EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000011907 (Gene tree)
Gene ID: 607066
Gene Symbol: PCBP3
Alias: -
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 55413 bases
Position: chr31:39219834-39275246
Accession: 53035
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000017524	KH_1	PF00013.29	1.4e-55	1	3
ENSCAFP00000017524	KH_1	PF00013.29	1.4e-55	2	3
ENSCAFP00000017524	KH_1	PF00013.29	1.4e-55	3	3
ENSCAFP00000010187	KH_1	PF00013.29	1.4e-55	1	3
ENSCAFP00000010187	KH_1	PF00013.29	1.4e-55	2	3
ENSCAFP00000010187	KH_1	PF00013.29	1.4e-55	3	3
ENSCAFP00000017524	KH_2	PF07650.17	1.4e-15	1	1
ENSCAFP00000010187	KH_2	PF07650.17	2.3e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000018912	-	1831	XM_005639010	ENSCAFP00000017524	371 (aa)	XP_005639067	E2QUE1
ENSCAFT00000010991	-	1113	-	ENSCAFP00000010187	370 (aa)	-	E2RCH9

Gene Model

Click here to download ENSCAFG00000011907's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000011907's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000011907	PCBP3	66	30.968	ENSCAFG00000020361	FUBP1	52	40.625
ENSCAFG00000011907	PCBP3	89	36.567	ENSCAFG00000013297	IGF2BP2	69	36.567
ENSCAFG00000011907	PCBP3	85	40.351	ENSCAFG00000029157	NOVA1	59	40.351
ENSCAFG00000011907	PCBP3	89	33.813	ENSCAFG00000002766	IGF2BP3	59	33.813
ENSCAFG00000011907	PCBP3	91	74.481	ENSCAFG00000013587	-	99	74.481
ENSCAFG00000011907	PCBP3	86	60.815	ENSCAFG00000010019	PCBP4	73	60.815
ENSCAFG00000011907	PCBP3	67	48.571	ENSCAFG00000017503	-	55	48.571
ENSCAFG00000011907	PCBP3	91	66.301	ENSCAFG00000003326	PCBP1	99	66.301
ENSCAFG00000011907	PCBP3	91	78.107	ENSCAFG00000006821	-	99	78.107
ENSCAFG00000011907	PCBP3	87	32.258	ENSCAFG00000019942	FUBP3	85	30.159
ENSCAFG00000011907	PCBP3	67	35.938	ENSCAFG00000018667	KHSRP	59	35.938
ENSCAFG00000011907	PCBP3	67	52.857	ENSCAFG00000001399	HNRNPK	55	52.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000011907	PCBP3	100	97.305	ENSG00000183570	PCBP3	100	97.305	Homo_sapiens
ENSCAFG00000011907	PCBP3	91	71.930	ENSAPOG00000023735	zgc:110045	99	71.930	Acanthochromis_polyacanthus
ENSCAFG00000011907	PCBP3	91	68.605	ENSACIG00000002577	zgc:110045	96	73.148	Amphilophus_citrinellus
ENSCAFG00000011907	PCBP3	74	71.845	ENSAOCG00000005266	zgc:110045	97	71.845	Amphiprion_ocellaris
ENSCAFG00000011907	PCBP3	88	72.289	ENSAPEG00000000729	zgc:110045	72	72.289	Amphiprion_percula
ENSCAFG00000011907	PCBP3	86	67.213	ENSATEG00000011191	zgc:110045	65	67.213	Anabas_testudineus
ENSCAFG00000011907	PCBP3	88	72.892	ENSACLG00000019285	zgc:110045	72	72.892	Astatotilapia_calliptera
ENSCAFG00000011907	PCBP3	100	93.801	ENSBTAG00000030775	PCBP3	100	93.801	Bos_taurus
ENSCAFG00000011907	PCBP3	99	97.275	ENSCHIG00000015841	PCBP3	98	97.275	Capra_hircus
ENSCAFG00000011907	PCBP3	78	84.519	ENSTSYG00000005254	PCBP3	94	84.519	Carlito_syrichta
ENSCAFG00000011907	PCBP3	99	77.236	ENSCAPG00000006767	PCBP3	91	77.236	Cavia_aperea
