	70	64.898	ENSCSEG00000011261	trub1	94	58.966	Cynoglossus_semilaevis
ENSCAFG00000011688	TRUB1	70	68.163	ENSCVAG00000008791	trub1	75	68.163	Cyprinodon_variegatus
ENSCAFG00000011688	TRUB1	80	64.286	ENSDARG00000053805	trub1	93	64.286	Danio_rerio
ENSCAFG00000011688	TRUB1	97	87.941	ENSDNOG00000001069	TRUB1	100	87.179	Dasypus_novemcinctus
ENSCAFG00000011688	TRUB1	99	88.539	ENSDORG00000010431	Trub1	99	87.679	Dipodomys_ordii
ENSCAFG00000011688	TRUB1	81	78.922	ENSETEG00000009183	TRUB1	81	77.941	Echinops_telfairi
ENSCAFG00000011688	TRUB1	96	94.659	ENSEASG00005014739	TRUB1	100	94.286	Equus_asinus_asinus
ENSCAFG00000011688	TRUB1	96	94.659	ENSECAG00000007177	TRUB1	100	94.286	Equus_caballus
ENSCAFG00000011688	TRUB1	99	77.095	ENSEEUG00000013993	TRUB1	99	77.374	Erinaceus_europaeus
ENSCAFG00000011688	TRUB1	70	70.204	ENSELUG00000000502	trub1	86	70.204	Esox_lucius
ENSCAFG00000011688	TRUB1	96	95.224	ENSFCAG00000031927	TRUB1	99	94.828	Felis_catus
ENSCAFG00000011688	TRUB1	69	77.083	ENSFALG00000002232	TRUB1	92	77.083	Ficedula_albicollis
ENSCAFG00000011688	TRUB1	69	87.243	ENSFDAG00000008140	TRUB1	99	87.243	Fukomys_damarensis
ENSCAFG00000011688	TRUB1	70	66.939	ENSFHEG00000004016	trub1	84	66.939	Fundulus_heteroclitus
ENSCAFG00000011688	TRUB1	78	75.000	ENSGALG00000009091	TRUB1	97	74.057	Gallus_gallus
ENSCAFG00000011688	TRUB1	68	65.417	ENSGAFG00000009193	trub1	86	64.754	Gambusia_affinis
ENSCAFG00000011688	TRUB1	56	68.718	ENSGACG00000015387	trub1	96	68.718	Gasterosteus_aculeatus
ENSCAFG00000011688	TRUB1	88	73.463	ENSGAGG00000009758	TRUB1	81	78.092	Gopherus_agassizii
ENSCAFG00000011688	TRUB1	99	93.123	ENSGGOG00000004583	TRUB1	99	93.123	Gorilla_gorilla
ENSCAFG00000011688	TRUB1	72	67.460	ENSHBUG00000016787	trub1	91	67.460	Haplochromis_burtoni
ENSCAFG00000011688	TRUB1	100	86.571	ENSHGLG00000015314	TRUB1	100	86.571	Heterocephalus_glaber_female
ENSCAFG00000011688	TRUB1	70	85.714	ENSHGLG00100009183	TRUB1	100	85.714	Heterocephalus_glaber_male
ENSCAFG00000011688	TRUB1	70	68.571	ENSHCOG00000017877	trub1	89	68.571	Hippocampus_comes
ENSCAFG00000011688	TRUB1	79	65.580	ENSIPUG00000017559	trub1	97	65.580	Ictalurus_punctatus
ENSCAFG00000011688	TRUB1	90	93.038	ENSSTOG00000003641	TRUB1	100	88.000	Ictidomys_tridecemlineatus
ENSCAFG00000011688	TRUB1	99	84.241	ENSJJAG00000011800	Trub1	99	83.954	Jaculus_jaculus
ENSCAFG00000011688	TRUB1	72	66.148	ENSKMAG00000006232	trub1	92	66.148	Kryptolebias_marmoratus
ENSCAFG00000011688	TRUB1	76	64.662	ENSLBEG00000026722	trub1	92	64.662	Labrus_bergylta
ENSCAFG00000011688	TRUB1	79	73.551	ENSLACG00000014885	TRUB1	92	73.551	Latimeria_chalumnae
ENSCAFG00000011688	TRUB1	78	70.696	ENSLOCG00000012979	trub1	93	70.696	Lepisosteus_oculatus
ENSCAFG00000011688	TRUB1	99	78.151	ENSLAFG00000015452	TRUB1	99	81.793	Loxodonta_africana
ENSCAFG00000011688	TRUB1	99	93.410	ENSMFAG00000031767	TRUB1	99	93.410	Macaca_fascicularis
ENSCAFG00000011688	TRUB1	99	93.696	ENSMMUG00000001902	TRUB1	99	93.696	Macaca_mulatta
ENSCAFG00000011688	TRUB1	99	89.685	ENSMNEG00000044646	TRUB1	99	89.685	Macaca_nemestrina
ENSCAFG00000011688	TRUB1	99	93.410	ENSMLEG00000042655	TRUB1	99	93.410	Mandrillus_leucophaeus
