EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000013087 (Gene tree)
Gene ID: 486365
Gene Symbol: PATZ1
Alias: -
Full Name: POZ/BTB and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 17374 bases
Position: chr26:24278802-24296175
Accession: 44274
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000019277	zf-C2H2	PF00096.26	1.9e-26	1	5
ENSCAFP00000019277	zf-C2H2	PF00096.26	1.9e-26	2	5
ENSCAFP00000019277	zf-C2H2	PF00096.26	1.9e-26	3	5
ENSCAFP00000019277	zf-C2H2	PF00096.26	1.9e-26	4	5
ENSCAFP00000019277	zf-C2H2	PF00096.26	1.9e-26	5	5
ENSCAFP00000019281	zf-C2H2	PF00096.26	4.1e-20	1	4
ENSCAFP00000019281	zf-C2H2	PF00096.26	4.1e-20	2	4
ENSCAFP00000019281	zf-C2H2	PF00096.26	4.1e-20	3	4
ENSCAFP00000019281	zf-C2H2	PF00096.26	4.1e-20	4	4
ENSCAFP00000019277	zf-met	PF12874.7	1.8e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000020768	-	1947	XM_861146	ENSCAFP00000019281	648 (aa)	XP_866239	F1P9P3
ENSCAFT00000020764	-	2061	XM_003433403	ENSCAFP00000019277	687 (aa)	XP_003433451	E2RJC1

Gene Model

Click here to download ENSCAFG00000013087's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000013087's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000013087	PATZ1	69	37.079	ENSCAFG00000030889	ZBTB47	52	31.481
ENSCAFG00000013087	PATZ1	54	31.071	ENSCAFG00000029649	-	97	34.337
ENSCAFG00000013087	PATZ1	56	32.766	ENSCAFG00000028550	-	85	33.200
ENSCAFG00000013087	PATZ1	68	32.692	ENSCAFG00000018578	ZNF131	92	32.692
ENSCAFG00000013087	PATZ1	63	44.086	ENSCAFG00000015968	BCL6B	58	44.086
ENSCAFG00000013087	PATZ1	53	32.941	ENSCAFG00000020085	ZFP1	60	30.638
ENSCAFG00000013087	PATZ1	76	35.417	ENSCAFG00000015688	ZBTB49	50	31.156
ENSCAFG00000013087	PATZ1	53	30.479	ENSCAFG00000032330	-	92	30.579
ENSCAFG00000013087	PATZ1	51	30.976	ENSCAFG00000015170	ZNF81	58	32.941
ENSCAFG00000013087	PATZ1	53	32.948	ENSCAFG00000018071	ZNF317	64	32.948
ENSCAFG00000013087	PATZ1	87	32.618	ENSCAFG00000014700	MYNN	86	36.145
ENSCAFG00000013087	PATZ1	52	37.037	ENSCAFG00000000017	ZNF236	65	37.037
ENSCAFG00000013087	PATZ1	53	30.741	ENSCAFG00000029288	-	72	38.333
ENSCAFG00000013087	PATZ1	53	34.118	ENSCAFG00000030057	ZNF234	82	32.283
ENSCAFG00000013087	PATZ1	53	34.914	ENSCAFG00000029028	ZNF226	73	36.994
ENSCAFG00000013087	PATZ1	50	30.612	ENSCAFG00000008559	ZNF319	79	35.345
ENSCAFG00000013087	PATZ1	56	30.258	ENSCAFG00000004179	PRDM5	75	30.403
ENSCAFG00000013087	PATZ1	73	36.232	ENSCAFG00000018554	ZBTB14	57	38.889
ENSCAFG00000013087	PATZ1	55	39.286	ENSCAFG00000002561	-	98	39.286
ENSCAFG00000013087	PATZ1	53	31.769	ENSCAFG00000029340	-	94	33.333
ENSCAFG00000013087	PATZ1	55	31.527	ENSCAFG00000031471	-	84	31.527

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000013087	PATZ1	100	99.272	ENSG00000100105	PATZ1	100	99.376	Homo_sapiens
ENSCAFG00000013087	PATZ1	98	59.847	ENSAPOG00000018447	patz1	100	57.331	Acanthochromis_polyacanthus