ENSCAFG00000011907	PCBP3	100	97.035	ENSCPOG00000003648	PCBP3	100	97.035	Cavia_porcellus
ENSCAFG00000011907	PCBP3	100	97.574	ENSCCAG00000024561	PCBP3	100	97.574	Cebus_capucinus
ENSCAFG00000011907	PCBP3	100	97.305	ENSCATG00000038419	PCBP3	100	97.305	Cercocebus_atys
ENSCAFG00000011907	PCBP3	100	97.844	ENSCLAG00000006667	PCBP3	100	97.844	Chinchilla_lanigera
ENSCAFG00000011907	PCBP3	100	97.035	ENSCANG00000026757	PCBP3	100	97.035	Colobus_angolensis_palliatus
ENSCAFG00000011907	PCBP3	100	97.574	ENSCGRG00001006836	Pcbp3	100	97.574	Cricetulus_griseus_chok1gshd
ENSCAFG00000011907	PCBP3	100	97.574	ENSCGRG00000001837	Pcbp3	100	97.574	Cricetulus_griseus_crigri
ENSCAFG00000011907	PCBP3	91	71.345	ENSCSEG00000010020	zgc:110045	99	71.345	Cynoglossus_semilaevis
ENSCAFG00000011907	PCBP3	71	74.112	ENSCVAG00000004726	zgc:110045	89	74.112	Cyprinodon_variegatus
ENSCAFG00000011907	PCBP3	76	77.778	ENSDARG00000057141	zgc:110045	94	77.778	Danio_rerio
ENSCAFG00000011907	PCBP3	99	95.640	ENSDNOG00000049518	PCBP3	100	95.640	Dasypus_novemcinctus
ENSCAFG00000011907	PCBP3	81	82.927	ENSDORG00000003640	Pcbp3	99	82.927	Dipodomys_ordii
ENSCAFG00000011907	PCBP3	85	75.336	ENSEBUG00000009697	zgc:110045	99	76.382	Eptatretus_burgeri
ENSCAFG00000011907	PCBP3	100	92.453	ENSEASG00005007068	PCBP3	100	92.453	Equus_asinus_asinus
ENSCAFG00000011907	PCBP3	100	92.722	ENSECAG00000012413	PCBP3	100	92.722	Equus_caballus
ENSCAFG00000011907	PCBP3	88	71.257	ENSELUG00000019784	zgc:110045	72	71.257	Esox_lucius
ENSCAFG00000011907	PCBP3	100	98.652	ENSFCAG00000014812	PCBP3	100	98.652	Felis_catus
ENSCAFG00000011907	PCBP3	100	97.305	ENSFDAG00000009117	PCBP3	100	97.305	Fukomys_damarensis
ENSCAFG00000011907	PCBP3	88	67.257	ENSFHEG00000018838	-	99	67.257	Fundulus_heteroclitus
ENSCAFG00000011907	PCBP3	90	69.075	ENSGMOG00000005953	zgc:110045	98	69.075	Gadus_morhua
ENSCAFG00000011907	PCBP3	73	79.126	ENSGAFG00000017864	zgc:110045	93	77.725	Gambusia_affinis
ENSCAFG00000011907	PCBP3	91	71.720	ENSGACG00000003044	zgc:110045	99	71.720	Gasterosteus_aculeatus
ENSCAFG00000011907	PCBP3	100	97.305	ENSGGOG00000003683	PCBP3	100	97.305	Gorilla_gorilla
ENSCAFG00000011907	PCBP3	91	72.515	ENSHBUG00000012495	zgc:110045	99	72.515	Haplochromis_burtoni
ENSCAFG00000011907	PCBP3	99	97.011	ENSHGLG00000018620	PCBP3	99	97.011	Heterocephalus_glaber_female
ENSCAFG00000011907	PCBP3	99	97.011	ENSHGLG00100013590	PCBP3	99	97.011	Heterocephalus_glaber_male
ENSCAFG00000011907	PCBP3	81	73.684	ENSHCOG00000000818	zgc:110045	96	73.684	Hippocampus_comes
ENSCAFG00000011907	PCBP3	78	72.018	ENSIPUG00000003932	zgc:110045	81	72.018	Ictalurus_punctatus
ENSCAFG00000011907	PCBP3	100	97.305	ENSSTOG00000007178	PCBP3	100	97.305	Ictidomys_tridecemlineatus
ENSCAFG00000011907	PCBP3	100	97.305	ENSJJAG00000021192	Pcbp3	100	97.305	Jaculus_jaculus
ENSCAFG00000011907	PCBP3	76	80.952	ENSKMAG00000016179	-	90	80.952	Kryptolebias_marmoratus
