EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000012385 (Gene tree)
Gene ID: 100685609
Gene Symbol: BLM
Alias: -
Full Name: BLM RecQ like helicase
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 99757 bases
Position: chr3:53406975-53506731
Accession: 57173
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000018251	HRDC	PF00570.23	7.5e-12	1	1
ENSCAFP00000043065	HRDC	PF00570.23	7.6e-12	1	1
ENSCAFP00000018251	BDHCT	PF08072.11	1.6e-21	1	1
ENSCAFP00000043065	BDHCT	PF08072.11	1.6e-21	1	1
ENSCAFP00000018251	DEAD	PF00270.29	1e-19	1	1
ENSCAFP00000043065	DEAD	PF00270.29	1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000042800	-	5656	XM_003434379	ENSCAFP00000043065	1420 (aa)	XP_003434427	J9PB86
ENSCAFT00000019677	-	4224	XM_005618373	ENSCAFP00000018251	1407 (aa)	-	E2RS76

Gene Model

Click here to download ENSCAFG00000012385's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03440	Homologous recombination	KEGG
cfa03460	Fanconi anemia pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000012385's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000012385	BLM	100	82.581	ENSG00000197299	BLM	100	82.581	Homo_sapiens
ENSCAFG00000012385	BLM	55	64.286	ENSAPOG00000017966	blm	58	64.286	Acanthochromis_polyacanthus
ENSCAFG00000012385	BLM	100	90.416	ENSAMEG00000013843	BLM	100	89.782	Ailuropoda_melanoleuca
ENSCAFG00000012385	BLM	64	63.682	ENSACIG00000023762	blm	65	63.868	Amphilophus_citrinellus
ENSCAFG00000012385	BLM	55	64.504	ENSAOCG00000003318	blm	57	64.504	Amphiprion_ocellaris
ENSCAFG00000012385	BLM	55	64.504	ENSAPEG00000018105	blm	56	64.504	Amphiprion_percula
ENSCAFG00000012385	BLM	84	65.394	ENSATEG00000006421	blm	84	65.394	Anabas_testudineus
ENSCAFG00000012385	BLM	81	58.194	ENSAPLG00000006878	BLM	83	68.230	Anas_platyrhynchos
ENSCAFG00000012385	BLM	75	58.310	ENSACAG00000014275	BLM	99	49.694	Anolis_carolinensis
ENSCAFG00000012385	BLM	100	82.287	ENSANAG00000038415	BLM	100	82.280	Aotus_nancymaae
ENSCAFG00000012385	BLM	84	64.968	ENSACLG00000020354	blm	84	64.766	Astatotilapia_calliptera
ENSCAFG00000012385	BLM	52	67.263	ENSAMXG00000016970	blm	59	61.520	Astyanax_mexicanus
ENSCAFG00000012385	BLM	93	84.262	ENSBTAG00000020301	BLM	100	84.262	Bos_taurus
ENSCAFG00000012385	BLM	100	81.876	ENSCJAG00000009803	BLM	100	81.805	Callithrix_jacchus
ENSCAFG00000012385	BLM	100	99.930	ENSCAFG00020016111	BLM	100	100.000	Canis_lupus_dingo
ENSCAFG00000012385	BLM	100	83.004	ENSCHIG00000010329	BLM	100	84.590	Capra_hircus
