EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000013249 (Gene tree)
Gene ID: 487375
Gene Symbol: -
Alias: -
Full Name: elongation factor 1-alpha 1-like
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 10279 bases
Position: chr2:75787369-75797647
Accession: 487375
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000019542	GTP_EFTU	PF00009.27	2.1e-54	1	1
ENSCAFP00000019542	GTP_EFTU_D2	PF03144.25	1.3e-13	1	1
ENSCAFP00000019542	GTP_EFTU_D3	PF03143.17	8.3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000021042	-	2227	XM_022413410	ENSCAFP00000019542	461 (aa)	XP_022269118	E2RJ31

Gene Model

Click here to download ENSCAFG00000013249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000013249's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000013249	-	99	84.348	ENSCAFG00000003668	-	99	84.348
ENSCAFG00000013249	-	99	83.043	ENSCAFG00000024406	-	99	83.043
ENSCAFG00000013249	-	86	89.231	ENSCAFG00000029731	-	99	89.231
ENSCAFG00000013249	-	99	57.826	ENSCAFG00000032203	-	99	57.826
ENSCAFG00000013249	-	95	38.952	ENSCAFG00000000226	HBS1L	62	38.952
ENSCAFG00000013249	-	99	75.922	ENSCAFG00000009957	-	99	75.922
ENSCAFG00000013249	-	99	76.739	ENSCAFG00000024806	-	99	76.739
ENSCAFG00000013249	-	99	74.675	ENSCAFG00000008814	-	99	74.675
ENSCAFG00000013249	-	99	86.087	ENSCAFG00000002656	EEF1A1	99	86.087
ENSCAFG00000013249	-	95	31.011	ENSCAFG00000017216	TUFM	85	31.011
ENSCAFG00000013249	-	62	56.993	ENSCAFG00000002934	-	99	56.993
ENSCAFG00000013249	-	76	66.761	ENSCAFG00000009697	-	99	66.761
ENSCAFG00000013249	-	73	73.134	ENSCAFG00000003424	-	100	73.134
ENSCAFG00000013249	-	99	80.652	ENSCAFG00000004640	-	99	80.652
ENSCAFG00000013249	-	99	86.087	ENSCAFG00000009708	-	99	86.087
ENSCAFG00000013249	-	98	71.903	ENSCAFG00000008655	-	96	71.903
ENSCAFG00000013249	-	99	73.638	ENSCAFG00000006937	-	98	73.638
ENSCAFG00000013249	-	99	77.056	ENSCAFG00000007984	-	99	77.056
ENSCAFG00000013249	-	99	78.913	ENSCAFG00000023540	-	99	78.913
ENSCAFG00000013249	-	99	77.826	ENSCAFG00000015899	-	99	77.826
ENSCAFG00000013249	-	100	74.403	ENSCAFG00000009915	-	99	74.403
ENSCAFG00000013249	-	99	84.348	ENSCAFG00000014497	-	99	84.348
ENSCAFG00000013249	-	98	78.097	ENSCAFG00000014227	-	96	78.097
ENSCAFG00000013249	-	99	85.217	ENSCAFG00000012222	-	99	85.217
ENSCAFG00000013249	-	95	36.425	ENSCAFG00000018856	GSPT1	82	36.425
ENSCAFG00000013249	-	99	73.707	ENSCAFG00000009769	-	99	73.707
ENSCAFG00000013249	-	89	78.186	ENSCAFG00000007285	-	99	78.186
ENSCAFG00000013249	-	99	78.261	ENSCAFG00000003316	-	99	78.261
ENSCAFG00000013249	-	99	76.304	ENSCAFG00000008063	-	99	76.304
ENSCAFG00000013249	-	86	90.226	ENSCAFG00000007079	-	99	90.226
ENSCAFG00000013249	-	89	79.104	ENSCAFG00000019863	-	99	79.104
ENSCAFG00000013249	-	99	83.043	ENSCAFG00000031488	-	99	83.043
ENSCAFG00000013249	-	99	65.714	ENSCAFG00000024478	-	100	65.714
ENSCAFG00000013249	-	99	85.000	ENSCAFG00000024474	-	99	85.000
ENSCAFG00000013249	-	86	89.231	ENSCAFG00000018228	-	99	89.231
ENSCAFG00000013249	-	99	85.870	ENSCAFG00000029427	-	99	85.870
ENSCAFG00000013249	-	86	86.466	ENSCAFG00000002606	-	99	86.466
ENSCAFG00000013249	-	99	82.609	ENSCAFG00000023039	-	99	82.609
ENSCAFG00000013249	-	61	81.362	ENSCAFG00000009226	-	99	81.362
ENSCAFG00000013249	-	99	79.654	ENSCAFG00000009973	-	99	79.654
ENSCAFG00000013249	-	99	75.000	ENSCAFG00000017848	-	99	75.000
ENSCAFG00000013249	-	99	86.087	ENSCAFG00000014627	-	99	86.087
ENSCAFG00000013249	-	100	73.707	ENSCAFG00000017032	-	99	73.707
ENSCAFG00000013249	-	99	86.087	ENSCAFG00000018586	-	99	86.087
ENSCAFG00000013249	-	87	84.848	ENSCAFG00000031493	-	99	84.848
ENSCAFG00000013249	-	99	82.533	ENSCAFG00000011673	-	99	82.533
ENSCAFG00000013249	-	99	84.130	ENSCAFG00000028808	-	99	84.130
ENSCAFG00000013249	-	98	73.009	ENSCAFG00000007877	-	98	73.009

