EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000012856 (Gene tree)
Gene ID: 102156089
Gene Symbol: TDRKH
Alias: -
Full Name: tudor and KH domain containing
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 24505 bases
Position: chr17:60783375-60807879
Accession: 47227
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000018935	KH_1	PF00013.29	1.5e-33	1	2
ENSCAFP00000018935	KH_1	PF00013.29	1.5e-33	2	2
ENSCAFP00000039153	KH_1	PF00013.29	1.8e-33	1	2
ENSCAFP00000039153	KH_1	PF00013.29	1.8e-33	2	2
ENSCAFP00000018935	TUDOR	PF00567.24	5e-29	1	1
ENSCAFP00000039153	TUDOR	PF00567.24	5.5e-29	1	1
ENSCAFP00000018884	Ribosomal_L9_N	PF01281.19	3.3e-16	1	1
ENSCAFP00000039153	Ribosomal_L9_N	PF01281.19	5.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000020405	-	1689	XM_005630819	ENSCAFP00000018935	563 (aa)	XP_005630876	E2RBJ9
ENSCAFT00000020352	-	702	-	ENSCAFP00000018884	233 (aa)	-	F1PJ57
ENSCAFT00000048274	-	1962	-	ENSCAFP00000039153	605 (aa)	-	J9P0T0

Gene Model

Click here to download ENSCAFG00000012856's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03010	Ribosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000012856's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000012856	TDRKH	100	91.312	ENSG00000182134	TDRKH	100	99.237	Homo_sapiens
ENSCAFG00000012856	TDRKH	100	94.149	ENSAMEG00000000421	TDRKH	100	94.858	Ailuropoda_melanoleuca
ENSCAFG00000012856	TDRKH	85	57.143	ENSACAG00000007457	TDRKH	95	57.143	Anolis_carolinensis
ENSCAFG00000012856	TDRKH	100	90.780	ENSANAG00000021663	TDRKH	100	90.780	Aotus_nancymaae
ENSCAFG00000012856	TDRKH	100	92.553	ENSBTAG00000021594	TDRKH	100	92.553	Bos_taurus
ENSCAFG00000012856	TDRKH	100	90.426	ENSCJAG00000007955	TDRKH	100	90.426	Callithrix_jacchus
ENSCAFG00000012856	TDRKH	100	100.000	ENSCAFG00020009606	TDRKH	100	100.000	Canis_lupus_dingo
ENSCAFG00000012856	TDRKH	100	91.489	ENSCHIG00000025326	TDRKH	100	91.489	Capra_hircus
ENSCAFG00000012856	TDRKH	100	89.362	ENSTSYG00000010405	TDRKH	100	89.362	Carlito_syrichta
ENSCAFG00000012856	TDRKH	92	87.814	ENSCAPG00000007565	TDRKH	97	87.814	Cavia_aperea
ENSCAFG00000012856	TDRKH	100	90.426	ENSCPOG00000003556	TDRKH	100	90.426	Cavia_porcellus
ENSCAFG00000012856	TDRKH	100	90.603	ENSCCAG00000033931	TDRKH	100	90.603	Cebus_capucinus
ENSCAFG00000012856	TDRKH	100	90.957	ENSCATG00000041878	TDRKH	100	90.957	Cercocebus_atys
ENSCAFG00000012856	TDRKH	100	88.475	ENSCLAG00000001088	TDRKH	100	88.475	Chinchilla_lanigera
