EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000013165 (Gene tree)
Gene ID: 477289
Gene Symbol: PRPF6
Alias: -
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 41895 bases
Position: chr24:47442630-47484524
Accession: 45029
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000019418	PRP1_N	PF06424.12	1.4e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000020914	-	4119	XM_534481	ENSCAFP00000019418	941 (aa)	XP_534481	E2RPW8

Gene Model

Click here to download ENSCAFG00000013165's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000013165's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000013165	PRPF6	100	97.662	ENSG00000101161	PRPF6	100	97.662	Homo_sapiens
ENSCAFG00000013165	PRPF6	100	92.667	ENSAPOG00000010395	prpf6	96	93.092	Acanthochromis_polyacanthus
ENSCAFG00000013165	PRPF6	100	98.514	ENSAMEG00000001916	PRPF6	99	98.514	Ailuropoda_melanoleuca
ENSCAFG00000013165	PRPF6	100	92.667	ENSACIG00000019862	prpf6	96	93.092	Amphilophus_citrinellus
ENSCAFG00000013165	PRPF6	100	92.667	ENSAOCG00000012988	prpf6	96	93.092	Amphiprion_ocellaris
ENSCAFG00000013165	PRPF6	100	86.079	ENSAPEG00000008301	prpf6	100	86.504	Amphiprion_percula
ENSCAFG00000013165	PRPF6	100	92.349	ENSATEG00000005581	prpf6	96	92.774	Anabas_testudineus
ENSCAFG00000013165	PRPF6	100	98.087	ENSACAG00000006464	PRPF6	95	98.087	Anolis_carolinensis
ENSCAFG00000013165	PRPF6	100	97.768	ENSANAG00000012661	PRPF6	100	98.469	Aotus_nancymaae
ENSCAFG00000013165	PRPF6	100	92.349	ENSACLG00000025875	prpf6	96	92.774	Astatotilapia_calliptera
ENSCAFG00000013165	PRPF6	99	93.191	ENSAMXG00000001929	prpf6	96	93.617	Astyanax_mexicanus
ENSCAFG00000013165	PRPF6	100	99.150	ENSBTAG00000011656	PRPF6	100	99.150	Bos_taurus
ENSCAFG00000013165	PRPF6	100	97.768	ENSCJAG00000010616	PRPF6	100	97.768	Callithrix_jacchus
ENSCAFG00000013165	PRPF6	100	100.000	ENSCAFG00020002050	PRPF6	100	100.000	Canis_lupus_dingo
ENSCAFG00000013165	PRPF6	100	99.150	ENSCHIG00000018187	PRPF6	100	99.150	Capra_hircus
ENSCAFG00000013165	PRPF6	100	98.512	ENSTSYG00000007814	PRPF6	100	98.512	Carlito_syrichta
ENSCAFG00000013165	PRPF6	97	97.274	ENSCAPG00000015077	PRPF6	100	97.274	Cavia_aperea
ENSCAFG00000013165	PRPF6	100	98.618	ENSCPOG00000007518	PRPF6	100	98.618	Cavia_porcellus
ENSCAFG00000013165	PRPF6	100	94.474	ENSCCAG00000024564	PRPF6	100	94.580	Cebus_capucinus
ENSCAFG00000013165	PRPF6	100	97.768	ENSCATG00000037473	PRPF6	100	97.768	Cercocebus_atys
ENSCAFG00000013165	PRPF6	100	94.687	ENSCLAG00000003854	PRPF6	100	94.687	Chinchilla_lanigera
ENSCAFG00000013165	PRPF6	100	92.503	ENSCSAG00000016742	PRPF6	100	92.503	Chlorocebus_sabaeus
