EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000013445 (Gene tree)
Gene ID: 478606
Gene Symbol: LSG1
Alias: -
Full Name: large 60S subunit nuclear export GTPase 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 29563 bases
Position: chr33:31087210-31116772
Accession: 42837
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000019804	MMR_HSR1	PF01926.23	5.6e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000021328	-	2026	XM_005639658	ENSCAFP00000019804	626 (aa)	-	F1P8H7

Gene Model

Click here to download ENSCAFG00000013445's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03008	Ribosome biogenesis in eukaryotes	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000013445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000013445	LSG1	99	84.160	ENSG00000041802	LSG1	95	84.160	Homo_sapiens
ENSCAFG00000013445	LSG1	100	66.296	ENSAPOG00000009694	lsg1	95	66.614	Acanthochromis_polyacanthus
ENSCAFG00000013445	LSG1	100	88.517	ENSAMEG00000009343	LSG1	95	88.517	Ailuropoda_melanoleuca
ENSCAFG00000013445	LSG1	100	64.706	ENSACIG00000012406	lsg1	95	65.016	Amphilophus_citrinellus
ENSCAFG00000013445	LSG1	100	65.501	ENSAOCG00000016066	lsg1	95	66.032	Amphiprion_ocellaris
ENSCAFG00000013445	LSG1	100	66.137	ENSAPEG00000003252	lsg1	95	66.190	Amphiprion_percula
ENSCAFG00000013445	LSG1	100	64.058	ENSATEG00000011794	lsg1	95	63.365	Anabas_testudineus
ENSCAFG00000013445	LSG1	99	64.399	ENSACAG00000004222	LSG1	99	63.608	Anolis_carolinensis
ENSCAFG00000013445	LSG1	99	85.120	ENSANAG00000021153	LSG1	95	85.120	Aotus_nancymaae
ENSCAFG00000013445	LSG1	100	64.734	ENSACLG00000000520	lsg1	95	64.263	Astatotilapia_calliptera
ENSCAFG00000013445	LSG1	100	64.659	ENSAMXG00000008271	lsg1	95	64.659	Astyanax_mexicanus
ENSCAFG00000013445	LSG1	99	80.640	ENSBTAG00000008461	LSG1	95	82.080	Bos_taurus
ENSCAFG00000013445	LSG1	65	52.792	WBGene00016907	C53H9.2	81	58.462	Caenorhabditis_elegans
ENSCAFG00000013445	LSG1	99	84.800	ENSCJAG00000013962	LSG1	95	84.800	Callithrix_jacchus
ENSCAFG00000013445	LSG1	100	98.569	ENSCAFG00020002216	LSG1	99	98.558	Canis_lupus_dingo
ENSCAFG00000013445	LSG1	100	82.588	ENSCHIG00000015769	LSG1	95	82.588	Capra_hircus
ENSCAFG00000013445	LSG1	99	83.200	ENSTSYG00000001447	LSG1	95	83.200	Carlito_syrichta
ENSCAFG00000013445	LSG1	99	74.682	ENSCAPG00000009856	LSG1	99	74.080	Cavia_aperea
ENSCAFG00000013445	LSG1	99	83.840	ENSCCAG00000035744	LSG1	95	83.840	Cebus_capucinus
ENSCAFG00000013445	LSG1	99	84.800	ENSCATG00000042060	LSG1	95	83.200	Cercocebus_atys
