EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000013276 (Gene tree)
Gene ID: 480035
Gene Symbol: SMG7
Alias: -
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 60900 bases
Position: chr7:16854819-16915718
Accession: 46557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000019592	EST1	PF10374.9	6.5e-25	1	1
ENSCAFP00000019592	EST1_DNA_bind	PF10373.9	1.6e-55	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000021097	-	8246	XM_005622420	ENSCAFP00000019592	1169 (aa)	-	F1PF83

Gene Model

Click here to download ENSCAFG00000013276's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000013276's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000013276	SMG7	100	97.265	ENSG00000116698	SMG7	100	98.667	Homo_sapiens
ENSCAFG00000013276	SMG7	86	71.710	ENSAPOG00000009611	smg7	95	71.710	Acanthochromis_polyacanthus
ENSCAFG00000013276	SMG7	94	94.668	ENSAMEG00000002357	SMG7	100	94.668	Ailuropoda_melanoleuca
ENSCAFG00000013276	SMG7	95	60.788	ENSACIG00000015152	smg7	100	60.925	Amphilophus_citrinellus
ENSCAFG00000013276	SMG7	97	63.846	ENSAOCG00000013538	smg7	99	64.421	Amphiprion_ocellaris
ENSCAFG00000013276	SMG7	97	63.711	ENSAPEG00000007851	smg7	99	64.286	Amphiprion_percula
ENSCAFG00000013276	SMG7	97	61.311	ENSATEG00000006931	smg7	99	62.111	Anabas_testudineus
ENSCAFG00000013276	SMG7	97	82.209	ENSAPLG00000015811	SMG7	99	82.333	Anas_platyrhynchos
ENSCAFG00000013276	SMG7	97	84.506	ENSACAG00000014989	SMG7	99	85.029	Anolis_carolinensis
ENSCAFG00000013276	SMG7	100	93.421	ENSANAG00000028114	SMG7	100	93.421	Aotus_nancymaae
ENSCAFG00000013276	SMG7	97	64.303	ENSACLG00000022079	smg7	99	64.410	Astatotilapia_calliptera
ENSCAFG00000013276	SMG7	97	66.946	ENSAMXG00000020809	smg7	99	67.309	Astyanax_mexicanus
ENSCAFG00000013276	SMG7	100	97.009	ENSBTAG00000008003	SMG7	100	97.009	Bos_taurus
ENSCAFG00000013276	SMG7	99	97.089	ENSCJAG00000005135	SMG7	100	97.084	Callithrix_jacchus
ENSCAFG00000013276	SMG7	100	100.000	ENSCAFG00020015475	SMG7	100	100.000	Canis_lupus_dingo
ENSCAFG00000013276	SMG7	97	96.646	ENSCHIG00000018192	SMG7	99	96.646	Capra_hircus
ENSCAFG00000013276	SMG7	100	96.581	ENSTSYG00000002667	SMG7	100	96.581	Carlito_syrichta
ENSCAFG00000013276	SMG7	99	97.082	ENSCPOG00000008906	SMG7	100	97.082	Cavia_porcellus
ENSCAFG00000013276	SMG7	94	93.362	ENSCCAG00000028596	SMG7	100	93.362	Cebus_capucinus
ENSCAFG00000013276	SMG7	100	97.436	ENSCATG00000011063	SMG7	100	97.436	Cercocebus_atys
ENSCAFG00000013276	SMG7	100	96.496	ENSCLAG00000010751	SMG7	100	96.519	Chinchilla_lanigera
ENSCAFG00000013276	SMG7	100	97.265	ENSCSAG00000012654	SMG7	100	97.265	Chlorocebus_sabaeus
ENSCAFG00000013276	SMG7	89	88.061	ENSCHOG00000010522	SMG7	93	88.539	Choloepus_hoffmanni
ENSCAFG00000013276	SMG7	97	87.700	ENSCPBG00000015724	SMG7	99	87.616	Chrysemys_picta_bellii
ENSCAFG00000013276	SMG7	94	93.450	ENSCANG00000015680	SMG7	100	93.450	Colobus_angolensis_palliatus
ENSCAFG00000013276	SMG7	99	95.540	ENSCGRG00001013705	Smg7	100	95.369	Cricetulus_griseus_chok1gshd
ENSCAFG00000013276	SMG7	98	95.561	ENSCGRG00000018401	Smg7	100	95.387	Cricetulus_griseus_crigri
