EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000013543 (Gene tree)
Gene ID: 490316
Gene Symbol: SWT1
Alias: -
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 90584 bases
Position: chr7:18333571-18424154
Accession: 47011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000019947	PIN_4	PF13638.6	3.2e-27	1	1
ENSCAFP00000039134	PIN_4	PF13638.6	3.4e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000021480	-	2619	XM_005622440	ENSCAFP00000019947	869 (aa)	XP_005622497	F1PYE0
ENSCAFT00000050159	-	2748	XM_005622435	ENSCAFP00000039134	915 (aa)	XP_005622492	J9P0R1

Gene Model

Click here to download ENSCAFG00000013543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000013543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000013543	SWT1	99	79.051	ENSG00000116668	SWT1	99	79.558	Homo_sapiens
ENSCAFG00000013543	SWT1	60	34.043	ENSAPOG00000014897	-	58	34.247	Acanthochromis_polyacanthus
ENSCAFG00000013543	SWT1	99	87.791	ENSAMEG00000013585	SWT1	100	87.694	Ailuropoda_melanoleuca
ENSCAFG00000013543	SWT1	60	34.397	ENSAOCG00000013932	swt1	58	34.589	Amphiprion_ocellaris
ENSCAFG00000013543	SWT1	60	34.220	ENSAPEG00000009613	-	58	34.418	Amphiprion_percula
ENSCAFG00000013543	SWT1	60	34.938	ENSATEG00000018946	swt1	57	35.112	Anabas_testudineus
ENSCAFG00000013543	SWT1	77	50.070	ENSAPLG00000008607	SWT1	99	49.388	Anas_platyrhynchos
ENSCAFG00000013543	SWT1	63	47.684	ENSACAG00000002276	SWT1	67	47.684	Anolis_carolinensis
ENSCAFG00000013543	SWT1	99	78.356	ENSANAG00000027068	SWT1	99	79.006	Aotus_nancymaae
ENSCAFG00000013543	SWT1	62	33.565	ENSACLG00000009742	swt1	68	33.391	Astatotilapia_calliptera
ENSCAFG00000013543	SWT1	64	39.189	ENSAMXG00000010971	swt1	60	38.758	Astyanax_mexicanus
ENSCAFG00000013543	SWT1	74	74.383	ENSBTAG00000004492	SWT1	100	76.682	Bos_taurus
ENSCAFG00000013543	SWT1	99	76.736	ENSCJAG00000005544	SWT1	100	77.815	Callithrix_jacchus
ENSCAFG00000013543	SWT1	99	97.451	ENSCAFG00020015648	SWT1	99	99.527	Canis_lupus_dingo
ENSCAFG00000013543	SWT1	90	81.481	ENSCHIG00000023511	SWT1	100	87.648	Capra_hircus
ENSCAFG00000013543	SWT1	99	78.125	ENSTSYG00000010470	SWT1	100	78.698	Carlito_syrichta
ENSCAFG00000013543	SWT1	96	74.762	ENSCPOG00000014251	SWT1	100	74.880	Cavia_porcellus
ENSCAFG00000013543	SWT1	99	78.356	ENSCCAG00000033926	SWT1	99	79.006	Cebus_capucinus
ENSCAFG00000013543	SWT1	99	79.354	ENSCATG00000042210	SWT1	99	87.053	Cercocebus_atys
ENSCAFG00000013543	SWT1	99	75.145	ENSCLAG00000013959	SWT1	99	75.615	Chinchilla_lanigera
ENSCAFG00000013543	SWT1	99	78.777	ENSCSAG00000012895	SWT1	99	79.515	Chlorocebus_sabaeus
ENSCAFG00000013543	SWT1	64	87.500	ENSCHOG00000002211	-	64	87.500	Choloepus_hoffmanni
ENSCAFG00000013543	SWT1	93	46.927	ENSCPBG00000015691	SWT1	95	48.558	Chrysemys_picta_bellii
ENSCAFG00000013543	SWT1	99	79.398	ENSCANG00000032207	SWT1	99	86.815	Colobus_angolensis_palliatus
