EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000013401 (Gene tree)
Gene ID: 403728
Gene Symbol: YBX3
Alias: -
Full Name: Y-box binding protein 3
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 26835 bases
Position: chr27:35038368-35065202
Accession: 48480
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000036426	CSD	PF00313.22	9.6e-27	1	1
ENSCAFP00000019747	CSD	PF00313.22	1.5e-26	1	1
ENSCAFP00000037091	CSD	PF00313.22	2e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000021267	-	1113	-	ENSCAFP00000019747	370 (aa)	-	F1PB10
ENSCAFT00000044569	-	654	-	ENSCAFP00000037091	217 (aa)	-	J9NV99
ENSCAFT00000048154	-	2969	-	ENSCAFP00000036426	314 (aa)	-	J9NTE1

Gene Model

Click here to download ENSCAFG00000013401's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa04530	Tight junction	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000013401's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000013401	YBX3	100	61.712	ENSCAFG00000030502	-	84	61.818
ENSCAFG00000013401	YBX3	79	49.020	ENSCAFG00000017286	-	84	55.670

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000013401	YBX3	100	92.202	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSCAFG00000013401	YBX3	84	97.736	ENSAMEG00000009393	YBX3	82	97.552	Ailuropoda_melanoleuca
ENSCAFG00000013401	YBX3	99	59.011	ENSAPLG00000003147	YBX3	76	98.077	Anas_platyrhynchos
ENSCAFG00000013401	YBX3	100	92.661	ENSANAG00000024492	-	91	92.361	Aotus_nancymaae
ENSCAFG00000013401	YBX3	100	68.304	ENSANAG00000033366	-	68	81.538	Aotus_nancymaae
ENSCAFG00000013401	YBX3	85	93.985	ENSBTAG00000009663	YBX3	76	90.559	Bos_taurus
ENSCAFG00000013401	YBX3	100	92.661	ENSCJAG00000021660	-	78	92.361	Callithrix_jacchus
ENSCAFG00000013401	YBX3	93	77.451	ENSCJAG00000033824	-	79	89.041	Callithrix_jacchus
ENSCAFG00000013401	YBX3	100	94.931	ENSCAFG00020006412	YBX3	76	95.804	Canis_lupus_dingo
ENSCAFG00000013401	YBX3	84	94.340	ENSCHIG00000010863	YBX3	80	94.056	Capra_hircus
ENSCAFG00000013401	YBX3	100	83.486	ENSTSYG00000035821	-	73	82.569	Carlito_syrichta
ENSCAFG00000013401	YBX3	100	93.578	ENSTSYG00000004204	-	89	93.103	Carlito_syrichta
ENSCAFG00000013401	YBX3	88	88.489	ENSCAPG00000015039	YBX3	94	88.927	Cavia_aperea
ENSCAFG00000013401	YBX3	100	93.088	ENSCPOG00000011329	YBX3	85	89.547	Cavia_porcellus
ENSCAFG00000013401	YBX3	100	92.661	ENSCCAG00000016469	YBX3	77	92.014	Cebus_capucinus
ENSCAFG00000013401	YBX3	100	92.202	ENSCATG00000034411	YBX3	77	92.361	Cercocebus_atys
ENSCAFG00000013401	YBX3	87	90.876	ENSCLAG00000016030	YBX3	95	89.965	Chinchilla_lanigera
ENSCAFG00000013401	YBX3	84	92.884	ENSCSAG00000008744	YBX3	77	92.014	Chlorocebus_sabaeus
ENSCAFG00000013401	YBX3	98	86.321	ENSCPBG00000014147	YBX3	80	80.488	Chrysemys_picta_bellii
ENSCAFG00000013401	YBX3	100	91.743	ENSCANG00000036801	YBX3	91	92.014	Colobus_angolensis_palliatus
ENSCAFG00000013401	YBX3	100	93.088	ENSCGRG00001016148	Ybx3	79	93.031	Cricetulus_griseus_chok1gshd
ENSCAFG00000013401	YBX3	86	91.336	ENSCGRG00000004563	Ybx3	99	91.156	Cricetulus_griseus_crigri