ENSCAFG00000012856	TDRKH	100	91.135	ENSCSAG00000001820	TDRKH	100	91.135	Chlorocebus_sabaeus
ENSCAFG00000012856	TDRKH	89	88.263	ENSCHOG00000000264	TDRKH	88	88.263	Choloepus_hoffmanni
ENSCAFG00000012856	TDRKH	97	62.996	ENSCPBG00000008824	TDRKH	90	63.604	Chrysemys_picta_bellii
ENSCAFG00000012856	TDRKH	100	90.426	ENSCANG00000037367	TDRKH	100	90.426	Colobus_angolensis_palliatus
ENSCAFG00000012856	TDRKH	51	62.238	ENSCGRG00001010793	-	90	62.238	Cricetulus_griseus_chok1gshd
ENSCAFG00000012856	TDRKH	99	88.710	ENSCGRG00001006583	-	99	88.710	Cricetulus_griseus_chok1gshd
ENSCAFG00000012856	TDRKH	96	64.088	ENSCGRG00001011699	-	99	64.088	Cricetulus_griseus_chok1gshd
ENSCAFG00000012856	TDRKH	96	63.904	ENSCGRG00000013230	-	99	63.904	Cricetulus_griseus_crigri
ENSCAFG00000012856	TDRKH	51	61.888	ENSCGRG00000012138	-	90	61.888	Cricetulus_griseus_crigri
ENSCAFG00000012856	TDRKH	99	88.710	ENSCGRG00000012937	-	99	88.710	Cricetulus_griseus_crigri
ENSCAFG00000012856	TDRKH	92	89.017	ENSDNOG00000035650	TDRKH	100	89.017	Dasypus_novemcinctus
ENSCAFG00000012856	TDRKH	100	90.780	ENSDORG00000015322	Tdrkh	100	90.780	Dipodomys_ordii
ENSCAFG00000012856	TDRKH	100	82.540	ENSETEG00000008020	TDRKH	100	82.540	Echinops_telfairi
ENSCAFG00000012856	TDRKH	87	36.699	ENSEBUG00000010481	TDRKH	83	36.576	Eptatretus_burgeri
ENSCAFG00000012856	TDRKH	100	92.376	ENSEASG00005005213	TDRKH	100	92.376	Equus_asinus_asinus
ENSCAFG00000012856	TDRKH	100	92.553	ENSECAG00000013096	TDRKH	100	92.553	Equus_caballus
ENSCAFG00000012856	TDRKH	72	95.714	ENSEEUG00000015952	TDRKH	72	95.714	Erinaceus_europaeus
ENSCAFG00000012856	TDRKH	100	95.204	ENSFCAG00000010980	TDRKH	100	95.204	Felis_catus
ENSCAFG00000012856	TDRKH	100	88.121	ENSFDAG00000015315	TDRKH	100	88.121	Fukomys_damarensis
ENSCAFG00000012856	TDRKH	97	55.415	ENSGALG00000031812	TDRKH	96	55.415	Gallus_gallus
ENSCAFG00000012856	TDRKH	99	63.158	ENSGAGG00000005447	TDRKH	100	63.684	Gopherus_agassizii
ENSCAFG00000012856	TDRKH	100	91.667	ENSGGOG00000025419	TDRKH	100	91.667	Gorilla_gorilla
ENSCAFG00000012856	TDRKH	100	88.121	ENSHGLG00000007478	TDRKH	100	88.121	Heterocephalus_glaber_female
ENSCAFG00000012856	TDRKH	100	88.121	ENSHGLG00100007927	TDRKH	100	88.121	Heterocephalus_glaber_male
ENSCAFG00000012856	TDRKH	100	92.553	ENSSTOG00000006506	TDRKH	100	92.553	Ictidomys_tridecemlineatus
ENSCAFG00000012856	TDRKH	100	88.869	ENSJJAG00000000323	Tdrkh	100	88.869	Jaculus_jaculus
ENSCAFG00000012856	TDRKH	71	55.448	ENSLACG00000017639	TDRKH	98	55.448	Latimeria_chalumnae