ENSCAFG00000013543	SWT1	98	72.506	ENSCGRG00001022955	Swt1	100	70.222	Cricetulus_griseus_chok1gshd
ENSCAFG00000013543	SWT1	98	72.556	ENSCGRG00000010224	Swt1	100	72.222	Cricetulus_griseus_crigri
ENSCAFG00000013543	SWT1	61	34.615	ENSCSEG00000017352	swt1	75	34.003	Cynoglossus_semilaevis
ENSCAFG00000013543	SWT1	61	39.106	ENSDARG00000094010	swt1	57	38.947	Danio_rerio
ENSCAFG00000013543	SWT1	93	74.186	ENSDNOG00000005254	SWT1	100	74.186	Dasypus_novemcinctus
ENSCAFG00000013543	SWT1	99	71.163	ENSDORG00000010531	Swt1	95	78.234	Dipodomys_ordii
ENSCAFG00000013543	SWT1	89	80.873	ENSEASG00005005530	SWT1	97	80.873	Equus_asinus_asinus
ENSCAFG00000013543	SWT1	90	79.759	ENSECAG00000012085	SWT1	99	79.736	Equus_caballus
ENSCAFG00000013543	SWT1	83	86.207	ENSEEUG00000003664	SWT1	88	86.207	Erinaceus_europaeus
ENSCAFG00000013543	SWT1	63	35.889	ENSELUG00000020565	swt1	57	36.457	Esox_lucius
ENSCAFG00000013543	SWT1	99	86.543	ENSFCAG00000011286	SWT1	100	86.726	Felis_catus
ENSCAFG00000013543	SWT1	63	52.640	ENSFALG00000003206	SWT1	67	52.640	Ficedula_albicollis
ENSCAFG00000013543	SWT1	99	73.898	ENSFDAG00000007569	SWT1	100	74.333	Fukomys_damarensis
ENSCAFG00000013543	SWT1	63	54.932	ENSGALG00000034230	SWT1	67	55.102	Gallus_gallus
ENSCAFG00000013543	SWT1	73	30.769	ENSGAFG00000007803	-	68	31.034	Gambusia_affinis
ENSCAFG00000013543	SWT1	87	48.631	ENSGAGG00000025050	SWT1	99	58.549	Gopherus_agassizii
ENSCAFG00000013543	SWT1	57	86.450	ENSGGOG00000041167	-	95	86.450	Gorilla_gorilla
ENSCAFG00000013543	SWT1	62	33.391	ENSHBUG00000006188	swt1	68	33.277	Haplochromis_burtoni
ENSCAFG00000013543	SWT1	99	74.040	ENSHGLG00000006542	SWT1	99	74.746	Heterocephalus_glaber_female
ENSCAFG00000013543	SWT1	99	76.074	ENSHGLG00100014408	SWT1	99	76.603	Heterocephalus_glaber_male
ENSCAFG00000013543	SWT1	62	36.379	ENSIPUG00000009113	-	58	36.379	Ictalurus_punctatus
ENSCAFG00000013543	SWT1	98	76.915	ENSSTOG00000010356	SWT1	100	77.248	Ictidomys_tridecemlineatus
ENSCAFG00000013543	SWT1	99	67.404	ENSJJAG00000015927	Swt1	100	68.116	Jaculus_jaculus
ENSCAFG00000013543	SWT1	61	33.510	ENSKMAG00000012533	swt1	58	33.731	Kryptolebias_marmoratus
ENSCAFG00000013543	SWT1	62	35.284	ENSLBEG00000020663	-	59	35.833	Labrus_bergylta
ENSCAFG00000013543	SWT1	74	47.489	ENSLACG00000009194	SWT1	96	49.110	Latimeria_chalumnae
ENSCAFG00000013543	SWT1	63	41.815	ENSLOCG00000001749	swt1	99	41.241	Lepisosteus_oculatus
ENSCAFG00000013543	SWT1	64	88.776	ENSLAFG00000004346	-	100	88.776	Loxodonta_africana
ENSCAFG00000013543	SWT1	99	78.662	ENSMFAG00000031793	SWT1	99	86.325	Macaca_fascicularis
ENSCAFG00000013543	SWT1	99	76.686	ENSMMUG00000013882	SWT1	99	83.849	Macaca_mulatta
ENSCAFG00000013543	SWT1	99	78.777	ENSMNEG00000035502	SWT1	99	86.154	Macaca_nemestrina
ENSCAFG00000013543	SWT1	99	79.630	ENSMLEG00000038692	SWT1	99	87.053	Mandrillus_leucophaeus