ENSCAFG00000013401	YBX3	84	95.076	ENSDORG00000009103	Ybx3	81	93.080	Dipodomys_ordii
ENSCAFG00000013401	YBX3	80	88.627	ENSETEG00000002557	YBX3	99	83.803	Echinops_telfairi
ENSCAFG00000013401	YBX3	100	88.018	ENSEASG00005014726	YBX3	77	90.210	Equus_asinus_asinus
ENSCAFG00000013401	YBX3	100	93.088	ENSECAG00000013777	YBX3	77	94.056	Equus_caballus
ENSCAFG00000013401	YBX3	83	92.045	ENSEEUG00000010415	YBX3	100	92.958	Erinaceus_europaeus
ENSCAFG00000013401	YBX3	100	97.706	ENSFCAG00000027748	YBX3	77	96.516	Felis_catus
ENSCAFG00000013401	YBX3	99	94.444	ENSFALG00000003661	YBX3	71	98.837	Ficedula_albicollis
ENSCAFG00000013401	YBX3	87	86.545	ENSFDAG00000021192	YBX3	93	86.159	Fukomys_damarensis
ENSCAFG00000013401	YBX3	100	83.410	ENSGALG00000031890	YBX3	74	79.263	Gallus_gallus
ENSCAFG00000013401	YBX3	100	85.253	ENSGAGG00000017780	YBX3	75	85.253	Gopherus_agassizii
ENSCAFG00000013401	YBX3	100	92.202	ENSGGOG00000001352	YBX3	77	92.361	Gorilla_gorilla
ENSCAFG00000013401	YBX3	90	79.500	ENSHGLG00000015495	-	78	77.820	Heterocephalus_glaber_female
ENSCAFG00000013401	YBX3	100	67.037	ENSHGLG00000014798	-	85	78.007	Heterocephalus_glaber_female
ENSCAFG00000013401	YBX3	100	94.037	ENSHGLG00100003589	YBX3	87	90.826	Heterocephalus_glaber_male
ENSCAFG00000013401	YBX3	88	87.681	ENSSTOG00000002108	-	89	88.235	Ictidomys_tridecemlineatus
ENSCAFG00000013401	YBX3	84	89.474	ENSSTOG00000032577	-	81	89.860	Ictidomys_tridecemlineatus
ENSCAFG00000013401	YBX3	100	68.664	ENSJJAG00000014239	Ybx3	92	82.716	Jaculus_jaculus
ENSCAFG00000013401	YBX3	84	95.865	ENSLAFG00000017247	YBX3	83	91.815	Loxodonta_africana
ENSCAFG00000013401	YBX3	100	91.743	ENSMFAG00000039369	YBX3	77	92.014	Macaca_fascicularis
ENSCAFG00000013401	YBX3	84	92.884	ENSMMUG00000022469	YBX3	89	92.014	Macaca_mulatta
ENSCAFG00000013401	YBX3	100	91.743	ENSMNEG00000045109	YBX3	77	92.014	Macaca_nemestrina
ENSCAFG00000013401	YBX3	100	95.392	ENSMLEG00000033618	YBX3	82	93.426	Mandrillus_leucophaeus
ENSCAFG00000013401	YBX3	99	83.333	ENSMGAG00000014224	YBX3	100	83.333	Meleagris_gallopavo
ENSCAFG00000013401	YBX3	100	92.627	ENSMAUG00000012185	Ybx3	89	92.683	Mesocricetus_auratus
ENSCAFG00000013401	YBX3	84	96.617	ENSMICG00000038002	-	78	95.470	Microcebus_murinus
ENSCAFG00000013401	YBX3	100	82.028	ENSMICG00000031459	-	75	81.429	Microcebus_murinus
ENSCAFG00000013401	YBX3	100	93.548	ENSMOCG00000016291	Ybx3	94	93.031	Microtus_ochrogaster
ENSCAFG00000013401	YBX3	87	87.273	ENSMODG00000018248	YBX3	91	85.965	Monodelphis_domestica
ENSCAFG00000013401	YBX3	100	94.009	MGP_CAROLIEiJ_G0028947	Ybx3	79	93.031	Mus_caroli
ENSCAFG00000013401	YBX3	100	93.548	ENSMUSG00000030189	Ybx3	79	93.031	Mus_musculus
ENSCAFG00000013401	YBX3	100	93.548	MGP_PahariEiJ_G0022709	Ybx3	79	93.031	Mus_pahari
ENSCAFG00000013401	YBX3	100	94.009	MGP_SPRETEiJ_G0029994	Ybx3	79	93.380	Mus_spretus
ENSCAFG00000013401	YBX3	99	88.393	ENSMPUG00000011810	YBX3	78	77.627	Mustela_putorius_furo
ENSCAFG00000013401	YBX3	77	95.565	ENSMLUG00000007476	YBX3	100	95.896	Myotis_lucifugus