ENSCAFG00000012385	BLM	100	81.043	ENSTSYG00000012368	BLM	100	81.043	Carlito_syrichta
ENSCAFG00000012385	BLM	88	84.097	ENSCAPG00000017976	BLM	100	84.097	Cavia_aperea
ENSCAFG00000012385	BLM	100	76.093	ENSCPOG00000001761	BLM	100	76.093	Cavia_porcellus
ENSCAFG00000012385	BLM	100	81.625	ENSCCAG00000023069	BLM	100	81.713	Cebus_capucinus
ENSCAFG00000012385	BLM	100	82.216	ENSCATG00000040609	BLM	92	94.609	Cercocebus_atys
ENSCAFG00000012385	BLM	100	77.097	ENSCLAG00000012111	BLM	100	77.308	Chinchilla_lanigera
ENSCAFG00000012385	BLM	100	82.163	ENSCSAG00000017040	BLM	100	82.163	Chlorocebus_sabaeus
ENSCAFG00000012385	BLM	91	77.941	ENSCHOG00000006255	BLM	93	77.941	Choloepus_hoffmanni
ENSCAFG00000012385	BLM	89	54.829	ENSCPBG00000025000	BLM	84	73.846	Chrysemys_picta_bellii
ENSCAFG00000012385	BLM	88	72.458	ENSCANG00000034808	BLM	100	90.055	Colobus_angolensis_palliatus
ENSCAFG00000012385	BLM	100	76.636	ENSCGRG00001024897	Blm	100	77.199	Cricetulus_griseus_chok1gshd
ENSCAFG00000012385	BLM	67	71.787	ENSCGRG00000016261	Blm	97	72.623	Cricetulus_griseus_crigri
ENSCAFG00000012385	BLM	89	48.487	ENSCSEG00000013483	blm	85	51.871	Cynoglossus_semilaevis
ENSCAFG00000012385	BLM	84	64.349	ENSDARG00000077089	blm	83	64.475	Danio_rerio
ENSCAFG00000012385	BLM	99	79.609	ENSDNOG00000010159	BLM	99	79.609	Dasypus_novemcinctus
ENSCAFG00000012385	BLM	74	80.287	ENSDORG00000011033	Blm	100	80.287	Dipodomys_ordii
ENSCAFG00000012385	BLM	52	41.987	FBgn0002906	Blm	51	41.313	Drosophila_melanogaster
ENSCAFG00000012385	BLM	82	85.000	ENSETEG00000015019	BLM	82	85.000	Echinops_telfairi
ENSCAFG00000012385	BLM	100	82.851	ENSEASG00005006727	BLM	100	86.826	Equus_asinus_asinus
ENSCAFG00000012385	BLM	100	85.175	ENSECAG00000011405	BLM	100	85.524	Equus_caballus
ENSCAFG00000012385	BLM	98	75.725	ENSEEUG00000001434	BLM	97	75.797	Erinaceus_europaeus
ENSCAFG00000012385	BLM	77	65.404	ENSELUG00000019098	blm	71	64.817	Esox_lucius
ENSCAFG00000012385	BLM	100	86.088	ENSFCAG00000006087	BLM	100	86.826	Felis_catus
ENSCAFG00000012385	BLM	80	56.083	ENSFALG00000010981	BLM	89	55.556	Ficedula_albicollis
ENSCAFG00000012385	BLM	100	69.657	ENSFDAG00000012658	BLM	100	70.287	Fukomys_damarensis
ENSCAFG00000012385	BLM	99	45.430	ENSFHEG00000002553	blm	99	45.106	Fundulus_heteroclitus
ENSCAFG00000012385	BLM	84	62.038	ENSGMOG00000016431	blm	90	60.459	Gadus_morhua
ENSCAFG00000012385	BLM	80	57.289	ENSGALG00000008256	BLM	57	71.574	Gallus_gallus
ENSCAFG00000012385	BLM	58	62.728	ENSGAFG00000001117	blm	62	63.139	Gambusia_affinis