ENSCAFG00000013543	SWT1	62	33.565	ENSMZEG00005018489	swt1	68	33.445	Maylandia_zebra
ENSCAFG00000013543	SWT1	63	53.500	ENSMGAG00000000973	SWT1	100	53.500	Meleagris_gallopavo
ENSCAFG00000013543	SWT1	98	66.297	ENSMAUG00000007996	Swt1	98	65.965	Mesocricetus_auratus
ENSCAFG00000013543	SWT1	99	80.556	ENSMICG00000014975	SWT1	100	80.464	Microcebus_murinus
ENSCAFG00000013543	SWT1	99	69.686	ENSMOCG00000009776	Swt1	99	69.608	Microtus_ochrogaster
ENSCAFG00000013543	SWT1	99	59.524	ENSMODG00000007472	SWT1	99	60.152	Monodelphis_domestica
ENSCAFG00000013543	SWT1	60	35.584	ENSMALG00000019308	swt1	57	35.739	Monopterus_albus
ENSCAFG00000013543	SWT1	99	68.561	MGP_CAROLIEiJ_G0014692	Swt1	99	70.189	Mus_caroli
ENSCAFG00000013543	SWT1	99	67.517	ENSMUSG00000052748	Swt1	99	68.192	Mus_musculus
ENSCAFG00000013543	SWT1	99	70.185	MGP_PahariEiJ_G0027928	Swt1	99	70.620	Mus_pahari
ENSCAFG00000013543	SWT1	99	68.329	MGP_SPRETEiJ_G0015499	Swt1	99	68.954	Mus_spretus
ENSCAFG00000013543	SWT1	99	87.209	ENSMPUG00000011913	SWT1	100	86.585	Mustela_putorius_furo
ENSCAFG00000013543	SWT1	98	77.716	ENSMLUG00000001142	SWT1	98	78.381	Myotis_lucifugus
ENSCAFG00000013543	SWT1	98	73.333	ENSNGAG00000021080	Swt1	98	73.444	Nannospalax_galili
ENSCAFG00000013543	SWT1	99	78.472	ENSNLEG00000018031	SWT1	99	79.227	Nomascus_leucogenys
ENSCAFG00000013543	SWT1	98	46.086	ENSMEUG00000000236	-	99	46.417	Notamacropus_eugenii
ENSCAFG00000013543	SWT1	88	66.150	ENSOPRG00000000692	SWT1	88	67.308	Ochotona_princeps
ENSCAFG00000013543	SWT1	62	34.926	ENSONIG00000009994	swt1	99	34.783	Oreochromis_niloticus
ENSCAFG00000013543	SWT1	85	56.538	ENSOANG00000001013	-	100	57.019	Ornithorhynchus_anatinus
ENSCAFG00000013543	SWT1	99	69.293	ENSOCUG00000004901	SWT1	99	69.019	Oryctolagus_cuniculus
ENSCAFG00000013543	SWT1	60	32.920	ENSORLG00000009682	swt1	58	33.162	Oryzias_latipes
ENSCAFG00000013543	SWT1	60	33.037	ENSORLG00020011654	swt1	59	33.276	Oryzias_latipes_hni
ENSCAFG00000013543	SWT1	60	32.920	ENSORLG00015007734	swt1	59	33.162	Oryzias_latipes_hsok
ENSCAFG00000013543	SWT1	60	35.420	ENSOMEG00000006607	swt1	57	35.579	Oryzias_melastigma
ENSCAFG00000013543	SWT1	99	78.140	ENSOGAG00000016195	SWT1	100	78.381	Otolemur_garnettii
ENSCAFG00000013543	SWT1	100	80.911	ENSOARG00000004156	SWT1	100	80.911	Ovis_aries
ENSCAFG00000013543	SWT1	99	78.819	ENSPPAG00000021400	SWT1	99	79.337	Pan_paniscus
ENSCAFG00000013543	SWT1	99	87.239	ENSPPRG00000023754	SWT1	100	87.500	Panthera_pardus
ENSCAFG00000013543	SWT1	99	87.239	ENSPTIG00000021889	SWT1	100	87.389	Panthera_tigris_altaica
ENSCAFG00000013543	SWT1	99	78.819	ENSPTRG00000001777	SWT1	99	79.337	Pan_troglodytes
ENSCAFG00000013543	SWT1	99	78.777	ENSPANG00000005099	SWT1	99	86.542	Papio_anubis
ENSCAFG00000013543	SWT1	61	36.920	ENSPKIG00000005979	swt1	59	36.189	Paramormyrops_kingsleyae
ENSCAFG00000013543	SWT1	95	46.550	ENSPSIG00000008961	SWT1	94	47.520	Pelodiscus_sinensis