ENSCAFG00000013445	LSG1	99	85.280	ENSCSAG00000008796	LSG1	87	85.280	Chlorocebus_sabaeus
ENSCAFG00000013445	LSG1	100	69.904	ENSCPBG00000015941	LSG1	79	69.904	Chrysemys_picta_bellii
ENSCAFG00000013445	LSG1	64	63.684	ENSCING00000007079	-	85	63.684	Ciona_intestinalis
ENSCAFG00000013445	LSG1	72	59.615	ENSCSAVG00000002514	-	88	59.615	Ciona_savignyi
ENSCAFG00000013445	LSG1	99	84.800	ENSCANG00000030709	LSG1	95	84.800	Colobus_angolensis_palliatus
ENSCAFG00000013445	LSG1	99	80.831	ENSCGRG00001019846	Lsg1	95	80.831	Cricetulus_griseus_chok1gshd
ENSCAFG00000013445	LSG1	99	80.831	ENSCGRG00000014617	Lsg1	95	80.831	Cricetulus_griseus_crigri
ENSCAFG00000013445	LSG1	100	64.364	ENSCSEG00000008522	lsg1	95	64.465	Cynoglossus_semilaevis
ENSCAFG00000013445	LSG1	100	65.335	ENSCVAG00000002484	lsg1	95	66.137	Cyprinodon_variegatus
ENSCAFG00000013445	LSG1	100	67.091	ENSDARG00000015352	lsg1	95	66.986	Danio_rerio
ENSCAFG00000013445	LSG1	99	81.688	ENSDNOG00000006224	LSG1	95	81.369	Dasypus_novemcinctus
ENSCAFG00000013445	LSG1	99	43.354	FBgn0266284	Ns3	94	49.365	Drosophila_melanogaster
ENSCAFG00000013445	LSG1	88	97.619	ENSETEG00000003888	LSG1	84	97.619	Echinops_telfairi
ENSCAFG00000013445	LSG1	93	54.698	ENSEBUG00000003119	lsg1	85	53.630	Eptatretus_burgeri
ENSCAFG00000013445	LSG1	99	85.600	ENSEASG00005000678	LSG1	95	85.600	Equus_asinus_asinus
ENSCAFG00000013445	LSG1	99	85.760	ENSECAG00000017659	LSG1	95	85.760	Equus_caballus
ENSCAFG00000013445	LSG1	79	82.051	ENSEEUG00000015217	LSG1	75	82.051	Erinaceus_europaeus
ENSCAFG00000013445	LSG1	100	62.381	ENSELUG00000023973	lsg1	95	61.927	Esox_lucius
ENSCAFG00000013445	LSG1	100	89.617	ENSFCAG00000024957	LSG1	95	89.617	Felis_catus
ENSCAFG00000013445	LSG1	97	65.203	ENSFALG00000007210	LSG1	94	65.203	Ficedula_albicollis
ENSCAFG00000013445	LSG1	99	76.825	ENSFDAG00000017373	LSG1	95	77.280	Fukomys_damarensis
ENSCAFG00000013445	LSG1	99	64.593	ENSFHEG00000003680	lsg1	94	64.753	Fundulus_heteroclitus
ENSCAFG00000013445	LSG1	82	78.404	ENSGMOG00000015834	lsg1	81	78.404	Gadus_morhua
ENSCAFG00000013445	LSG1	97	65.466	ENSGALG00000007058	LSG1	82	65.203	Gallus_gallus
ENSCAFG00000013445	LSG1	99	64.865	ENSGAFG00000015831	lsg1	95	64.865	Gambusia_affinis
ENSCAFG00000013445	LSG1	99	63.191	ENSGACG00000009323	lsg1	94	63.091	Gasterosteus_aculeatus
ENSCAFG00000013445	LSG1	99	84.800	ENSGGOG00000000520	LSG1	95	84.800	Gorilla_gorilla
ENSCAFG00000013445	LSG1	100	64.511	ENSHBUG00000005659	lsg1	95	64.013	Haplochromis_burtoni