ENSCAFG00000012385	BLM	60	64.286	ENSGACG00000010863	blm	100	72.779	Gasterosteus_aculeatus
ENSCAFG00000012385	BLM	64	62.923	ENSGAGG00000005383	BLM	87	71.366	Gopherus_agassizii
ENSCAFG00000012385	BLM	100	82.569	ENSGGOG00000007710	BLM	92	95.418	Gorilla_gorilla
ENSCAFG00000012385	BLM	83	64.892	ENSHBUG00000015943	blm	85	64.766	Haplochromis_burtoni
ENSCAFG00000012385	BLM	100	78.436	ENSHGLG00000013231	BLM	99	78.436	Heterocephalus_glaber_female
ENSCAFG00000012385	BLM	74	55.355	ENSHCOG00000011455	blm	83	60.941	Hippocampus_comes
ENSCAFG00000012385	BLM	77	51.971	ENSIPUG00000000529	blm	68	63.822	Ictalurus_punctatus
ENSCAFG00000012385	BLM	100	79.958	ENSSTOG00000005000	BLM	100	79.958	Ictidomys_tridecemlineatus
ENSCAFG00000012385	BLM	66	85.443	ENSJJAG00000016322	Blm	94	86.551	Jaculus_jaculus
ENSCAFG00000012385	BLM	55	64.841	ENSKMAG00000016608	blm	59	62.143	Kryptolebias_marmoratus
ENSCAFG00000012385	BLM	60	66.862	ENSLACG00000006490	BLM	99	50.607	Latimeria_chalumnae
ENSCAFG00000012385	BLM	88	61.927	ENSLOCG00000014302	blm	85	61.366	Lepisosteus_oculatus
ENSCAFG00000012385	BLM	100	82.357	ENSMFAG00000042982	BLM	92	95.148	Macaca_fascicularis
ENSCAFG00000012385	BLM	100	82.428	ENSMMUG00000019526	BLM	92	95.148	Macaca_mulatta
ENSCAFG00000012385	BLM	98	79.725	ENSMNEG00000031251	BLM	92	94.879	Macaca_nemestrina
ENSCAFG00000012385	BLM	100	79.958	ENSMLEG00000032934	BLM	100	79.958	Mandrillus_leucophaeus
ENSCAFG00000012385	BLM	56	65.565	ENSMAMG00000008726	blm	80	52.865	Mastacembelus_armatus
ENSCAFG00000012385	BLM	84	64.713	ENSMZEG00005022323	blm	84	64.512	Maylandia_zebra
ENSCAFG00000012385	BLM	100	76.247	ENSMAUG00000008953	Blm	99	76.528	Mesocricetus_auratus
ENSCAFG00000012385	BLM	100	80.929	ENSMICG00000034442	BLM	100	81.422	Microcebus_murinus
ENSCAFG00000012385	BLM	100	75.458	ENSMOCG00000016367	Blm	99	75.176	Microtus_ochrogaster
ENSCAFG00000012385	BLM	66	65.146	ENSMMOG00000006959	blm	67	65.019	Mola_mola
ENSCAFG00000012385	BLM	99	64.610	ENSMODG00000019449	BLM	99	65.277	Monodelphis_domestica
ENSCAFG00000012385	BLM	88	62.898	ENSMALG00000007323	blm	88	62.706	Monopterus_albus
ENSCAFG00000012385	BLM	100	73.525	MGP_CAROLIEiJ_G0029907	Blm	100	74.175	Mus_caroli
ENSCAFG00000012385	BLM	100	73.655	ENSMUSG00000030528	Blm	100	74.458	Mus_musculus
ENSCAFG00000012385	BLM	100	74.930	MGP_PahariEiJ_G0013129	Blm	100	75.140	Mus_pahari
ENSCAFG00000012385	BLM	100	73.688	MGP_SPRETEiJ_G0031009	Blm	100	74.526	Mus_spretus
ENSCAFG00000012385	BLM	84	88.446	ENSMPUG00000015657	BLM	99	88.279	Mustela_putorius_furo