ENSCAFG00000013165	PRPF6	85	81.626	ENSCHOG00000003315	-	100	81.626	Choloepus_hoffmanni
ENSCAFG00000013165	PRPF6	100	98.087	ENSCPBG00000013964	PRPF6	96	98.087	Chrysemys_picta_bellii
ENSCAFG00000013165	PRPF6	99	73.784	ENSCING00000008817	-	99	73.784	Ciona_intestinalis
ENSCAFG00000013165	PRPF6	100	97.662	ENSCANG00000038230	PRPF6	100	97.662	Colobus_angolensis_palliatus
ENSCAFG00000013165	PRPF6	100	98.831	ENSCGRG00001022666	Prpf6	100	98.831	Cricetulus_griseus_chok1gshd
ENSCAFG00000013165	PRPF6	100	86.929	ENSCSEG00000018561	prpf6	100	87.354	Cynoglossus_semilaevis
ENSCAFG00000013165	PRPF6	100	92.667	ENSCVAG00000010550	prpf6	96	93.092	Cyprinodon_variegatus
ENSCAFG00000013165	PRPF6	100	92.667	ENSDARG00000091367	prpf6	99	93.092	Danio_rerio
ENSCAFG00000013165	PRPF6	100	97.875	ENSDNOG00000040544	PRPF6	100	97.875	Dasypus_novemcinctus
ENSCAFG00000013165	PRPF6	91	97.664	ENSDORG00000005406	Prpf6	100	97.664	Dipodomys_ordii
ENSCAFG00000013165	PRPF6	99	72.121	FBgn0036828	CG6841	98	72.115	Drosophila_melanogaster
ENSCAFG00000013165	PRPF6	85	95.760	ENSETEG00000004447	PRPF6	85	95.760	Echinops_telfairi
ENSCAFG00000013165	PRPF6	99	86.957	ENSEBUG00000008835	prpf6	99	86.957	Eptatretus_burgeri
ENSCAFG00000013165	PRPF6	100	99.150	ENSEASG00005023115	PRPF6	100	99.150	Equus_asinus_asinus
ENSCAFG00000013165	PRPF6	100	94.899	ENSECAG00000013983	PRPF6	100	94.899	Equus_caballus
ENSCAFG00000013165	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSCAFG00000013165	PRPF6	100	91.180	ENSELUG00000001945	prpf6	93	91.180	Esox_lucius
ENSCAFG00000013165	PRPF6	100	99.575	ENSFCAG00000001183	PRPF6	100	99.575	Felis_catus
ENSCAFG00000013165	PRPF6	100	97.981	ENSFALG00000010326	-	97	97.981	Ficedula_albicollis
ENSCAFG00000013165	PRPF6	100	90.329	ENSFALG00000006046	-	97	90.329	Ficedula_albicollis
ENSCAFG00000013165	PRPF6	100	97.131	ENSFDAG00000006451	PRPF6	100	98.526	Fukomys_damarensis
ENSCAFG00000013165	PRPF6	100	93.305	ENSFHEG00000000560	prpf6	96	93.305	Fundulus_heteroclitus
ENSCAFG00000013165	PRPF6	100	89.112	ENSGMOG00000015622	prpf6	99	89.112	Gadus_morhua
ENSCAFG00000013165	PRPF6	100	98.193	ENSGALG00000006001	PRPF6	100	98.193	Gallus_gallus
ENSCAFG00000013165	PRPF6	100	87.991	ENSGAFG00000021109	prpf6	96	88.417	Gambusia_affinis
ENSCAFG00000013165	PRPF6	100	91.180	ENSGACG00000002576	prpf6	99	91.180	Gasterosteus_aculeatus
ENSCAFG00000013165	PRPF6	100	97.981	ENSGAGG00000008653	PRPF6	96	97.981	Gopherus_agassizii
ENSCAFG00000013165	PRPF6	100	97.662	ENSGGOG00000016876	PRPF6	100	97.662	Gorilla_gorilla
ENSCAFG00000013165	PRPF6	100	92.349	ENSHBUG00000004496	prpf6	96	92.774	Haplochromis_burtoni