ENSCAFG00000011907	PCBP3	91	71.848	ENSLBEG00000023074	zgc:110045	99	71.848	Labrus_bergylta
ENSCAFG00000011907	PCBP3	91	97.935	ENSLAFG00000020835	PCBP3	100	97.935	Loxodonta_africana
ENSCAFG00000011907	PCBP3	100	97.305	ENSMFAG00000034574	PCBP3	100	97.305	Macaca_fascicularis
ENSCAFG00000011907	PCBP3	100	97.305	ENSMMUG00000003825	PCBP3	100	97.305	Macaca_mulatta
ENSCAFG00000011907	PCBP3	100	97.305	ENSMNEG00000035551	PCBP3	100	97.305	Macaca_nemestrina
ENSCAFG00000011907	PCBP3	100	97.305	ENSMLEG00000038785	PCBP3	100	97.305	Mandrillus_leucophaeus
ENSCAFG00000011907	PCBP3	88	72.205	ENSMAMG00000014389	zgc:110045	99	72.205	Mastacembelus_armatus
ENSCAFG00000011907	PCBP3	88	72.892	ENSMZEG00005011785	zgc:110045	72	72.892	Maylandia_zebra
ENSCAFG00000011907	PCBP3	100	97.574	ENSMAUG00000007036	Pcbp3	100	97.574	Mesocricetus_auratus
ENSCAFG00000011907	PCBP3	100	97.574	ENSMICG00000012679	PCBP3	100	97.574	Microcebus_murinus
ENSCAFG00000011907	PCBP3	100	97.305	ENSMOCG00000016127	Pcbp3	100	97.305	Microtus_ochrogaster
ENSCAFG00000011907	PCBP3	74	80.556	ENSMMOG00000008399	zgc:110045	85	80.556	Mola_mola
ENSCAFG00000011907	PCBP3	77	76.166	ENSMALG00000008763	zgc:110045	90	76.166	Monopterus_albus
ENSCAFG00000011907	PCBP3	100	97.844	MGP_CAROLIEiJ_G0015475	Pcbp3	100	97.844	Mus_caroli
ENSCAFG00000011907	PCBP3	100	97.574	ENSMUSG00000001120	Pcbp3	100	97.574	Mus_musculus
ENSCAFG00000011907	PCBP3	100	97.844	MGP_PahariEiJ_G0030889	Pcbp3	100	97.844	Mus_pahari
ENSCAFG00000011907	PCBP3	100	97.844	MGP_SPRETEiJ_G0016288	Pcbp3	100	97.844	Mus_spretus
ENSCAFG00000011907	PCBP3	100	93.011	ENSMLUG00000003074	PCBP3	100	93.011	Myotis_lucifugus
ENSCAFG00000011907	PCBP3	100	97.305	ENSNGAG00000005416	Pcbp3	100	97.305	Nannospalax_galili
ENSCAFG00000011907	PCBP3	88	72.892	ENSNBRG00000017646	zgc:110045	72	72.892	Neolamprologus_brichardi
ENSCAFG00000011907	PCBP3	100	97.574	ENSNLEG00000002639	PCBP3	100	97.574	Nomascus_leucogenys
ENSCAFG00000011907	PCBP3	91	87.569	ENSMEUG00000012960	PCBP3	100	87.569	Notamacropus_eugenii
ENSCAFG00000011907	PCBP3	99	95.664	ENSODEG00000012873	PCBP3	100	95.664	Octodon_degus
ENSCAFG00000011907	PCBP3	88	72.892	ENSONIG00000010370	zgc:110045	76	72.892	Oreochromis_niloticus
ENSCAFG00000011907	PCBP3	86	90.288	ENSOANG00000006265	PCBP3	98	90.288	Ornithorhynchus_anatinus
ENSCAFG00000011907	PCBP3	88	72.289	ENSORLG00000014385	-	72	72.289	Oryzias_latipes
ENSCAFG00000011907	PCBP3	88	71.988	ENSORLG00020003139	zgc:110045	86	73.460	Oryzias_latipes_hni
ENSCAFG00000011907	PCBP3	88	71.988	ENSOMEG00000015459	-	72	71.988	Oryzias_melastigma
ENSCAFG00000011907	PCBP3	100	92.473	ENSOARG00000012704	PCBP3	100	92.473	Ovis_aries
ENSCAFG00000011907	PCBP3	100	97.305	ENSPPAG00000021940	PCBP3	100	97.305	Pan_paniscus
ENSCAFG00000011907	PCBP3	100	98.652	ENSPPRG00000003933	PCBP3	100	98.652	Panthera_pardus
ENSCAFG00000011907	PCBP3	100	83.957	ENSPTIG00000012038	PCBP3	100	84.906	Panthera_tigris_altaica