ENSCAFG00000011688	TRUB1	72	67.460	ENSMZEG00005024095	trub1	91	67.460	Maylandia_zebra
ENSCAFG00000011688	TRUB1	78	74.265	ENSMGAG00000011135	TRUB1	93	74.265	Meleagris_gallopavo
ENSCAFG00000011688	TRUB1	80	85.714	ENSMAUG00000011101	Trub1	88	85.284	Mesocricetus_auratus
ENSCAFG00000011688	TRUB1	100	93.429	ENSMICG00000016324	TRUB1	100	93.429	Microcebus_murinus
ENSCAFG00000011688	TRUB1	93	83.486	ENSMOCG00000017759	Trub1	89	88.176	Microtus_ochrogaster
ENSCAFG00000011688	TRUB1	82	83.916	ENSMODG00000009676	TRUB1	81	82.095	Monodelphis_domestica
ENSCAFG00000011688	TRUB1	99	81.375	MGP_CAROLIEiJ_G0023100	Trub1	88	87.500	Mus_caroli
ENSCAFG00000011688	TRUB1	99	80.229	ENSMUSG00000025086	Trub1	88	86.486	Mus_musculus
ENSCAFG00000011688	TRUB1	99	81.089	MGP_PahariEiJ_G0014588	Trub1	88	87.838	Mus_pahari
ENSCAFG00000011688	TRUB1	99	80.516	MGP_SPRETEiJ_G0024021	Trub1	88	86.824	Mus_spretus
ENSCAFG00000011688	TRUB1	99	97.135	ENSMPUG00000003556	TRUB1	99	97.135	Mustela_putorius_furo
ENSCAFG00000011688	TRUB1	95	90.419	ENSMLUG00000017686	TRUB1	99	87.429	Myotis_lucifugus
ENSCAFG00000011688	TRUB1	99	85.960	ENSNGAG00000018682	Trub1	99	85.960	Nannospalax_galili
ENSCAFG00000011688	TRUB1	70	68.699	ENSNBRG00000023393	trub1	88	68.699	Neolamprologus_brichardi
ENSCAFG00000011688	TRUB1	96	93.452	ENSNLEG00000016345	TRUB1	99	93.123	Nomascus_leucogenys
ENSCAFG00000011688	TRUB1	57	91.045	ENSMEUG00000006603	TRUB1	78	88.152	Notamacropus_eugenii
ENSCAFG00000011688	TRUB1	86	86.755	ENSOPRG00000009371	TRUB1	87	86.667	Ochotona_princeps
ENSCAFG00000011688	TRUB1	99	84.814	ENSODEG00000010854	TRUB1	99	84.814	Octodon_degus
ENSCAFG00000011688	TRUB1	70	68.293	ENSONIG00000007249	trub1	89	68.293	Oreochromis_niloticus
ENSCAFG00000011688	TRUB1	78	81.022	ENSOANG00000001556	TRUB1	90	81.022	Ornithorhynchus_anatinus
ENSCAFG00000011688	TRUB1	100	84.857	ENSOCUG00000009456	TRUB1	100	84.857	Oryctolagus_cuniculus
ENSCAFG00000011688	TRUB1	69	69.295	ENSORLG00000029719	trub1	86	69.295	Oryzias_latipes
ENSCAFG00000011688	TRUB1	69	68.880	ENSORLG00020016767	trub1	85	68.880	Oryzias_latipes_hni
ENSCAFG00000011688	TRUB1	69	68.880	ENSORLG00015014728	trub1	86	68.880	Oryzias_latipes_hsok
ENSCAFG00000011688	TRUB1	69	68.595	ENSOMEG00000014556	trub1	85	68.595	Oryzias_melastigma
ENSCAFG00000011688	TRUB1	100	94.000	ENSOGAG00000015895	TRUB1	100	94.000	Otolemur_garnettii
ENSCAFG00000011688	TRUB1	84	94.702	ENSOARG00000015591	TRUB1	99	89.326	Ovis_aries
ENSCAFG00000011688	TRUB1	99	93.123	ENSPPAG00000043645	TRUB1	99	93.123	Pan_paniscus
ENSCAFG00000011688	TRUB1	96	94.627	ENSPPRG00000007096	TRUB1	99	94.253	Panthera_pardus
ENSCAFG00000011688	TRUB1	96	94.925	ENSPTIG00000006378	TRUB1	99	94.540	Panthera_tigris_altaica
ENSCAFG00000011688	TRUB1	99	93.123	ENSPTRG00000002964	TRUB1	99	93.123	Pan_troglodytes
ENSCAFG00000011688	TRUB1	99	93.696	ENSPANG00000020712	TRUB1	99	93.696	Papio_anubis
ENSCAFG00000011688	TRUB1	78	77.574	ENSPSIG00000012877	TRUB1	93	77.574	Pelodiscus_sinensis
ENSCAFG00000011688	TRUB1	70	65.714	ENSPMGG00000000075	trub1	88	65.714	Periophthalmus_magnuspinnatus