ENSCAFG00000013165	PRPF6	100	98.725	ENSHGLG00000009222	PRPF6	100	98.725	Heterocephalus_glaber_female
ENSCAFG00000013165	PRPF6	97	98.691	ENSHGLG00100016600	PRPF6	100	98.691	Heterocephalus_glaber_male
ENSCAFG00000013165	PRPF6	100	91.180	ENSHCOG00000011513	prpf6	96	91.605	Hippocampus_comes
ENSCAFG00000013165	PRPF6	100	93.624	ENSIPUG00000004912	prpf6	96	93.624	Ictalurus_punctatus
ENSCAFG00000013165	PRPF6	100	95.860	ENSSTOG00000002922	PRPF6	100	95.860	Ictidomys_tridecemlineatus
ENSCAFG00000013165	PRPF6	100	98.725	ENSJJAG00000000836	Prpf6	100	98.725	Jaculus_jaculus
ENSCAFG00000013165	PRPF6	100	92.455	ENSKMAG00000017800	prpf6	96	92.880	Kryptolebias_marmoratus
ENSCAFG00000013165	PRPF6	100	91.923	ENSLBEG00000012582	prpf6	96	91.923	Labrus_bergylta
ENSCAFG00000013165	PRPF6	100	94.687	ENSLOCG00000004827	prpf6	96	93.730	Lepisosteus_oculatus
ENSCAFG00000013165	PRPF6	100	97.662	ENSLAFG00000005272	PRPF6	100	97.662	Loxodonta_africana
ENSCAFG00000013165	PRPF6	100	97.662	ENSMFAG00000037542	PRPF6	100	97.662	Macaca_fascicularis
ENSCAFG00000013165	PRPF6	100	91.083	ENSMMUG00000015558	PRPF6	98	99.307	Macaca_mulatta
ENSCAFG00000013165	PRPF6	100	83.263	ENSMNEG00000045555	PRPF6	100	83.263	Macaca_nemestrina
ENSCAFG00000013165	PRPF6	100	92.455	ENSMAMG00000010718	prpf6	96	92.880	Mastacembelus_armatus
ENSCAFG00000013165	PRPF6	92	92.494	ENSMZEG00005026539	prpf6	98	92.494	Maylandia_zebra
ENSCAFG00000013165	PRPF6	100	92.038	ENSMZEG00005015261	-	99	92.463	Maylandia_zebra
ENSCAFG00000013165	PRPF6	97	97.928	ENSMGAG00000006634	PRPF6	100	97.928	Meleagris_gallopavo
ENSCAFG00000013165	PRPF6	100	98.725	ENSMAUG00000013969	Prpf6	100	98.725	Mesocricetus_auratus
ENSCAFG00000013165	PRPF6	87	98.297	ENSMICG00000017793	PRPF6	99	98.297	Microcebus_murinus
ENSCAFG00000013165	PRPF6	100	98.618	ENSMOCG00000001701	Prpf6	100	98.618	Microtus_ochrogaster
ENSCAFG00000013165	PRPF6	100	91.711	ENSMMOG00000020419	prpf6	100	92.136	Mola_mola
ENSCAFG00000013165	PRPF6	99	99.014	ENSMODG00000017051	PRPF6	99	99.014	Monodelphis_domestica
ENSCAFG00000013165	PRPF6	99	92.589	ENSMALG00000000089	prpf6	100	92.589	Monopterus_albus
ENSCAFG00000013165	PRPF6	100	92.136	MGP_CAROLIEiJ_G0024814	Prpf6	100	98.148	Mus_caroli
ENSCAFG00000013165	PRPF6	100	98.725	ENSMUSG00000002455	Prpf6	100	98.725	Mus_musculus
ENSCAFG00000013165	PRPF6	100	98.725	MGP_PahariEiJ_G0026262	Prpf6	100	98.725	Mus_pahari
ENSCAFG00000013165	PRPF6	100	98.725	MGP_SPRETEiJ_G0025741	Prpf6	100	98.725	Mus_spretus
ENSCAFG00000013165	PRPF6	91	98.689	ENSMPUG00000008673	PRPF6	99	98.689	Mustela_putorius_furo