ENSCAFG00000012385	BLM	100	80.183	ENSMLUG00000014697	BLM	100	80.675	Myotis_lucifugus
ENSCAFG00000012385	BLM	100	77.684	ENSNGAG00000001275	Blm	100	77.542	Nannospalax_galili
ENSCAFG00000012385	BLM	84	64.841	ENSNBRG00000019702	blm	61	64.512	Neolamprologus_brichardi
ENSCAFG00000012385	BLM	100	81.171	ENSNLEG00000012087	BLM	100	82.967	Nomascus_leucogenys
ENSCAFG00000012385	BLM	99	61.356	ENSMEUG00000007253	BLM	99	61.662	Notamacropus_eugenii
ENSCAFG00000012385	BLM	95	86.878	ENSOPRG00000011667	BLM	95	86.326	Ochotona_princeps
ENSCAFG00000012385	BLM	74	77.255	ENSODEG00000015373	BLM	100	77.255	Octodon_degus
ENSCAFG00000012385	BLM	87	60.349	ENSONIG00000015193	blm	59	61.275	Oreochromis_niloticus
ENSCAFG00000012385	BLM	54	83.095	ENSOANG00000009316	-	99	82.835	Ornithorhynchus_anatinus
ENSCAFG00000012385	BLM	99	74.207	ENSOCUG00000013969	BLM	99	74.207	Oryctolagus_cuniculus
ENSCAFG00000012385	BLM	85	65.522	ENSORLG00000008110	blm	85	65.311	Oryzias_latipes
ENSCAFG00000012385	BLM	66	65.645	ENSORLG00020004812	blm	67	64.654	Oryzias_latipes_hni
ENSCAFG00000012385	BLM	66	65.649	ENSORLG00015018640	blm	78	65.565	Oryzias_latipes_hsok
ENSCAFG00000012385	BLM	66	64.923	ENSOMEG00000023545	blm	66	64.803	Oryzias_melastigma
ENSCAFG00000012385	BLM	100	75.721	ENSOGAG00000005708	BLM	100	75.721	Otolemur_garnettii
ENSCAFG00000012385	BLM	100	82.600	ENSOARG00000012875	BLM	100	82.530	Ovis_aries
ENSCAFG00000012385	BLM	100	82.370	ENSPPAG00000032173	BLM	100	82.440	Pan_paniscus
ENSCAFG00000012385	BLM	100	86.088	ENSPPRG00000002471	BLM	100	86.228	Panthera_pardus
ENSCAFG00000012385	BLM	100	85.684	ENSPTIG00000016168	BLM	100	85.684	Panthera_tigris_altaica
ENSCAFG00000012385	BLM	100	82.087	ENSPTRG00000007460	BLM	100	82.158	Pan_troglodytes
ENSCAFG00000012385	BLM	100	82.428	ENSPANG00000018572	BLM	92	94.879	Papio_anubis
ENSCAFG00000012385	BLM	88	62.441	ENSPKIG00000008954	blm	76	62.632	Paramormyrops_kingsleyae
ENSCAFG00000012385	BLM	51	66.113	ENSPMGG00000006629	blm	82	64.525	Periophthalmus_magnuspinnatus
ENSCAFG00000012385	BLM	100	76.371	ENSPEMG00000017348	Blm	100	76.090	Peromyscus_maniculatus_bairdii
ENSCAFG00000012385	BLM	50	58.626	ENSPMAG00000000445	blm	95	58.964	Petromyzon_marinus
ENSCAFG00000012385	BLM	99	64.232	ENSPCIG00000006609	BLM	99	64.461	Phascolarctos_cinereus
ENSCAFG00000012385	BLM	60	65.228	ENSPFOG00000005059	blm	60	64.834	Poecilia_formosa
ENSCAFG00000012385	BLM	71	62.833	ENSPLAG00000017344	blm	72	63.094	Poecilia_latipinna
ENSCAFG00000012385	BLM	58	62.607	ENSPREG00000007715	blm	59	62.728	Poecilia_reticulata