ENSCAFG00000011688	TRUB1	86	85.667	ENSPEMG00000011156	Trub1	87	86.486	Peromyscus_maniculatus_bairdii
ENSCAFG00000011688	TRUB1	82	83.217	ENSPCIG00000009729	TRUB1	79	82.192	Phascolarctos_cinereus
ENSCAFG00000011688	TRUB1	70	66.531	ENSPFOG00000009950	trub1	90	66.531	Poecilia_formosa
ENSCAFG00000011688	TRUB1	78	63.004	ENSPLAG00000013855	trub1	86	66.531	Poecilia_latipinna
ENSCAFG00000011688	TRUB1	76	63.670	ENSPMEG00000009064	trub1	88	66.531	Poecilia_mexicana
ENSCAFG00000011688	TRUB1	70	67.347	ENSPREG00000003343	trub1	88	67.347	Poecilia_reticulata
ENSCAFG00000011688	TRUB1	96	93.155	ENSPPYG00000002676	TRUB1	99	92.837	Pongo_abelii
ENSCAFG00000011688	TRUB1	99	76.705	ENSPCAG00000008427	TRUB1	99	76.136	Procavia_capensis
ENSCAFG00000011688	TRUB1	100	88.286	ENSPCOG00000024360	TRUB1	100	88.286	Propithecus_coquereli
ENSCAFG00000011688	TRUB1	75	93.939	ENSPVAG00000007575	TRUB1	100	93.939	Pteropus_vampyrus
ENSCAFG00000011688	TRUB1	72	67.460	ENSPNYG00000018614	trub1	91	67.460	Pundamilia_nyererei
ENSCAFG00000011688	TRUB1	74	59.615	ENSPNAG00000006881	trub1	84	59.615	Pygocentrus_nattereri
ENSCAFG00000011688	TRUB1	99	82.235	ENSRNOG00000017321	Trub1	88	86.957	Rattus_norvegicus
ENSCAFG00000011688	TRUB1	99	83.381	ENSRBIG00000033423	TRUB1	99	83.381	Rhinopithecus_bieti
ENSCAFG00000011688	TRUB1	99	93.123	ENSRROG00000033902	TRUB1	99	93.123	Rhinopithecus_roxellana
ENSCAFG00000011688	TRUB1	96	94.345	ENSSBOG00000024237	TRUB1	99	93.143	Saimiri_boliviensis_boliviensis
ENSCAFG00000011688	TRUB1	73	82.031	ENSSHAG00000009346	TRUB1	86	82.031	Sarcophilus_harrisii
ENSCAFG00000011688	TRUB1	69	70.370	ENSSFOG00015022124	trub1	83	70.370	Scleropages_formosus
ENSCAFG00000011688	TRUB1	70	69.106	ENSSMAG00000001020	trub1	88	69.106	Scophthalmus_maximus
ENSCAFG00000011688	TRUB1	69	69.583	ENSSDUG00000016414	trub1	88	69.512	Seriola_dumerili
ENSCAFG00000011688	TRUB1	69	70.000	ENSSLDG00000015486	trub1	88	69.919	Seriola_lalandi_dorsalis
ENSCAFG00000011688	TRUB1	80	77.500	ENSSPUG00000001642	TRUB1	96	77.500	Sphenodon_punctatus
ENSCAFG00000011688	TRUB1	75	66.920	ENSSPAG00000001217	trub1	94	66.920	Stegastes_partitus
ENSCAFG00000011688	TRUB1	100	88.286	ENSSSCG00000010653	TRUB1	100	88.286	Sus_scrofa
ENSCAFG00000011688	TRUB1	77	76.667	ENSTGUG00000010971	TRUB1	97	76.471	Taeniopygia_guttata
ENSCAFG00000011688	TRUB1	72	78.656	ENSTBEG00000002880	TRUB1	99	78.656	Tupaia_belangeri
ENSCAFG00000011688	TRUB1	72	89.641	ENSTTRG00000005767	TRUB1	100	91.288	Tursiops_truncatus
ENSCAFG00000011688	TRUB1	99	97.135	ENSUAMG00000024876	TRUB1	99	97.135	Ursus_americanus
ENSCAFG00000011688	TRUB1	99	94.269	ENSUMAG00000002411	TRUB1	99	94.269	Ursus_maritimus
ENSCAFG00000011688	TRUB1	99	93.696	ENSVPAG00000005507	TRUB1	99	93.696	Vicugna_pacos
ENSCAFG00000011688	TRUB1	100	98.857	ENSVVUG00000010085	TRUB1	84	98.857	Vulpes_vulpes
ENSCAFG00000011688	TRUB1	78	66.912	ENSXETG00000023828	trub1	98	66.912	Xenopus_tropicalis
ENSCAFG00000011688	TRUB1	76	62.642	ENSXCOG00000017847	trub1	86	65.432	Xiphophorus_couchianus
ENSCAFG00000011688	TRUB1	76	62.921	ENSXMAG00000014701	trub1	88	65.714	Xiphophorus_maculatus