ENSCAFG00000013165	PRPF6	100	98.725	ENSNGAG00000003365	Prpf6	100	98.725	Nannospalax_galili
ENSCAFG00000013165	PRPF6	100	92.455	ENSNBRG00000015025	prpf6	96	92.880	Neolamprologus_brichardi
ENSCAFG00000013165	PRPF6	100	97.768	ENSNLEG00000010208	PRPF6	100	97.768	Nomascus_leucogenys
ENSCAFG00000013165	PRPF6	100	88.554	ENSMEUG00000009824	-	90	88.735	Notamacropus_eugenii
ENSCAFG00000013165	PRPF6	100	92.667	ENSODEG00000004841	PRPF6	100	92.667	Octodon_degus
ENSCAFG00000013165	PRPF6	100	92.349	ENSONIG00000017406	prpf6	96	92.774	Oreochromis_niloticus
ENSCAFG00000013165	PRPF6	100	98.406	ENSOANG00000004920	PRPF6	100	98.406	Ornithorhynchus_anatinus
ENSCAFG00000013165	PRPF6	99	96.888	ENSOCUG00000014151	PRPF6	100	96.888	Oryctolagus_cuniculus
ENSCAFG00000013165	PRPF6	100	92.136	ENSORLG00000009592	prpf6	96	92.136	Oryzias_latipes
ENSCAFG00000013165	PRPF6	100	92.242	ENSORLG00020001458	prpf6	96	92.242	Oryzias_latipes_hni
ENSCAFG00000013165	PRPF6	100	92.242	ENSORLG00015018762	prpf6	96	92.242	Oryzias_latipes_hsok
ENSCAFG00000013165	PRPF6	100	91.923	ENSOMEG00000012174	prpf6	96	92.349	Oryzias_melastigma
ENSCAFG00000013165	PRPF6	100	90.977	ENSOGAG00000007573	PRPF6	100	90.977	Otolemur_garnettii
ENSCAFG00000013165	PRPF6	100	98.725	ENSOARG00000008776	PRPF6	99	98.725	Ovis_aries
ENSCAFG00000013165	PRPF6	100	97.662	ENSPPAG00000008686	PRPF6	100	97.662	Pan_paniscus
ENSCAFG00000013165	PRPF6	100	99.469	ENSPPRG00000008497	PRPF6	100	99.469	Panthera_pardus
ENSCAFG00000013165	PRPF6	97	99.455	ENSPTIG00000011184	PRPF6	97	99.455	Panthera_tigris_altaica
ENSCAFG00000013165	PRPF6	100	97.662	ENSPTRG00000013765	PRPF6	100	97.662	Pan_troglodytes
ENSCAFG00000013165	PRPF6	100	97.343	ENSPANG00000024135	PRPF6	100	97.343	Papio_anubis
ENSCAFG00000013165	PRPF6	100	93.836	ENSPKIG00000005627	prpf6	99	94.261	Paramormyrops_kingsleyae
ENSCAFG00000013165	PRPF6	94	98.186	ENSPSIG00000007717	PRPF6	100	98.186	Pelodiscus_sinensis
ENSCAFG00000013165	PRPF6	100	90.127	ENSPMGG00000008925	prpf6	96	90.340	Periophthalmus_magnuspinnatus
ENSCAFG00000013165	PRPF6	100	98.618	ENSPEMG00000016036	Prpf6	100	98.618	Peromyscus_maniculatus_bairdii
ENSCAFG00000013165	PRPF6	99	88.523	ENSPMAG00000006144	prpf6	99	88.523	Petromyzon_marinus
ENSCAFG00000013165	PRPF6	100	98.512	ENSPCIG00000017909	PRPF6	100	98.512	Phascolarctos_cinereus
ENSCAFG00000013165	PRPF6	100	92.880	ENSPFOG00000006431	prpf6	96	93.305	Poecilia_formosa
ENSCAFG00000013165	PRPF6	100	92.774	ENSPLAG00000005974	prpf6	96	93.199	Poecilia_latipinna
ENSCAFG00000013165	PRPF6	100	92.986	ENSPMEG00000009977	prpf6	96	93.411	Poecilia_mexicana
ENSCAFG00000013165	PRPF6	100	92.880	ENSPREG00000017993	prpf6	92	93.305	Poecilia_reticulata