ENSCAFG00000013445	LSG1	99	75.119	ENSHGLG00000017390	LSG1	95	75.079	Heterocephalus_glaber_female
ENSCAFG00000013445	LSG1	99	75.119	ENSHGLG00100018587	LSG1	95	75.079	Heterocephalus_glaber_male
ENSCAFG00000013445	LSG1	100	64.444	ENSHCOG00000016848	lsg1	95	63.867	Hippocampus_comes
ENSCAFG00000013445	LSG1	100	66.294	ENSIPUG00000008631	lsg1	95	66.294	Ictalurus_punctatus
ENSCAFG00000013445	LSG1	80	76.846	ENSSTOG00000010234	LSG1	92	79.042	Ictidomys_tridecemlineatus
ENSCAFG00000013445	LSG1	99	79.904	ENSJJAG00000015513	Lsg1	95	79.904	Jaculus_jaculus
ENSCAFG00000013445	LSG1	100	64.115	ENSKMAG00000009681	lsg1	95	64.115	Kryptolebias_marmoratus
ENSCAFG00000013445	LSG1	100	65.823	ENSLACG00000013399	LSG1	95	65.610	Latimeria_chalumnae
ENSCAFG00000013445	LSG1	100	65.728	ENSLOCG00000004918	lsg1	95	65.823	Lepisosteus_oculatus
ENSCAFG00000013445	LSG1	99	83.040	ENSLAFG00000012919	-	95	83.040	Loxodonta_africana
ENSCAFG00000013445	LSG1	99	85.280	ENSMFAG00000039903	LSG1	95	83.680	Macaca_fascicularis
ENSCAFG00000013445	LSG1	99	85.280	ENSMMUG00000010708	LSG1	95	85.280	Macaca_mulatta
ENSCAFG00000013445	LSG1	99	84.960	ENSMNEG00000031538	LSG1	95	83.200	Macaca_nemestrina
ENSCAFG00000013445	LSG1	99	85.280	ENSMLEG00000041184	LSG1	95	85.280	Mandrillus_leucophaeus
ENSCAFG00000013445	LSG1	100	63.465	ENSMAMG00000000470	lsg1	95	62.992	Mastacembelus_armatus
ENSCAFG00000013445	LSG1	100	64.388	ENSMZEG00005017865	lsg1	95	64.331	Maylandia_zebra
ENSCAFG00000013445	LSG1	93	64.189	ENSMGAG00000007050	LSG1	99	65.247	Meleagris_gallopavo
ENSCAFG00000013445	LSG1	91	79.049	ENSMAUG00000016976	Lsg1	87	79.754	Mesocricetus_auratus
ENSCAFG00000013445	LSG1	99	82.720	ENSMICG00000049087	LSG1	95	82.720	Microcebus_murinus
ENSCAFG00000013445	LSG1	99	78.822	ENSMOCG00000022136	Lsg1	95	79.173	Microtus_ochrogaster
ENSCAFG00000013445	LSG1	84	75.000	ENSMMOG00000008884	lsg1	90	75.000	Mola_mola
ENSCAFG00000013445	LSG1	100	57.944	ENSMODG00000019828	LSG1	95	57.321	Monodelphis_domestica
ENSCAFG00000013445	LSG1	100	78.914	MGP_CAROLIEiJ_G0020648	Lsg1	95	78.914	Mus_caroli
ENSCAFG00000013445	LSG1	100	79.393	ENSMUSG00000022538	Lsg1	95	79.393	Mus_musculus
ENSCAFG00000013445	LSG1	100	80.192	MGP_PahariEiJ_G0016352	Lsg1	95	80.192	Mus_pahari
ENSCAFG00000013445	LSG1	100	79.712	MGP_SPRETEiJ_G0021544	Lsg1	95	79.712	Mus_spretus
ENSCAFG00000013445	LSG1	100	90.096	ENSMPUG00000003734	LSG1	95	90.096	Mustela_putorius_furo
ENSCAFG00000013445	LSG1	100	85.167	ENSMLUG00000012548	LSG1	95	85.167	Myotis_lucifugus
