EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000013537 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 53898 bases
Position: chr6:7426564-7480461
Accession: 607984
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000036064	cwf21	PF08312.12	4.9e-13	1	1
ENSCAFP00000019939	cwf21	PF08312.12	5.4e-13	1	1
ENSCAFP00000036664	cwf21	PF08312.12	6.3e-13	1	1
ENSCAFP00000019939	SRRM_C	PF15230.6	1.7e-24	1	1
ENSCAFP00000036064	SRRM_C	PF15230.6	1.2e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000047640	SRRM3-203	1530	XM_005621014	ENSCAFP00000036664	395 (aa)	-	J9NU27
ENSCAFT00000021471	SRRM3-201	2292	-	ENSCAFP00000019939	649 (aa)	-	F6Y120
ENSCAFT00000043187	SRRM3-202	2151	-	ENSCAFP00000036064	602 (aa)	-	J9JHY3

Gene Model

Click here to download ENSCAFG00000013537's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000013537's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000013537	SRRM3	73	92.388	ENSG00000177679	SRRM3	95	79.936	Homo_sapiens
ENSCAFG00000013537	SRRM3	78	63.259	ENSACAG00000000452	SRRM3	51	64.828	Anolis_carolinensis
ENSCAFG00000013537	SRRM3	73	83.729	ENSANAG00000031983	SRRM3	55	83.862	Aotus_nancymaae
ENSCAFG00000013537	SRRM3	83	84.663	ENSBTAG00000007879	-	99	86.391	Bos_taurus
ENSCAFG00000013537	SRRM3	73	94.464	ENSCJAG00000016307	SRRM3	95	81.059	Callithrix_jacchus
ENSCAFG00000013537	SRRM3	73	81.661	ENSCAFG00020013073	SRRM3	92	82.029	Canis_lupus_dingo
ENSCAFG00000013537	SRRM3	73	76.817	ENSCHIG00000014018	SRRM3	97	69.931	Capra_hircus
ENSCAFG00000013537	SRRM3	73	76.871	ENSCPOG00000038685	SRRM3	95	72.468	Cavia_porcellus
ENSCAFG00000013537	SRRM3	73	95.156	ENSCCAG00000033359	SRRM3	95	81.541	Cebus_capucinus
ENSCAFG00000013537	SRRM3	79	92.896	ENSCATG00000043129	SRRM3	57	86.707	Cercocebus_atys
ENSCAFG00000013537	SRRM3	79	90.774	ENSCLAG00000007682	SRRM3	100	91.935	Chinchilla_lanigera
ENSCAFG00000013537	SRRM3	73	93.772	ENSCSAG00000018140	SRRM3	97	79.210	Chlorocebus_sabaeus
ENSCAFG00000013537	SRRM3	80	64.907	ENSCPBG00000027784	SRRM3	90	53.833	Chrysemys_picta_bellii
ENSCAFG00000013537	SRRM3	73	89.619	ENSCGRG00001011385	Srrm3	95	78.675	Cricetulus_griseus_chok1gshd
ENSCAFG00000013537	SRRM3	89	67.330	ENSDNOG00000046922	SRRM3	90	65.657	Dasypus_novemcinctus
ENSCAFG00000013537	SRRM3	73	95.848	ENSEASG00005016840	-	89	95.238	Equus_asinus_asinus
ENSCAFG00000013537	SRRM3	73	95.502	ENSECAG00000022142	-	89	95.224	Equus_caballus
ENSCAFG00000013537	SRRM3	73	96.540	ENSFCAG00000044112	SRRM3	95	83.306	Felis_catus
ENSCAFG00000013537	SRRM3	56	62.445	ENSFDAG00000016913	SRRM3	100	93.827	Fukomys_damarensis