ENSCAFG00000013165	PRPF6	100	97.131	ENSPPYG00000011256	PRPF6	100	97.131	Pongo_abelii
ENSCAFG00000013165	PRPF6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSCAFG00000013165	PRPF6	100	97.981	ENSPCOG00000016881	PRPF6	100	97.981	Propithecus_coquereli
ENSCAFG00000013165	PRPF6	100	92.880	ENSPVAG00000014316	PRPF6	100	92.880	Pteropus_vampyrus
ENSCAFG00000013165	PRPF6	100	76.008	ENSPNYG00000001939	prpf6	96	81.296	Pundamilia_nyererei
ENSCAFG00000013165	PRPF6	100	93.518	ENSPNAG00000015606	prpf6	96	93.943	Pygocentrus_nattereri
ENSCAFG00000013165	PRPF6	100	98.831	ENSRNOG00000051498	Prpf6	100	98.831	Rattus_norvegicus
ENSCAFG00000013165	PRPF6	100	97.662	ENSRBIG00000043613	PRPF6	100	97.662	Rhinopithecus_bieti
ENSCAFG00000013165	PRPF6	100	94.497	ENSRROG00000040969	PRPF6	98	97.924	Rhinopithecus_roxellana
ENSCAFG00000013165	PRPF6	91	93.426	ENSSBOG00000020632	PRPF6	93	93.426	Saimiri_boliviensis_boliviensis
ENSCAFG00000013165	PRPF6	100	98.512	ENSSHAG00000016810	PRPF6	100	98.512	Sarcophilus_harrisii
ENSCAFG00000013165	PRPF6	99	94.307	ENSSFOG00015020859	prpf6	100	94.737	Scleropages_formosus
ENSCAFG00000013165	PRPF6	100	91.711	ENSSMAG00000008112	prpf6	96	91.711	Scophthalmus_maximus
ENSCAFG00000013165	PRPF6	100	92.349	ENSSDUG00000016142	prpf6	96	92.774	Seriola_dumerili
ENSCAFG00000013165	PRPF6	100	92.349	ENSSLDG00000025283	prpf6	100	89.267	Seriola_lalandi_dorsalis
ENSCAFG00000013165	PRPF6	94	96.939	ENSSPUG00000018260	PRPF6	100	96.939	Sphenodon_punctatus
ENSCAFG00000013165	PRPF6	100	92.349	ENSSPAG00000015850	prpf6	96	92.774	Stegastes_partitus
ENSCAFG00000013165	PRPF6	100	98.831	ENSSSCG00000029119	PRPF6	100	98.753	Sus_scrofa
ENSCAFG00000013165	PRPF6	100	98.087	ENSTGUG00000007221	PRPF6	99	98.087	Taeniopygia_guttata
ENSCAFG00000013165	PRPF6	100	91.498	ENSTRUG00000002920	prpf6	96	91.923	Takifugu_rubripes
ENSCAFG00000013165	PRPF6	100	85.201	ENSTNIG00000017873	prpf6	100	85.624	Tetraodon_nigroviridis
ENSCAFG00000013165	PRPF6	89	98.343	ENSTBEG00000005348	PRPF6	85	98.343	Tupaia_belangeri
ENSCAFG00000013165	PRPF6	100	98.512	ENSTTRG00000013068	PRPF6	100	98.512	Tursiops_truncatus
ENSCAFG00000013165	PRPF6	98	97.935	ENSUMAG00000021631	PRPF6	98	97.935	Ursus_maritimus
ENSCAFG00000013165	PRPF6	100	100.000	ENSVVUG00000014948	PRPF6	100	100.000	Vulpes_vulpes
ENSCAFG00000013165	PRPF6	100	95.537	ENSXETG00000012054	prpf6	97	95.962	Xenopus_tropicalis
ENSCAFG00000013165	PRPF6	100	92.986	ENSXCOG00000008082	prpf6	96	93.411	Xiphophorus_couchianus
ENSCAFG00000013165	PRPF6	100	92.986	ENSXMAG00000015581	prpf6	96	93.411	Xiphophorus_maculatus