EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000013776 (Gene tree)
Gene ID: 612801
Gene Symbol: DDX50
Alias: -
Full Name: DExD-box helicase 50
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 64640 bases
Position: chr4:20073136-20137775
Accession: 39863
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000033709	GUCT	PF08152.12	5.1e-28	1	1
ENSCAFP00000020312	GUCT	PF08152.12	5.9e-28	1	1
ENSCAFP00000033709	ResIII	PF04851.15	2.6e-10	1	1
ENSCAFP00000020312	ResIII	PF04851.15	3.1e-10	1	1
ENSCAFP00000033709	DEAD	PF00270.29	1.3e-47	1	1
ENSCAFP00000020312	DEAD	PF00270.29	1.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000021867	-	2214	XM_005618959	ENSCAFP00000020312	738 (aa)	XP_005619016	E2QTT0
ENSCAFT00000038045	-	2061	-	ENSCAFP00000033709	687 (aa)	-	E2RPT4

Gene Model

Click here to download ENSCAFG00000013776's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000013776's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000013776	DDX50	60	31.026	ENSCAFG00000013224	DDX47	77	31.877
ENSCAFG00000013776	DDX50	53	32.533	ENSCAFG00000016632	EIF4A1	88	32.533
ENSCAFG00000013776	DDX50	52	33.241	ENSCAFG00000011713	DDX5	52	33.241
ENSCAFG00000013776	DDX50	87	64.715	ENSCAFG00000013791	DDX21	75	67.116
ENSCAFG00000013776	DDX50	52	30.495	ENSCAFG00000012442	DDX6	71	30.495
ENSCAFG00000013776	DDX50	53	32.533	ENSCAFG00000004690	-	88	31.989
ENSCAFG00000013776	DDX50	54	32.800	ENSCAFG00000005614	EIF4A3	86	32.888
ENSCAFG00000013776	DDX50	53	31.536	ENSCAFG00000013659	EIF4A2	87	31.536
ENSCAFG00000013776	DDX50	59	33.099	ENSCAFG00000011384	DDX27	52	33.099
ENSCAFG00000013776	DDX50	52	32.603	ENSCAFG00000016304	DDX41	57	32.603
ENSCAFG00000013776	DDX50	65	32.328	ENSCAFG00000004950	DDX18	54	34.667
ENSCAFG00000013776	DDX50	53	34.146	ENSCAFG00000001395	DDX17	55	34.146