ENSCAFG00000013543	SWT1	99	70.511	ENSPEMG00000008208	Swt1	99	70.185	Peromyscus_maniculatus_bairdii
ENSCAFG00000013543	SWT1	100	59.358	ENSPCIG00000002443	SWT1	99	72.519	Phascolarctos_cinereus
ENSCAFG00000013543	SWT1	61	33.841	ENSPFOG00000010988	-	69	33.828	Poecilia_formosa
ENSCAFG00000013543	SWT1	61	33.388	ENSPLAG00000022908	-	58	33.673	Poecilia_latipinna
ENSCAFG00000013543	SWT1	73	31.471	ENSPMEG00000006943	-	68	31.857	Poecilia_mexicana
ENSCAFG00000013543	SWT1	99	78.356	ENSPPYG00000000415	SWT1	99	79.227	Pongo_abelii
ENSCAFG00000013543	SWT1	98	64.751	ENSPCAG00000008337	SWT1	99	64.751	Procavia_capensis
ENSCAFG00000013543	SWT1	69	89.011	ENSPCOG00000018195	-	96	89.011	Propithecus_coquereli
ENSCAFG00000013543	SWT1	85	81.487	ENSPVAG00000005968	SWT1	88	81.717	Pteropus_vampyrus
ENSCAFG00000013543	SWT1	62	33.565	ENSPNYG00000012934	swt1	68	33.445	Pundamilia_nyererei
ENSCAFG00000013543	SWT1	64	36.816	ENSPNAG00000017795	swt1	61	37.793	Pygocentrus_nattereri
ENSCAFG00000013543	SWT1	99	69.827	ENSRNOG00000032258	Swt1	99	70.174	Rattus_norvegicus
ENSCAFG00000013543	SWT1	99	75.810	ENSRBIG00000040630	SWT1	99	83.562	Rhinopithecus_bieti
ENSCAFG00000013543	SWT1	72	77.323	ENSRROG00000028596	SWT1	100	77.953	Rhinopithecus_roxellana
ENSCAFG00000013543	SWT1	99	78.637	ENSSBOG00000028825	SWT1	99	79.208	Saimiri_boliviensis_boliviensis
ENSCAFG00000013543	SWT1	98	61.015	ENSSHAG00000009241	SWT1	99	60.799	Sarcophilus_harrisii
ENSCAFG00000013543	SWT1	61	39.925	ENSSFOG00015004895	swt1	57	39.367	Scleropages_formosus
ENSCAFG00000013543	SWT1	60	34.164	ENSSDUG00000012345	swt1	58	34.364	Seriola_dumerili
ENSCAFG00000013543	SWT1	60	33.986	ENSSLDG00000003821	swt1	58	34.192	Seriola_lalandi_dorsalis
ENSCAFG00000013543	SWT1	60	50.000	ENSSARG00000011524	-	99	50.000	Sorex_araneus
ENSCAFG00000013543	SWT1	77	49.727	ENSSPUG00000003899	SWT1	81	49.661	Sphenodon_punctatus
ENSCAFG00000013543	SWT1	60	32.447	ENSSPAG00000001030	swt1	59	32.323	Stegastes_partitus
ENSCAFG00000013543	SWT1	99	83.120	ENSSSCG00000015569	SWT1	100	83.499	Sus_scrofa
ENSCAFG00000013543	SWT1	61	53.309	ENSTGUG00000003718	-	100	53.309	Taeniopygia_guttata
ENSCAFG00000013543	SWT1	60	34.854	ENSTRUG00000006420	swt1	61	34.790	Takifugu_rubripes
ENSCAFG00000013543	SWT1	52	93.548	ENSTBEG00000016891	-	54	93.548	Tupaia_belangeri
ENSCAFG00000013543	SWT1	99	78.331	ENSTTRG00000005914	SWT1	100	78.343	Tursiops_truncatus
ENSCAFG00000013543	SWT1	99	87.209	ENSUAMG00000020937	SWT1	99	89.333	Ursus_americanus
ENSCAFG00000013543	SWT1	99	88.023	ENSUMAG00000021918	SWT1	100	88.027	Ursus_maritimus
ENSCAFG00000013543	SWT1	90	88.652	ENSVPAG00000011855	SWT1	92	88.652	Vicugna_pacos
ENSCAFG00000013543	SWT1	99	98.598	ENSVVUG00000009182	SWT1	100	98.218	Vulpes_vulpes
ENSCAFG00000013543	SWT1	64	32.432	ENSXMAG00000023472	-	62	32.528	Xiphophorus_maculatus