ENSCAFG00000012856	TDRKH	99	87.633	ENSLAFG00000006274	TDRKH	100	87.633	Loxodonta_africana
ENSCAFG00000012856	TDRKH	100	91.135	ENSMFAG00000041641	TDRKH	100	91.135	Macaca_fascicularis
ENSCAFG00000012856	TDRKH	98	90.614	ENSMMUG00000009096	TDRKH	98	92.308	Macaca_mulatta
ENSCAFG00000012856	TDRKH	100	91.135	ENSMNEG00000021524	TDRKH	100	91.135	Macaca_nemestrina
ENSCAFG00000012856	TDRKH	100	91.135	ENSMLEG00000033882	TDRKH	100	91.135	Mandrillus_leucophaeus
ENSCAFG00000012856	TDRKH	99	87.722	ENSMAUG00000019159	Tdrkh	100	87.722	Mesocricetus_auratus
ENSCAFG00000012856	TDRKH	100	72.518	ENSMICG00000042330	-	100	72.518	Microcebus_murinus
ENSCAFG00000012856	TDRKH	100	91.489	ENSMICG00000010682	-	100	91.489	Microcebus_murinus
ENSCAFG00000012856	TDRKH	99	63.055	ENSMOCG00000014074	-	99	63.055	Microtus_ochrogaster
ENSCAFG00000012856	TDRKH	100	81.206	ENSMOCG00000002113	-	98	82.364	Microtus_ochrogaster
ENSCAFG00000012856	TDRKH	99	81.643	ENSMODG00000018906	TDRKH	96	81.643	Monodelphis_domestica
ENSCAFG00000012856	TDRKH	99	90.764	MGP_CAROLIEiJ_G0025310	Tdrkh	100	90.764	Mus_caroli
ENSCAFG00000012856	TDRKH	99	90.941	ENSMUSG00000041912	Tdrkh	100	90.941	Mus_musculus
ENSCAFG00000012856	TDRKH	99	90.409	MGP_PahariEiJ_G0026753	Tdrkh	100	90.409	Mus_pahari
ENSCAFG00000012856	TDRKH	99	90.764	MGP_SPRETEiJ_G0026252	Tdrkh	100	90.764	Mus_spretus
ENSCAFG00000012856	TDRKH	96	95.547	ENSMPUG00000003558	TDRKH	100	95.204	Mustela_putorius_furo
ENSCAFG00000012856	TDRKH	100	90.603	ENSMLUG00000002213	TDRKH	100	90.603	Myotis_lucifugus
ENSCAFG00000012856	TDRKH	99	90.231	ENSNGAG00000017825	Tdrkh	100	90.231	Nannospalax_galili
ENSCAFG00000012856	TDRKH	100	90.780	ENSNLEG00000010284	TDRKH	100	90.780	Nomascus_leucogenys
ENSCAFG00000012856	TDRKH	88	92.208	ENSMEUG00000006144	TDRKH	89	92.208	Notamacropus_eugenii
ENSCAFG00000012856	TDRKH	81	88.889	ENSOPRG00000016049	TDRKH	81	88.889	Ochotona_princeps
ENSCAFG00000012856	TDRKH	100	87.943	ENSODEG00000009532	-	100	87.943	Octodon_degus
ENSCAFG00000012856	TDRKH	100	86.348	ENSODEG00000001075	-	100	86.348	Octodon_degus
ENSCAFG00000012856	TDRKH	82	44.490	ENSOANG00000001094	-	99	44.490	Ornithorhynchus_anatinus
ENSCAFG00000012856	TDRKH	100	77.305	ENSOCUG00000001387	TDRKH	100	77.305	Oryctolagus_cuniculus
ENSCAFG00000012856	TDRKH	100	81.217	ENSOGAG00000001839	-	99	81.469	Otolemur_garnettii
ENSCAFG00000012856	TDRKH	100	74.205	ENSOGAG00000032601	-	100	74.205	Otolemur_garnettii
ENSCAFG00000012856	TDRKH	52	74.061	ENSOGAG00000030085	-	97	72.355	Otolemur_garnettii