ENSCAFG00000013537	SRRM3	72	67.586	ENSGALG00000001932	SRRM3	65	68.276	Gallus_gallus
ENSCAFG00000013537	SRRM3	64	78.788	ENSGGOG00000036497	-	89	68.293	Gorilla_gorilla
ENSCAFG00000013537	SRRM3	55	69.940	ENSHGLG00000015576	SRRM3	100	91.935	Heterocephalus_glaber_female
ENSCAFG00000013537	SRRM3	82	90.154	ENSSTOG00000014181	SRRM3	100	92.742	Ictidomys_tridecemlineatus
ENSCAFG00000013537	SRRM3	82	78.769	ENSJJAG00000023441	Srrm3	95	73.836	Jaculus_jaculus
ENSCAFG00000013537	SRRM3	71	55.822	ENSLOCG00000002879	SRRM3	59	58.685	Lepisosteus_oculatus
ENSCAFG00000013537	SRRM3	72	67.474	ENSMGAG00000003690	SRRM3	75	67.708	Meleagris_gallopavo
ENSCAFG00000013537	SRRM3	89	77.015	ENSMAUG00000017613	Srrm3	100	89.516	Mesocricetus_auratus
ENSCAFG00000013537	SRRM3	83	92.331	ENSMICG00000010668	SRRM3	57	93.472	Microcebus_murinus
ENSCAFG00000013537	SRRM3	73	88.927	ENSMOCG00000002565	Srrm3	95	78.837	Microtus_ochrogaster
ENSCAFG00000013537	SRRM3	73	89.619	MGP_CAROLIEiJ_G0027845	-	99	89.181	Mus_caroli
ENSCAFG00000013537	SRRM3	73	89.965	ENSMUSG00000039860	Srrm3	100	91.129	Mus_musculus
ENSCAFG00000013537	SRRM3	73	88.927	MGP_PahariEiJ_G0024425	Srrm3	100	90.323	Mus_pahari
ENSCAFG00000013537	SRRM3	73	90.311	MGP_SPRETEiJ_G0028844	Srrm3	100	91.935	Mus_spretus
ENSCAFG00000013537	SRRM3	97	68.976	ENSNLEG00000008423	-	94	66.029	Nomascus_leucogenys
ENSCAFG00000013537	SRRM3	73	89.619	ENSODEG00000015988	SRRM3	95	77.814	Octodon_degus
ENSCAFG00000013537	SRRM3	89	41.667	ENSONIG00000012732	-	51	54.392	Oreochromis_niloticus
ENSCAFG00000013537	SRRM3	83	89.024	ENSOGAG00000030805	SRRM3	95	78.744	Otolemur_garnettii
ENSCAFG00000013537	SRRM3	70	82.746	ENSOARG00000013722	SRRM3	53	80.966	Ovis_aries
ENSCAFG00000013537	SRRM3	65	93.548	ENSPPRG00000006254	SRRM3	72	90.217	Panthera_pardus
ENSCAFG00000013537	SRRM3	73	93.080	ENSPTRG00000019317	SRRM3	95	80.578	Pan_troglodytes
ENSCAFG00000013537	SRRM3	88	49.144	ENSPKIG00000017233	SRRM3	91	46.599	Paramormyrops_kingsleyae
ENSCAFG00000013537	SRRM3	96	48.908	ENSPSIG00000007850	SRRM3	55	58.824	Pelodiscus_sinensis
ENSCAFG00000013537	SRRM3	76	79.839	ENSPCAG00000013700	SRRM3	77	80.992	Procavia_capensis
ENSCAFG00000013537	SRRM3	83	89.877	ENSPCOG00000028464	SRRM3	95	79.073	Propithecus_coquereli
ENSCAFG00000013537	SRRM3	73	89.273	ENSRNOG00000001439	Srrm3	95	79.645	Rattus_norvegicus
ENSCAFG00000013537	SRRM3	75	93.960	ENSRROG00000034980	SRRM3	87	94.656	Rhinopithecus_roxellana
ENSCAFG00000013537	SRRM3	57	77.570	ENSSPUG00000006285	SRRM3	74	76.364	Sphenodon_punctatus
ENSCAFG00000013537	SRRM3	66	86.066	ENSTTRG00000014836	-	67	86.066	Tursiops_truncatus