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000013249	-	67	83.062	ENSAPOG00000004757	eef1a1l1	99	93.750	Acanthochromis_polyacanthus
ENSCAFG00000013249	-	100	77.440	ENSAMEG00000004317	-	100	77.440	Ailuropoda_melanoleuca
ENSCAFG00000013249	-	100	96.312	ENSAMEG00000009677	-	100	96.312	Ailuropoda_melanoleuca
ENSCAFG00000013249	-	100	100.000	ENSCAFG00020020007	-	100	100.000	Canis_lupus_dingo
ENSCAFG00000013249	-	100	87.419	ENSCPBG00000000748	-	100	87.419	Chrysemys_picta_bellii
ENSCAFG00000013249	-	100	86.985	ENSCPBG00000000646	-	100	86.985	Chrysemys_picta_bellii
ENSCAFG00000013249	-	99	87.174	ENSDARG00000020850	eef1a1l1	99	87.174	Danio_rerio
ENSCAFG00000013249	-	98	86.123	ENSEASG00005012365	-	96	86.730	Equus_asinus_asinus
ENSCAFG00000013249	-	85	81.472	ENSEASG00005018013	-	99	81.472	Equus_asinus_asinus
ENSCAFG00000013249	-	100	83.948	ENSECAG00000022260	-	100	83.948	Equus_caballus
ENSCAFG00000013249	-	100	85.466	ENSELUG00000023536	eef1a1l1	100	85.466	Esox_lucius
ENSCAFG00000013249	-	100	85.900	ENSFCAG00000030530	-	100	85.900	Felis_catus
ENSCAFG00000013249	-	100	86.985	ENSGAGG00000000648	-	100	86.985	Gopherus_agassizii
ENSCAFG00000013249	-	100	87.419	ENSGAGG00000000642	-	100	87.419	Gopherus_agassizii
ENSCAFG00000013249	-	90	84.262	ENSLBEG00000002790	eef1a1l1	99	84.262	Labrus_bergylta
ENSCAFG00000013249	-	100	86.117	ENSLAFG00000025161	-	100	86.117	Loxodonta_africana
ENSCAFG00000013249	-	100	90.672	ENSLAFG00000028081	-	99	90.672	Loxodonta_africana
ENSCAFG00000013249	-	75	87.861	ENSOANG00000012066	-	100	87.861	Ornithorhynchus_anatinus
ENSCAFG00000013249	-	90	85.714	ENSOMEG00000006888	-	99	85.714	Oryzias_melastigma
ENSCAFG00000013249	-	100	85.900	ENSOARG00000002943	-	100	85.900	Ovis_aries
ENSCAFG00000013249	-	100	94.577	ENSPPRG00000008525	-	100	94.577	Panthera_pardus
ENSCAFG00000013249	-	97	86.161	ENSPPRG00000005678	-	96	86.161	Panthera_pardus
ENSCAFG00000013249	-	100	96.312	ENSPTIG00000006939	-	100	96.312	Panthera_tigris_altaica
ENSCAFG00000013249	-	100	86.768	ENSPSIG00000008610	-	100	86.768	Pelodiscus_sinensis
ENSCAFG00000013249	-	66	94.444	ENSPVAG00000007682	-	65	94.444	Pteropus_vampyrus
ENSCAFG00000013249	-	100	79.393	ENSSMAG00000018455	-	99	79.393	Scophthalmus_maximus
ENSCAFG00000013249	-	100	86.551	ENSSPUG00000003655	-	100	86.551	Sphenodon_punctatus
ENSCAFG00000013249	-	98	88.717	ENSSSCG00000038035	-	100	88.503	Sus_scrofa
ENSCAFG00000013249	-	100	86.117	ENSSSCG00000034113	-	100	86.117	Sus_scrofa
ENSCAFG00000013249	-	51	78.723	ENSUAMG00000006085	-	98	78.723	Ursus_americanus
ENSCAFG00000013249	-	100	94.143	ENSUAMG00000008928	-	100	94.143	Ursus_americanus
ENSCAFG00000013249	-	100	74.620	ENSUAMG00000007676	-	100	74.620	Ursus_americanus
ENSCAFG00000013249	-	100	96.746	ENSUMAG00000013211	-	100	96.746	Ursus_maritimus
ENSCAFG00000013249	-	100	99.783	ENSVVUG00000026886	-	100	99.783	Vulpes_vulpes
ENSCAFG00000013249	-	100	85.033	ENSXETG00000022604	eef1a1o	100	85.033	Xenopus_tropicalis