ENSCAFG00000012856	TDRKH	100	91.489	ENSOARG00000021052	TDRKH	100	91.489	Ovis_aries
ENSCAFG00000012856	TDRKH	100	91.667	ENSPPAG00000028994	TDRKH	100	91.667	Pan_paniscus
ENSCAFG00000012856	TDRKH	100	95.737	ENSPPRG00000001585	TDRKH	100	95.737	Panthera_pardus
ENSCAFG00000012856	TDRKH	100	95.737	ENSPTIG00000019916	TDRKH	100	95.737	Panthera_tigris_altaica
ENSCAFG00000012856	TDRKH	100	91.667	ENSPTRG00000001297	TDRKH	100	91.667	Pan_troglodytes
ENSCAFG00000012856	TDRKH	100	91.135	ENSPANG00000001986	TDRKH	100	91.135	Papio_anubis
ENSCAFG00000012856	TDRKH	93	63.346	ENSPSIG00000008541	TDRKH	99	63.346	Pelodiscus_sinensis
ENSCAFG00000012856	TDRKH	99	90.764	ENSPEMG00000011171	Tdrkh	100	90.764	Peromyscus_maniculatus_bairdii
ENSCAFG00000012856	TDRKH	99	81.818	ENSPCIG00000021201	TDRKH	99	81.818	Phascolarctos_cinereus
ENSCAFG00000012856	TDRKH	100	91.667	ENSPPYG00000000855	TDRKH	100	91.667	Pongo_abelii
ENSCAFG00000012856	TDRKH	100	89.362	ENSPCOG00000027505	TDRKH	100	89.362	Propithecus_coquereli
ENSCAFG00000012856	TDRKH	100	87.943	ENSPVAG00000005234	TDRKH	100	87.943	Pteropus_vampyrus
ENSCAFG00000012856	TDRKH	99	91.652	ENSRNOG00000020860	Tdrkh	100	91.652	Rattus_norvegicus
ENSCAFG00000012856	TDRKH	100	90.957	ENSRBIG00000044860	TDRKH	100	90.957	Rhinopithecus_bieti
ENSCAFG00000012856	TDRKH	100	90.957	ENSRROG00000036923	TDRKH	100	90.957	Rhinopithecus_roxellana
ENSCAFG00000012856	TDRKH	100	72.340	ENSSBOG00000034454	TDRKH	93	80.665	Saimiri_boliviensis_boliviensis
ENSCAFG00000012856	TDRKH	99	82.517	ENSSHAG00000015859	TDRKH	88	82.517	Sarcophilus_harrisii
ENSCAFG00000012856	TDRKH	99	79.574	ENSSARG00000008525	TDRKH	100	79.574	Sorex_araneus
ENSCAFG00000012856	TDRKH	89	62.282	ENSSPUG00000002369	TDRKH	93	62.863	Sphenodon_punctatus
ENSCAFG00000012856	TDRKH	99	90.909	ENSSSCG00000027770	TDRKH	100	90.909	Sus_scrofa
ENSCAFG00000012856	TDRKH	100	90.071	ENSTBEG00000011201	TDRKH	100	90.071	Tupaia_belangeri
ENSCAFG00000012856	TDRKH	100	83.688	ENSTTRG00000003149	TDRKH	100	83.688	Tursiops_truncatus
ENSCAFG00000012856	TDRKH	100	94.494	ENSUAMG00000019589	TDRKH	100	94.494	Ursus_americanus
ENSCAFG00000012856	TDRKH	100	94.671	ENSUMAG00000001456	TDRKH	100	94.671	Ursus_maritimus
ENSCAFG00000012856	TDRKH	100	92.730	ENSVPAG00000000666	TDRKH	100	92.730	Vicugna_pacos
ENSCAFG00000012856	TDRKH	100	98.757	ENSVVUG00000013241	TDRKH	100	98.757	Vulpes_vulpes
ENSCAFG00000012856	TDRKH	93	39.783	ENSXETG00000019909	tdrkh	91	40.713	Xenopus_tropicalis