ENSCAFG00000011907	PCBP3	99	75.068	ENSPTRG00000014010	PCBP3	99	75.068	Pan_troglodytes
ENSCAFG00000011907	PCBP3	100	97.305	ENSPANG00000023631	PCBP3	100	97.305	Papio_anubis
ENSCAFG00000011907	PCBP3	76	74.627	ENSPMGG00000022531	-	92	74.627	Periophthalmus_magnuspinnatus
ENSCAFG00000011907	PCBP3	88	61.584	ENSPMGG00000021588	-	72	61.584	Periophthalmus_magnuspinnatus
ENSCAFG00000011907	PCBP3	100	97.574	ENSPEMG00000000587	Pcbp3	100	97.574	Peromyscus_maniculatus_bairdii
ENSCAFG00000011907	PCBP3	90	71.810	ENSPFOG00000002348	zgc:110045	98	71.810	Poecilia_formosa
ENSCAFG00000011907	PCBP3	72	73.934	ENSPLAG00000017488	zgc:110045	93	73.934	Poecilia_latipinna
ENSCAFG00000011907	PCBP3	88	71.166	ENSPMEG00000012762	zgc:110045	93	77.725	Poecilia_mexicana
ENSCAFG00000011907	PCBP3	88	72.289	ENSPREG00000001797	zgc:110045	94	77.358	Poecilia_reticulata
ENSCAFG00000011907	PCBP3	82	97.656	ENSPPYG00000011525	-	94	97.656	Pongo_abelii
ENSCAFG00000011907	PCBP3	88	76.000	ENSPCAG00000001454	PCBP3	100	76.000	Procavia_capensis
ENSCAFG00000011907	PCBP3	100	97.844	ENSPCOG00000013797	PCBP3	100	97.844	Propithecus_coquereli
ENSCAFG00000011907	PCBP3	78	89.565	ENSPVAG00000000832	PCBP3	83	89.565	Pteropus_vampyrus
ENSCAFG00000011907	PCBP3	81	74.408	ENSPNYG00000004637	zgc:110045	96	74.408	Pundamilia_nyererei
ENSCAFG00000011907	PCBP3	79	78.673	ENSPNAG00000004501	zgc:110045	94	78.673	Pygocentrus_nattereri
ENSCAFG00000011907	PCBP3	100	97.305	ENSRROG00000034567	PCBP3	100	97.305	Rhinopithecus_roxellana
ENSCAFG00000011907	PCBP3	100	97.305	ENSSBOG00000005789	PCBP3	100	97.305	Saimiri_boliviensis_boliviensis
ENSCAFG00000011907	PCBP3	88	72.289	ENSSMAG00000013541	zgc:110045	91	76.389	Scophthalmus_maximus
ENSCAFG00000011907	PCBP3	81	69.636	ENSSDUG00000019371	zgc:110045	66	69.636	Seriola_dumerili
ENSCAFG00000011907	PCBP3	88	72.590	ENSSLDG00000021064	zgc:110045	72	72.590	Seriola_lalandi_dorsalis
ENSCAFG00000011907	PCBP3	77	74.752	ENSSARG00000007629	-	100	74.752	Sorex_araneus
ENSCAFG00000011907	PCBP3	91	72.222	ENSSPAG00000000563	zgc:110045	99	72.222	Stegastes_partitus
ENSCAFG00000011907	PCBP3	100	92.722	ENSSSCG00000023041	PCBP3	100	92.722	Sus_scrofa
ENSCAFG00000011907	PCBP3	75	83.333	ENSTRUG00000017789	zgc:110045	92	83.333	Takifugu_rubripes
ENSCAFG00000011907	PCBP3	71	81.503	ENSTNIG00000003546	zgc:110045	85	81.503	Tetraodon_nigroviridis
ENSCAFG00000011907	PCBP3	63	77.253	ENSTBEG00000011882	-	73	77.253	Tupaia_belangeri
ENSCAFG00000011907	PCBP3	100	95.957	ENSUAMG00000006491	PCBP3	100	95.957	Ursus_americanus
ENSCAFG00000011907	PCBP3	100	86.667	ENSUMAG00000025403	PCBP3	100	86.667	Ursus_maritimus
ENSCAFG00000011907	PCBP3	99	92.663	ENSVVUG00000023862	PCBP3	95	92.663	Vulpes_vulpes
ENSCAFG00000011907	PCBP3	69	80.247	ENSXCOG00000005968	zgc:110045	82	80.247	Xiphophorus_couchianus
ENSCAFG00000011907	PCBP3	88	71.988	ENSXMAG00000008030	zgc:110045	72	71.988	Xiphophorus_maculatus