ENSCAFG00000013276	SMG7	90	68.500	ENSCVAG00000011842	smg7	100	68.500	Cyprinodon_variegatus
ENSCAFG00000013276	SMG7	97	66.058	ENSDARG00000060767	smg7	99	66.307	Danio_rerio
ENSCAFG00000013276	SMG7	98	96.171	ENSDORG00000007331	Smg7	100	96.171	Dipodomys_ordii
ENSCAFG00000013276	SMG7	94	95.164	ENSETEG00000002654	SMG7	99	95.255	Echinops_telfairi
ENSCAFG00000013276	SMG7	100	98.120	ENSEASG00005006524	SMG7	100	98.120	Equus_asinus_asinus
ENSCAFG00000013276	SMG7	100	98.205	ENSECAG00000004313	SMG7	100	98.205	Equus_caballus
ENSCAFG00000013276	SMG7	93	97.325	ENSEEUG00000002024	SMG7	92	97.325	Erinaceus_europaeus
ENSCAFG00000013276	SMG7	97	64.992	ENSELUG00000010293	smg7	99	65.239	Esox_lucius
ENSCAFG00000013276	SMG7	99	98.459	ENSFCAG00000010900	SMG7	100	98.459	Felis_catus
ENSCAFG00000013276	SMG7	96	82.738	ENSFALG00000003047	SMG7	100	83.078	Ficedula_albicollis
ENSCAFG00000013276	SMG7	97	96.640	ENSFDAG00000012121	SMG7	99	96.524	Fukomys_damarensis
ENSCAFG00000013276	SMG7	97	59.983	ENSFHEG00000011073	smg7	99	60.265	Fundulus_heteroclitus
ENSCAFG00000013276	SMG7	94	56.826	ENSGMOG00000004916	smg7	92	67.297	Gadus_morhua
ENSCAFG00000013276	SMG7	97	81.703	ENSGALG00000004667	SMG7	99	82.125	Gallus_gallus
ENSCAFG00000013276	SMG7	97	60.298	ENSGAFG00000019000	smg7	99	60.282	Gambusia_affinis
ENSCAFG00000013276	SMG7	94	64.737	ENSGACG00000001634	smg7	99	64.654	Gasterosteus_aculeatus
ENSCAFG00000013276	SMG7	100	97.179	ENSGGOG00000002342	SMG7	100	97.179	Gorilla_gorilla
ENSCAFG00000013276	SMG7	97	64.303	ENSHBUG00000003726	smg7	97	72.081	Haplochromis_burtoni
ENSCAFG00000013276	SMG7	96	96.613	ENSHGLG00000009353	SMG7	100	96.613	Heterocephalus_glaber_female
ENSCAFG00000013276	SMG7	96	94.920	ENSHGLG00100009637	-	100	94.920	Heterocephalus_glaber_male
ENSCAFG00000013276	SMG7	97	88.614	ENSHGLG00100004878	-	99	88.438	Heterocephalus_glaber_male
ENSCAFG00000013276	SMG7	97	66.919	ENSIPUG00000016997	smg7	99	67.340	Ictalurus_punctatus
ENSCAFG00000013276	SMG7	98	97.563	ENSSTOG00000000401	SMG7	100	97.563	Ictidomys_tridecemlineatus
ENSCAFG00000013276	SMG7	97	94.263	ENSJJAG00000012351	Smg7	99	94.351	Jaculus_jaculus
ENSCAFG00000013276	SMG7	95	57.917	ENSKMAG00000004900	smg7	100	58.749	Kryptolebias_marmoratus
ENSCAFG00000013276	SMG7	97	62.063	ENSLBEG00000002983	smg7	99	61.897	Labrus_bergylta
ENSCAFG00000013276	SMG7	97	75.586	ENSLACG00000000972	SMG7	99	76.021	Latimeria_chalumnae
ENSCAFG00000013276	SMG7	97	67.140	ENSLOCG00000002010	smg7	99	67.084	Lepisosteus_oculatus
ENSCAFG00000013276	SMG7	98	97.128	ENSLAFG00000008186	SMG7	100	97.128	Loxodonta_africana
ENSCAFG00000013276	SMG7	100	97.350	ENSMFAG00000031653	SMG7	100	97.350	Macaca_fascicularis
ENSCAFG00000013276	SMG7	100	97.436	ENSMMUG00000018458	SMG7	100	97.436	Macaca_mulatta
ENSCAFG00000013276	SMG7	94	93.537	ENSMNEG00000034798	SMG7	100	93.537	Macaca_nemestrina
ENSCAFG00000013276	SMG7	100	97.436	ENSMLEG00000037170	SMG7	100	97.436	Mandrillus_leucophaeus
ENSCAFG00000013276	SMG7	85	63.246	ENSMAMG00000018733	smg7	84	64.561	Mastacembelus_armatus