ENSCAFG00000013087	PATZ1	100	99.854	ENSAMEG00000007074	PATZ1	100	99.854	Ailuropoda_melanoleuca
ENSCAFG00000013087	PATZ1	99	60.232	ENSACIG00000016779	patz1	100	59.961	Amphilophus_citrinellus
ENSCAFG00000013087	PATZ1	100	57.563	ENSAPEG00000013354	patz1	100	57.703	Amphiprion_percula
ENSCAFG00000013087	PATZ1	99	62.353	ENSATEG00000011260	patz1	100	62.157	Anabas_testudineus
ENSCAFG00000013087	PATZ1	85	91.952	ENSAPLG00000003934	PATZ1	99	90.925	Anas_platyrhynchos
ENSCAFG00000013087	PATZ1	100	99.272	ENSANAG00000029603	PATZ1	100	99.376	Aotus_nancymaae
ENSCAFG00000013087	PATZ1	97	62.524	ENSAMXG00000002273	patz1	98	62.147	Astyanax_mexicanus
ENSCAFG00000013087	PATZ1	100	99.854	ENSBTAG00000005478	PATZ1	100	99.854	Bos_taurus
ENSCAFG00000013087	PATZ1	100	99.272	ENSCJAG00000010978	PATZ1	100	99.376	Callithrix_jacchus
ENSCAFG00000013087	PATZ1	100	99.418	ENSCHIG00000020203	PATZ1	100	99.418	Capra_hircus
ENSCAFG00000013087	PATZ1	100	99.272	ENSTSYG00000033183	PATZ1	100	99.272	Carlito_syrichta
ENSCAFG00000013087	PATZ1	100	99.272	ENSCCAG00000028772	PATZ1	100	99.376	Cebus_capucinus
ENSCAFG00000013087	PATZ1	100	99.272	ENSCATG00000006101	PATZ1	100	99.376	Cercocebus_atys
ENSCAFG00000013087	PATZ1	100	89.275	ENSCPBG00000011277	PATZ1	100	88.261	Chrysemys_picta_bellii
ENSCAFG00000013087	PATZ1	100	99.272	ENSCANG00000024972	PATZ1	100	99.376	Colobus_angolensis_palliatus
ENSCAFG00000013087	PATZ1	100	97.089	ENSCGRG00001004071	Patz1	100	97.089	Cricetulus_griseus_chok1gshd
ENSCAFG00000013087	PATZ1	93	97.823	ENSCGRG00000004814	Patz1	100	97.823	Cricetulus_griseus_crigri
ENSCAFG00000013087	PATZ1	100	54.965	ENSCSEG00000001385	patz1	100	55.000	Cynoglossus_semilaevis
ENSCAFG00000013087	PATZ1	100	58.509	ENSCVAG00000007684	patz1	100	58.789	Cyprinodon_variegatus
ENSCAFG00000013087	PATZ1	96	60.679	ENSDARG00000076584	patz1	98	58.967	Danio_rerio
ENSCAFG00000013087	PATZ1	90	99.354	ENSDNOG00000003183	PATZ1	100	99.354	Dasypus_novemcinctus
ENSCAFG00000013087	PATZ1	100	99.709	ENSDORG00000023834	Patz1	100	99.709	Dipodomys_ordii
ENSCAFG00000013087	PATZ1	100	99.563	ENSECAG00000025030	PATZ1	100	99.563	Equus_caballus
ENSCAFG00000013087	PATZ1	100	60.481	ENSELUG00000002333	patz1	100	60.139	Esox_lucius
ENSCAFG00000013087	PATZ1	100	100.000	ENSFCAG00000030253	PATZ1	100	100.000	Felis_catus
ENSCAFG00000013087	PATZ1	86	92.034	ENSFALG00000007450	PATZ1	99	91.141	Ficedula_albicollis
ENSCAFG00000013087	PATZ1	96	95.023	ENSFDAG00000005614	PATZ1	100	92.760	Fukomys_damarensis
ENSCAFG00000013087	PATZ1	100	57.003	ENSFHEG00000014755	patz1	100	57.625	Fundulus_heteroclitus
ENSCAFG00000013087	PATZ1	98	55.230	ENSGMOG00000001062	patz1	98	54.848	Gadus_morhua
ENSCAFG00000013087	PATZ1	100	88.921	ENSGALG00000006934	PATZ1	100	88.201	Gallus_gallus
ENSCAFG00000013087	PATZ1	99	58.721	ENSGAFG00000010053	patz1	100	57.856	Gambusia_affinis