ENSCAFG00000013401	YBX3	98	87.442	ENSNGAG00000000710	Ybx3	88	87.442	Nannospalax_galili
ENSCAFG00000013401	YBX3	100	88.991	ENSNLEG00000034844	YBX3	82	88.194	Nomascus_leucogenys
ENSCAFG00000013401	YBX3	55	79.070	ENSMEUG00000002507	-	81	79.070	Notamacropus_eugenii
ENSCAFG00000013401	YBX3	84	86.466	ENSODEG00000017957	YBX3	84	85.366	Octodon_degus
ENSCAFG00000013401	YBX3	84	89.474	ENSOCUG00000001889	YBX3	81	90.747	Oryctolagus_cuniculus
ENSCAFG00000013401	YBX3	97	98.000	ENSOGAG00000013245	YBX3	78	93.197	Otolemur_garnettii
ENSCAFG00000013401	YBX3	92	98.864	ENSOARG00000020919	YBX3	97	84.722	Ovis_aries
ENSCAFG00000013401	YBX3	100	92.202	ENSPPAG00000039068	YBX3	80	92.361	Pan_paniscus
ENSCAFG00000013401	YBX3	100	98.165	ENSPPRG00000005859	YBX3	77	96.864	Panthera_pardus
ENSCAFG00000013401	YBX3	87	99.267	ENSPTIG00000005322	YBX3	82	97.917	Panthera_tigris_altaica
ENSCAFG00000013401	YBX3	100	92.202	ENSPTRG00000004681	YBX3	77	92.361	Pan_troglodytes
ENSCAFG00000013401	YBX3	100	92.202	ENSPANG00000010280	YBX3	77	92.361	Papio_anubis
ENSCAFG00000013401	YBX3	99	86.512	ENSPSIG00000009247	YBX3	92	100.000	Pelodiscus_sinensis
ENSCAFG00000013401	YBX3	100	93.548	ENSPEMG00000012132	-	90	93.380	Peromyscus_maniculatus_bairdii
ENSCAFG00000013401	YBX3	100	93.548	ENSPEMG00000010391	-	82	93.548	Peromyscus_maniculatus_bairdii
ENSCAFG00000013401	YBX3	75	85.294	ENSPCIG00000029949	YBX3	100	82.558	Phascolarctos_cinereus
ENSCAFG00000013401	YBX3	84	92.884	ENSPPYG00000004279	YBX3	78	92.014	Pongo_abelii
ENSCAFG00000013401	YBX3	66	94.686	ENSPCAG00000001397	YBX3	70	94.059	Procavia_capensis
ENSCAFG00000013401	YBX3	55	90.286	ENSPCOG00000011663	YBX3	68	89.773	Propithecus_coquereli
ENSCAFG00000013401	YBX3	68	96.279	ENSPVAG00000006740	YBX3	58	96.279	Pteropus_vampyrus
ENSCAFG00000013401	YBX3	100	94.009	ENSRNOG00000005480	Ybx3	79	93.380	Rattus_norvegicus
ENSCAFG00000013401	YBX3	100	92.202	ENSRBIG00000039208	YBX3	78	92.014	Rhinopithecus_bieti
ENSCAFG00000013401	YBX3	100	92.202	ENSRROG00000029638	YBX3	78	92.014	Rhinopithecus_roxellana
ENSCAFG00000013401	YBX3	99	96.279	ENSSBOG00000030573	YBX3	85	92.708	Saimiri_boliviensis_boliviensis
ENSCAFG00000013401	YBX3	90	98.837	ENSSHAG00000003262	YBX3	98	82.474	Sarcophilus_harrisii
ENSCAFG00000013401	YBX3	64	87.770	ENSSPUG00000009911	-	62	87.121	Sphenodon_punctatus
ENSCAFG00000013401	YBX3	100	97.248	ENSSSCG00000000633	YBX3	76	95.819	Sus_scrofa
ENSCAFG00000013401	YBX3	98	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSCAFG00000013401	YBX3	84	95.880	ENSTBEG00000012570	YBX3	79	94.444	Tupaia_belangeri
ENSCAFG00000013401	YBX3	77	85.366	ENSTTRG00000008045	YBX3	100	86.090	Tursiops_truncatus
ENSCAFG00000013401	YBX3	82	94.531	ENSUAMG00000016662	YBX3	100	95.290	Ursus_americanus
ENSCAFG00000013401	YBX3	90	98.227	ENSUMAG00000016118	YBX3	96	96.886	Ursus_maritimus
ENSCAFG00000013401	YBX3	80	100.000	ENSVPAG00000000876	YBX3	100	69.965	Vicugna_pacos
ENSCAFG00000013401	YBX3	82	95.312	ENSVVUG00000004956	YBX3	100	95.652	Vulpes_vulpes
ENSCAFG00000013401	YBX3	99	72.603	ENSXETG00000016239	ybx3	88	71.689	Xenopus_tropicalis