ENSCAFG00000013445	LSG1	99	79.680	ENSNGAG00000021872	Lsg1	95	78.080	Nannospalax_galili
ENSCAFG00000013445	LSG1	99	85.440	ENSNLEG00000008293	LSG1	95	85.440	Nomascus_leucogenys
ENSCAFG00000013445	LSG1	72	71.134	ENSMEUG00000009041	-	82	71.134	Notamacropus_eugenii
ENSCAFG00000013445	LSG1	100	62.826	ENSONIG00000002635	lsg1	95	63.823	Oreochromis_niloticus
ENSCAFG00000013445	LSG1	100	70.701	ENSOANG00000012742	LSG1	99	69.586	Ornithorhynchus_anatinus
ENSCAFG00000013445	LSG1	99	82.400	ENSOCUG00000004817	LSG1	95	82.400	Oryctolagus_cuniculus
ENSCAFG00000013445	LSG1	100	63.738	ENSORLG00000007695	lsg1	95	63.968	Oryzias_latipes
ENSCAFG00000013445	LSG1	100	63.477	ENSORLG00020016286	lsg1	95	63.009	Oryzias_latipes_hni
ENSCAFG00000013445	LSG1	100	64.856	ENSORLG00015012025	lsg1	95	64.856	Oryzias_latipes_hsok
ENSCAFG00000013445	LSG1	100	62.998	ENSOMEG00000022379	lsg1	95	63.233	Oryzias_melastigma
ENSCAFG00000013445	LSG1	99	84.261	ENSOGAG00000003475	LSG1	95	84.261	Otolemur_garnettii
ENSCAFG00000013445	LSG1	100	82.297	ENSOARG00000020403	LSG1	95	82.297	Ovis_aries
ENSCAFG00000013445	LSG1	99	84.640	ENSPPAG00000029271	LSG1	95	84.640	Pan_paniscus
ENSCAFG00000013445	LSG1	100	88.468	ENSPPRG00000010281	LSG1	95	88.468	Panthera_pardus
ENSCAFG00000013445	LSG1	100	89.297	ENSPTIG00000010789	LSG1	95	89.297	Panthera_tigris_altaica
ENSCAFG00000013445	LSG1	99	84.480	ENSPTRG00000015760	LSG1	95	84.480	Pan_troglodytes
ENSCAFG00000013445	LSG1	99	84.800	ENSPANG00000018249	LSG1	95	83.200	Papio_anubis
ENSCAFG00000013445	LSG1	99	64.490	ENSPKIG00000002895	lsg1	95	63.537	Paramormyrops_kingsleyae
ENSCAFG00000013445	LSG1	100	64.319	ENSPSIG00000009821	LSG1	99	63.693	Pelodiscus_sinensis
ENSCAFG00000013445	LSG1	100	64.184	ENSPMGG00000000931	lsg1	100	63.793	Periophthalmus_magnuspinnatus
ENSCAFG00000013445	LSG1	99	78.822	ENSPEMG00000012082	-	95	78.344	Peromyscus_maniculatus_bairdii
ENSCAFG00000013445	LSG1	99	59.876	ENSPMAG00000007451	lsg1	95	59.876	Petromyzon_marinus
ENSCAFG00000013445	LSG1	100	64.249	ENSPCIG00000013890	LSG1	78	64.249	Phascolarctos_cinereus
ENSCAFG00000013445	LSG1	99	65.974	ENSPFOG00000021882	lsg1	95	66.029	Poecilia_formosa
ENSCAFG00000013445	LSG1	99	64.252	ENSPLAG00000019536	lsg1	95	65.391	Poecilia_latipinna
ENSCAFG00000013445	LSG1	99	65.127	ENSPMEG00000017281	lsg1	95	65.183	Poecilia_mexicana
ENSCAFG00000013445	LSG1	99	54.334	ENSPREG00000006048	lsg1	94	55.172	Poecilia_reticulata
ENSCAFG00000013445	LSG1	92	83.652	ENSPPYG00000014425	LSG1	95	83.652	Pongo_abelii