ENSCAFG00000013087	PATZ1	85	92.110	ENSGAGG00000003214	PATZ1	100	91.081	Gopherus_agassizii
ENSCAFG00000013087	PATZ1	100	99.418	ENSGGOG00000017171	PATZ1	100	99.532	Gorilla_gorilla
ENSCAFG00000013087	PATZ1	97	62.846	ENSHCOG00000017644	patz1	93	57.879	Hippocampus_comes
ENSCAFG00000013087	PATZ1	96	60.285	ENSIPUG00000017653	patz1	97	59.756	Ictalurus_punctatus
ENSCAFG00000013087	PATZ1	100	99.563	ENSSTOG00000020707	PATZ1	100	99.688	Ictidomys_tridecemlineatus
ENSCAFG00000013087	PATZ1	100	96.952	ENSJJAG00000015259	Patz1	100	96.952	Jaculus_jaculus
ENSCAFG00000013087	PATZ1	100	57.528	ENSKMAG00000008157	patz1	100	57.486	Kryptolebias_marmoratus
ENSCAFG00000013087	PATZ1	100	98.981	ENSLAFG00000002317	PATZ1	100	98.981	Loxodonta_africana
ENSCAFG00000013087	PATZ1	100	99.127	ENSMFAG00000040968	PATZ1	100	99.220	Macaca_fascicularis
ENSCAFG00000013087	PATZ1	100	99.127	ENSMNEG00000037588	PATZ1	100	99.220	Macaca_nemestrina
ENSCAFG00000013087	PATZ1	100	99.272	ENSMLEG00000030938	PATZ1	100	99.376	Mandrillus_leucophaeus
ENSCAFG00000013087	PATZ1	100	56.735	ENSMAMG00000023652	patz1	100	57.625	Mastacembelus_armatus
ENSCAFG00000013087	PATZ1	85	88.205	ENSMGAG00000008439	PATZ1	100	87.179	Meleagris_gallopavo
ENSCAFG00000013087	PATZ1	100	98.836	ENSMAUG00000004129	Patz1	100	98.908	Mesocricetus_auratus
ENSCAFG00000013087	PATZ1	100	99.272	ENSMICG00000005430	PATZ1	100	99.272	Microcebus_murinus
ENSCAFG00000013087	PATZ1	100	98.690	ENSMOCG00000014488	Patz1	100	98.752	Microtus_ochrogaster
ENSCAFG00000013087	PATZ1	98	55.078	ENSMMOG00000021679	patz1	100	54.513	Mola_mola
ENSCAFG00000013087	PATZ1	100	57.143	ENSMALG00000021172	patz1	100	56.719	Monopterus_albus
ENSCAFG00000013087	PATZ1	100	98.690	MGP_CAROLIEiJ_G0016007	Patz1	100	98.752	Mus_caroli
ENSCAFG00000013087	PATZ1	100	98.836	ENSMUSG00000020453	Patz1	100	98.908	Mus_musculus
ENSCAFG00000013087	PATZ1	100	98.836	MGP_PahariEiJ_G0016884	Patz1	100	98.908	Mus_pahari
ENSCAFG00000013087	PATZ1	100	98.836	MGP_SPRETEiJ_G0016846	Patz1	100	98.908	Mus_spretus
ENSCAFG00000013087	PATZ1	100	99.709	ENSMLUG00000009942	PATZ1	100	99.709	Myotis_lucifugus
ENSCAFG00000013087	PATZ1	100	99.127	ENSNGAG00000010268	Patz1	100	99.220	Nannospalax_galili
ENSCAFG00000013087	PATZ1	99	60.039	ENSNBRG00000016032	patz1	100	59.768	Neolamprologus_brichardi
ENSCAFG00000013087	PATZ1	68	94.194	ENSMEUG00000016293	PATZ1	99	94.181	Notamacropus_eugenii
ENSCAFG00000013087	PATZ1	100	98.836	ENSODEG00000003589	PATZ1	100	98.836	Octodon_degus
ENSCAFG00000013087	PATZ1	99	58.772	ENSONIG00000004248	patz1	100	58.565	Oreochromis_niloticus
ENSCAFG00000013087	PATZ1	100	93.614	ENSOANG00000014654	PATZ1	100	93.904	Ornithorhynchus_anatinus
ENSCAFG00000013087	PATZ1	99	58.626	ENSORLG00020010937	patz1	100	58.473	Oryzias_latipes_hni
ENSCAFG00000013087	PATZ1	99	58.003	ENSORLG00015007396	patz1	100	57.856	Oryzias_latipes_hsok