ENSCAFG00000013276	SMG7	97	64.174	ENSMZEG00005015247	smg7	99	64.244	Maylandia_zebra
ENSCAFG00000013276	SMG7	95	81.320	ENSMGAG00000001561	SMG7	98	81.577	Meleagris_gallopavo
ENSCAFG00000013276	SMG7	98	95.997	ENSMAUG00000019484	Smg7	100	95.822	Mesocricetus_auratus
ENSCAFG00000013276	SMG7	98	97.822	ENSMICG00000007145	SMG7	100	97.822	Microcebus_murinus
ENSCAFG00000013276	SMG7	98	95.997	ENSMOCG00000020748	Smg7	100	95.822	Microtus_ochrogaster
ENSCAFG00000013276	SMG7	97	59.683	ENSMMOG00000001524	smg7	99	59.967	Mola_mola
ENSCAFG00000013276	SMG7	90	84.636	ENSMODG00000007139	SMG7	99	84.727	Monodelphis_domestica
ENSCAFG00000013276	SMG7	95	69.154	ENSMALG00000000061	smg7	94	69.154	Monopterus_albus
ENSCAFG00000013276	SMG7	98	95.648	MGP_CAROLIEiJ_G0014704	Smg7	100	95.213	Mus_caroli
ENSCAFG00000013276	SMG7	98	95.474	ENSMUSG00000042772	Smg7	100	95.300	Mus_musculus
ENSCAFG00000013276	SMG7	98	95.561	MGP_PahariEiJ_G0027940	Smg7	100	95.387	Mus_pahari
ENSCAFG00000013276	SMG7	98	95.561	MGP_SPRETEiJ_G0015511	Smg7	100	95.387	Mus_spretus
ENSCAFG00000013276	SMG7	96	98.751	ENSMPUG00000011732	SMG7	97	98.751	Mustela_putorius_furo
ENSCAFG00000013276	SMG7	97	97.087	ENSMLUG00000015417	SMG7	99	97.087	Myotis_lucifugus
ENSCAFG00000013276	SMG7	98	95.906	ENSNGAG00000009836	Smg7	100	95.906	Nannospalax_galili
ENSCAFG00000013276	SMG7	96	57.877	ENSNBRG00000024343	smg7	98	70.000	Neolamprologus_brichardi
ENSCAFG00000013276	SMG7	100	97.521	ENSNLEG00000018018	SMG7	100	97.521	Nomascus_leucogenys
ENSCAFG00000013276	SMG7	75	85.007	ENSMEUG00000004681	SMG7	77	85.356	Notamacropus_eugenii
ENSCAFG00000013276	SMG7	94	84.826	ENSOPRG00000013942	SMG7	96	84.826	Ochotona_princeps
ENSCAFG00000013276	SMG7	98	96.432	ENSODEG00000010390	SMG7	100	96.432	Octodon_degus
ENSCAFG00000013276	SMG7	97	61.519	ENSONIG00000000277	smg7	99	61.787	Oreochromis_niloticus
ENSCAFG00000013276	SMG7	96	91.135	ENSOANG00000000994	SMG7	100	91.223	Ornithorhynchus_anatinus
ENSCAFG00000013276	SMG7	100	89.316	ENSOCUG00000005887	SMG7	95	89.487	Oryctolagus_cuniculus
ENSCAFG00000013276	SMG7	97	62.115	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSCAFG00000013276	SMG7	97	62.448	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSCAFG00000013276	SMG7	97	64.569	ENSORLG00015012289	smg7	99	62.656	Oryzias_latipes_hsok
ENSCAFG00000013276	SMG7	97	62.407	ENSOMEG00000002328	smg7	99	62.769	Oryzias_melastigma
ENSCAFG00000013276	SMG7	94	96.804	ENSOGAG00000003107	SMG7	93	96.804	Otolemur_garnettii
ENSCAFG00000013276	SMG7	100	96.581	ENSOARG00000001352	SMG7	100	96.581	Ovis_aries
ENSCAFG00000013276	SMG7	94	93.537	ENSPPAG00000031619	SMG7	100	93.537	Pan_paniscus
ENSCAFG00000013276	SMG7	99	98.630	ENSPPRG00000011222	SMG7	100	98.630	Panthera_pardus
ENSCAFG00000013276	SMG7	94	98.630	ENSPTIG00000007242	SMG7	100	94.668	Panthera_tigris_altaica
ENSCAFG00000013276	SMG7	94	97.354	ENSPTRG00000001764	SMG7	100	93.537	Pan_troglodytes
ENSCAFG00000013276	SMG7	100	97.436	ENSPANG00000004520	SMG7	100	97.436	Papio_anubis
ENSCAFG00000013276	SMG7	97	64.020	ENSPKIG00000007242	smg7	99	68.000	Paramormyrops_kingsleyae