ENSCAFG00000013445	LSG1	89	95.238	ENSPCAG00000005511	LSG1	85	95.238	Procavia_capensis
ENSCAFG00000013445	LSG1	99	84.160	ENSPCOG00000012360	LSG1	95	84.160	Propithecus_coquereli
ENSCAFG00000013445	LSG1	100	64.577	ENSPNYG00000021994	lsg1	95	64.107	Pundamilia_nyererei
ENSCAFG00000013445	LSG1	100	66.032	ENSPNAG00000015533	lsg1	95	65.764	Pygocentrus_nattereri
ENSCAFG00000013445	LSG1	100	79.524	ENSRNOG00000001727	Lsg1	95	79.524	Rattus_norvegicus
ENSCAFG00000013445	LSG1	99	83.840	ENSRBIG00000029053	LSG1	95	83.840	Rhinopithecus_bieti
ENSCAFG00000013445	LSG1	99	83.840	ENSRROG00000037702	LSG1	95	83.840	Rhinopithecus_roxellana
ENSCAFG00000013445	LSG1	64	56.886	YGL099W	LSG1	64	56.886	Saccharomyces_cerevisiae
ENSCAFG00000013445	LSG1	99	85.440	ENSSBOG00000034938	LSG1	95	85.440	Saimiri_boliviensis_boliviensis
ENSCAFG00000013445	LSG1	82	64.516	ENSSHAG00000003487	LSG1	100	64.137	Sarcophilus_harrisii
ENSCAFG00000013445	LSG1	100	64.678	ENSSFOG00015008955	lsg1	95	64.557	Scleropages_formosus
ENSCAFG00000013445	LSG1	100	65.523	ENSSDUG00000004622	lsg1	95	64.890	Seriola_dumerili
ENSCAFG00000013445	LSG1	100	65.397	ENSSLDG00000010869	lsg1	95	65.495	Seriola_lalandi_dorsalis
ENSCAFG00000013445	LSG1	73	90.435	ENSSARG00000012981	LSG1	69	90.435	Sorex_araneus
ENSCAFG00000013445	LSG1	100	68.088	ENSSPUG00000016347	LSG1	95	67.615	Sphenodon_punctatus
ENSCAFG00000013445	LSG1	100	58.898	ENSSPAG00000005508	lsg1	95	65.501	Stegastes_partitus
ENSCAFG00000013445	LSG1	100	82.907	ENSSSCG00000011827	LSG1	95	82.907	Sus_scrofa
ENSCAFG00000013445	LSG1	94	63.423	ENSTGUG00000009068	LSG1	100	62.396	Taeniopygia_guttata
ENSCAFG00000013445	LSG1	100	61.331	ENSTRUG00000017380	lsg1	95	61.807	Takifugu_rubripes
ENSCAFG00000013445	LSG1	100	65.348	ENSTNIG00000015570	lsg1	95	65.665	Tetraodon_nigroviridis
ENSCAFG00000013445	LSG1	100	75.279	ENSTTRG00000000559	LSG1	95	75.279	Tursiops_truncatus
ENSCAFG00000013445	LSG1	100	89.457	ENSUAMG00000012454	LSG1	95	89.457	Ursus_americanus
ENSCAFG00000013445	LSG1	100	89.457	ENSUMAG00000000855	LSG1	95	89.457	Ursus_maritimus
ENSCAFG00000013445	LSG1	100	79.553	ENSVPAG00000012400	LSG1	100	79.553	Vicugna_pacos
ENSCAFG00000013445	LSG1	100	97.604	ENSVVUG00000008956	LSG1	97	97.604	Vulpes_vulpes
ENSCAFG00000013445	LSG1	100	64.780	ENSXETG00000003451	lsg1	95	64.771	Xenopus_tropicalis
ENSCAFG00000013445	LSG1	99	64.753	ENSXCOG00000003239	lsg1	95	64.912	Xiphophorus_couchianus
ENSCAFG00000013445	LSG1	99	63.793	ENSXMAG00000005536	lsg1	95	64.209	Xiphophorus_maculatus