ENSCAFG00000012385	BLM	100	80.889	ENSPPYG00000006784	BLM	100	80.889	Pongo_abelii
ENSCAFG00000012385	BLM	73	87.879	ENSPCAG00000008960	BLM	73	87.879	Procavia_capensis
ENSCAFG00000012385	BLM	100	75.828	ENSPCOG00000000439	BLM	100	77.844	Propithecus_coquereli
ENSCAFG00000012385	BLM	81	96.486	ENSPVAG00000011642	BLM	83	96.486	Pteropus_vampyrus
ENSCAFG00000012385	BLM	83	52.889	ENSPNYG00000010956	blm	84	53.418	Pundamilia_nyererei
ENSCAFG00000012385	BLM	59	63.799	ENSPNAG00000011714	blm	67	63.550	Pygocentrus_nattereri
ENSCAFG00000012385	BLM	100	73.502	ENSRNOG00000011213	Blm	100	73.643	Rattus_norvegicus
ENSCAFG00000012385	BLM	100	79.732	ENSRBIG00000029656	BLM	92	93.531	Rhinopithecus_bieti
ENSCAFG00000012385	BLM	100	81.453	ENSRROG00000037871	BLM	92	93.531	Rhinopithecus_roxellana
ENSCAFG00000012385	BLM	91	82.369	ENSSBOG00000030957	BLM	100	82.369	Saimiri_boliviensis_boliviensis
ENSCAFG00000012385	BLM	99	64.136	ENSSHAG00000007988	BLM	99	64.181	Sarcophilus_harrisii
ENSCAFG00000012385	BLM	55	64.841	ENSSFOG00015015462	blm	63	64.594	Scleropages_formosus
ENSCAFG00000012385	BLM	85	56.250	ENSSMAG00000001120	blm	86	56.250	Scophthalmus_maximus
ENSCAFG00000012385	BLM	55	64.885	ENSSDUG00000010955	blm	56	65.184	Seriola_dumerili
ENSCAFG00000012385	BLM	55	64.758	ENSSLDG00000000634	blm	59	62.012	Seriola_lalandi_dorsalis
ENSCAFG00000012385	BLM	91	76.481	ENSSARG00000006398	BLM	96	76.481	Sorex_araneus
ENSCAFG00000012385	BLM	75	57.998	ENSSPUG00000000013	BLM	99	54.795	Sphenodon_punctatus
ENSCAFG00000012385	BLM	65	64.766	ENSSPAG00000013999	blm	65	64.758	Stegastes_partitus
ENSCAFG00000012385	BLM	100	82.973	ENSSSCG00000001816	BLM	99	83.200	Sus_scrofa
ENSCAFG00000012385	BLM	80	52.577	ENSTGUG00000009959	-	99	52.271	Taeniopygia_guttata
ENSCAFG00000012385	BLM	66	63.005	ENSTRUG00000019860	blm	66	62.897	Takifugu_rubripes
ENSCAFG00000012385	BLM	84	64.322	ENSTNIG00000019246	blm	63	63.683	Tetraodon_nigroviridis
ENSCAFG00000012385	BLM	79	84.717	ENSTBEG00000006706	BLM	81	84.717	Tupaia_belangeri
ENSCAFG00000012385	BLM	100	84.697	ENSTTRG00000016386	BLM	100	84.626	Tursiops_truncatus
ENSCAFG00000012385	BLM	100	90.049	ENSUMAG00000009105	BLM	100	96.311	Ursus_maritimus
ENSCAFG00000012385	BLM	99	81.325	ENSVPAG00000000085	BLM	99	81.818	Vicugna_pacos
ENSCAFG00000012385	BLM	100	98.873	ENSVVUG00000006402	BLM	100	99.313	Vulpes_vulpes
ENSCAFG00000012385	BLM	99	51.576	ENSXETG00000007847	blm	74	35.238	Xenopus_tropicalis
ENSCAFG00000012385	BLM	83	61.047	ENSXCOG00000020227	blm	84	61.047	Xiphophorus_couchianus