ENSCAFG00000013087	PATZ1	99	57.312	ENSOMEG00000006636	patz1	100	57.312	Oryzias_melastigma
ENSCAFG00000013087	PATZ1	100	99.418	ENSOGAG00000027905	PATZ1	100	99.418	Otolemur_garnettii
ENSCAFG00000013087	PATZ1	100	99.418	ENSPPAG00000033227	PATZ1	100	99.532	Pan_paniscus
ENSCAFG00000013087	PATZ1	100	100.000	ENSPPRG00000001573	PATZ1	100	100.000	Panthera_pardus
ENSCAFG00000013087	PATZ1	86	100.000	ENSPTIG00000007937	PATZ1	91	100.000	Panthera_tigris_altaica
ENSCAFG00000013087	PATZ1	100	99.418	ENSPTRG00000014268	PATZ1	100	99.532	Pan_troglodytes
ENSCAFG00000013087	PATZ1	100	99.272	ENSPANG00000006821	PATZ1	100	99.272	Papio_anubis
ENSCAFG00000013087	PATZ1	100	61.938	ENSPKIG00000019584	patz1	100	61.754	Paramormyrops_kingsleyae
ENSCAFG00000013087	PATZ1	60	83.535	ENSPSIG00000016553	-	91	82.809	Pelodiscus_sinensis
ENSCAFG00000013087	PATZ1	58	95.960	ENSPSIG00000011562	-	100	96.286	Pelodiscus_sinensis
ENSCAFG00000013087	PATZ1	100	56.882	ENSPMGG00000010196	patz1	100	56.882	Periophthalmus_magnuspinnatus
ENSCAFG00000013087	PATZ1	100	98.690	ENSPEMG00000005321	Patz1	100	98.908	Peromyscus_maniculatus_bairdii
ENSCAFG00000013087	PATZ1	99	57.478	ENSPLAG00000010425	patz1	100	57.625	Poecilia_latipinna
ENSCAFG00000013087	PATZ1	99	57.562	ENSPMEG00000000255	patz1	100	57.709	Poecilia_mexicana
ENSCAFG00000013087	PATZ1	100	56.906	ENSPREG00000002440	patz1	100	57.044	Poecilia_reticulata
ENSCAFG00000013087	PATZ1	100	99.127	ENSPPYG00000011732	PATZ1	100	99.127	Pongo_abelii
ENSCAFG00000013087	PATZ1	100	99.127	ENSPCOG00000019729	PATZ1	100	99.127	Propithecus_coquereli
ENSCAFG00000013087	PATZ1	100	99.854	ENSPVAG00000001749	PATZ1	100	99.854	Pteropus_vampyrus
ENSCAFG00000013087	PATZ1	100	59.244	ENSPNYG00000013542	patz1	100	59.046	Pundamilia_nyererei
ENSCAFG00000013087	PATZ1	84	60.292	ENSPNAG00000017222	patz1	99	58.599	Pygocentrus_nattereri
ENSCAFG00000013087	PATZ1	100	99.272	ENSRBIG00000044231	PATZ1	100	99.376	Rhinopithecus_bieti
ENSCAFG00000013087	PATZ1	100	99.272	ENSRROG00000037155	PATZ1	100	99.376	Rhinopithecus_roxellana
ENSCAFG00000013087	PATZ1	100	99.272	ENSSBOG00000003894	PATZ1	100	99.376	Saimiri_boliviensis_boliviensis
ENSCAFG00000013087	PATZ1	79	88.462	ENSSFOG00015013244	patz1	78	88.462	Scleropages_formosus
ENSCAFG00000013087	PATZ1	100	87.055	ENSSPUG00000015298	PATZ1	100	86.202	Sphenodon_punctatus
ENSCAFG00000013087	PATZ1	85	99.485	ENSSSCG00000010027	PATZ1	100	99.485	Sus_scrofa
ENSCAFG00000013087	PATZ1	100	58.069	ENSTRUG00000015366	patz1	100	59.417	Takifugu_rubripes
ENSCAFG00000013087	PATZ1	100	99.854	ENSTTRG00000010279	PATZ1	100	99.854	Tursiops_truncatus
ENSCAFG00000013087	PATZ1	99	100.000	ENSUAMG00000015014	PATZ1	100	100.000	Ursus_americanus
ENSCAFG00000013087	PATZ1	100	73.188	ENSXETG00000004190	patz1	100	72.464	Xenopus_tropicalis
ENSCAFG00000013087	PATZ1	99	57.856	ENSXMAG00000015531	patz1	100	58.003	Xiphophorus_maculatus