ENSCAFG00000013276	SMG7	97	90.941	ENSPSIG00000012201	SMG7	99	90.765	Pelodiscus_sinensis
ENSCAFG00000013276	SMG7	54	57.653	ENSPMGG00000021833	smg7	89	57.653	Periophthalmus_magnuspinnatus
ENSCAFG00000013276	SMG7	98	94.778	ENSPEMG00000011315	Smg7	100	94.604	Peromyscus_maniculatus_bairdii
ENSCAFG00000013276	SMG7	97	89.322	ENSPCIG00000003786	SMG7	99	90.909	Phascolarctos_cinereus
ENSCAFG00000013276	SMG7	97	61.921	ENSPFOG00000019219	smg7	99	62.314	Poecilia_formosa
ENSCAFG00000013276	SMG7	97	59.884	ENSPLAG00000001446	smg7	99	59.801	Poecilia_latipinna
ENSCAFG00000013276	SMG7	94	59.316	ENSPMEG00000005218	smg7	99	59.231	Poecilia_mexicana
ENSCAFG00000013276	SMG7	85	59.564	ENSPREG00000019039	smg7	92	60.227	Poecilia_reticulata
ENSCAFG00000013276	SMG7	97	88.974	ENSPPYG00000000427	SMG7	99	89.059	Pongo_abelii
ENSCAFG00000013276	SMG7	93	85.517	ENSPCAG00000008360	SMG7	94	85.332	Procavia_capensis
ENSCAFG00000013276	SMG7	100	97.947	ENSPCOG00000011996	SMG7	100	97.947	Propithecus_coquereli
ENSCAFG00000013276	SMG7	89	92.308	ENSPVAG00000000851	SMG7	89	92.308	Pteropus_vampyrus
ENSCAFG00000013276	SMG7	97	64.162	ENSPNYG00000007643	smg7	99	64.268	Pundamilia_nyererei
ENSCAFG00000013276	SMG7	97	66.140	ENSPNAG00000011374	smg7	98	69.192	Pygocentrus_nattereri
ENSCAFG00000013276	SMG7	99	94.859	ENSRNOG00000027962	Smg7	100	94.974	Rattus_norvegicus
ENSCAFG00000013276	SMG7	100	97.350	ENSRBIG00000036316	SMG7	100	97.350	Rhinopithecus_bieti
ENSCAFG00000013276	SMG7	100	97.350	ENSRROG00000035719	SMG7	100	97.350	Rhinopithecus_roxellana
ENSCAFG00000013276	SMG7	97	97.264	ENSSBOG00000023454	SMG7	99	97.264	Saimiri_boliviensis_boliviensis
ENSCAFG00000013276	SMG7	97	85.013	ENSSHAG00000013147	SMG7	99	84.843	Sarcophilus_harrisii
ENSCAFG00000013276	SMG7	89	76.842	ENSSFOG00015017252	smg7	99	76.842	Scleropages_formosus
ENSCAFG00000013276	SMG7	97	64.594	ENSSMAG00000006067	smg7	99	64.652	Scophthalmus_maximus
ENSCAFG00000013276	SMG7	97	60.720	ENSSDUG00000017543	smg7	99	61.526	Seriola_dumerili
ENSCAFG00000013276	SMG7	97	82.437	ENSSPUG00000002064	SMG7	99	82.353	Sphenodon_punctatus
ENSCAFG00000013276	SMG7	96	62.944	ENSSPAG00000008733	smg7	98	63.029	Stegastes_partitus
ENSCAFG00000013276	SMG7	100	97.949	ENSSSCG00000015558	SMG7	100	97.949	Sus_scrofa
ENSCAFG00000013276	SMG7	97	81.857	ENSTGUG00000003928	SMG7	100	82.194	Taeniopygia_guttata
ENSCAFG00000013276	SMG7	97	63.705	ENSTNIG00000002802	smg7	99	63.331	Tetraodon_nigroviridis
ENSCAFG00000013276	SMG7	75	95.339	ENSTBEG00000003220	SMG7	75	95.339	Tupaia_belangeri
ENSCAFG00000013276	SMG7	94	97.808	ENSTTRG00000014778	SMG7	94	97.808	Tursiops_truncatus
ENSCAFG00000013276	SMG7	94	94.353	ENSUAMG00000017473	SMG7	100	94.353	Ursus_americanus
ENSCAFG00000013276	SMG7	94	98.816	ENSUMAG00000016389	SMG7	100	98.816	Ursus_maritimus
ENSCAFG00000013276	SMG7	100	99.829	ENSVVUG00000008976	SMG7	100	99.829	Vulpes_vulpes
ENSCAFG00000013276	SMG7	97	66.389	ENSXETG00000012528	smg7	99	66.750	Xenopus_tropicalis
ENSCAFG00000013276	SMG7	97	60.332	ENSXMAG00000007123	smg7	99	60.415	Xiphophorus_maculatus