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000013776	DDX50	100	97.832	ENSG00000107625	DDX50	100	97.832	Homo_sapiens
ENSCAFG00000013776	DDX50	100	98.916	ENSAMEG00000017992	DDX50	100	98.916	Ailuropoda_melanoleuca
ENSCAFG00000013776	DDX50	99	77.601	ENSANAG00000017785	-	92	77.730	Aotus_nancymaae
ENSCAFG00000013776	DDX50	100	97.561	ENSBTAG00000033413	DDX50	100	97.561	Bos_taurus
ENSCAFG00000013776	DDX50	100	97.967	ENSCJAG00000018844	DDX50	100	97.967	Callithrix_jacchus
ENSCAFG00000013776	DDX50	100	100.000	ENSCAFG00020025977	DDX50	99	100.000	Canis_lupus_dingo
ENSCAFG00000013776	DDX50	100	97.234	ENSCHIG00000000285	DDX50	99	97.154	Capra_hircus
ENSCAFG00000013776	DDX50	100	97.154	ENSTSYG00000004192	DDX50	100	97.154	Carlito_syrichta
ENSCAFG00000013776	DDX50	94	78.825	ENSCAPG00000007230	-	88	78.779	Cavia_aperea
ENSCAFG00000013776	DDX50	100	95.935	ENSCPOG00000002131	-	100	95.935	Cavia_porcellus
ENSCAFG00000013776	DDX50	88	95.699	ENSCCAG00000030543	DDX50	91	87.647	Cebus_capucinus
ENSCAFG00000013776	DDX50	99	95.522	ENSCATG00000032463	DDX50	99	95.522	Cercocebus_atys
ENSCAFG00000013776	DDX50	99	66.127	ENSCATG00000039259	-	90	67.493	Cercocebus_atys
ENSCAFG00000013776	DDX50	99	73.295	ENSCATG00000035153	-	91	88.957	Cercocebus_atys
ENSCAFG00000013776	DDX50	50	87.263	ENSCLAG00000001553	-	81	88.013	Chinchilla_lanigera
ENSCAFG00000013776	DDX50	100	97.290	ENSCLAG00000012957	-	100	97.290	Chinchilla_lanigera
ENSCAFG00000013776	DDX50	97	71.130	ENSCLAG00000001938	-	92	72.054	Chinchilla_lanigera
ENSCAFG00000013776	DDX50	100	97.967	ENSCSAG00000007703	DDX50	100	97.967	Chlorocebus_sabaeus
ENSCAFG00000013776	DDX50	96	95.129	ENSCHOG00000000233	DDX50	100	95.202	Choloepus_hoffmanni
ENSCAFG00000013776	DDX50	86	72.397	ENSCANG00000018820	-	90	73.024	Colobus_angolensis_palliatus
ENSCAFG00000013776	DDX50	100	84.011	ENSCANG00000036450	-	100	84.011	Colobus_angolensis_palliatus
ENSCAFG00000013776	DDX50	99	69.186	ENSCANG00000028077	-	92	68.314	Colobus_angolensis_palliatus
ENSCAFG00000013776	DDX50	99	95.140	ENSCGRG00001020223	Ddx50	93	95.022	Cricetulus_griseus_chok1gshd
ENSCAFG00000013776	DDX50	98	95.266	ENSCGRG00000015884	Ddx50	93	95.015	Cricetulus_griseus_crigri
ENSCAFG00000013776	DDX50	94	89.676	ENSDNOG00000001675	DDX50	100	89.676	Dasypus_novemcinctus
ENSCAFG00000013776	DDX50	99	96.171	ENSDORG00000007310	Ddx50	93	96.193	Dipodomys_ordii
ENSCAFG00000013776	DDX50	90	97.566	ENSETEG00000014069	DDX50	90	97.566	Echinops_telfairi
ENSCAFG00000013776	DDX50	100	97.832	ENSEASG00005015595	DDX50	99	97.832	Equus_asinus_asinus
ENSCAFG00000013776	DDX50	100	97.967	ENSECAG00000023044	DDX50	99	97.967	Equus_caballus
ENSCAFG00000013776	DDX50	89	96.552	ENSEEUG00000005782	DDX50	82	98.249	Erinaceus_europaeus
ENSCAFG00000013776	DDX50	100	99.322	ENSFCAG00000012678	DDX50	99	99.322	Felis_catus
ENSCAFG00000013776	DDX50	99	89.102	ENSFDAG00000016109	-	92	89.165	Fukomys_damarensis
ENSCAFG00000013776	DDX50	51	82.275	ENSGGOG00000041063	-	84	84.663	Gorilla_gorilla
ENSCAFG00000013776	DDX50	100	97.832	ENSGGOG00000010100	DDX50	99	99.198	Gorilla_gorilla
ENSCAFG00000013776	DDX50	52	71.094	ENSGGOG00000022568	-	93	78.313	Gorilla_gorilla
ENSCAFG00000013776	DDX50	99	94.993	ENSHGLG00000013466	DDX50	93	95.022	Heterocephalus_glaber_female
ENSCAFG00000013776	DDX50	88	88.298	ENSHGLG00100006568	-	93	88.542	Heterocephalus_glaber_male
ENSCAFG00000013776	DDX50	99	94.993	ENSHGLG00100017191	DDX50	93	95.022	Heterocephalus_glaber_male
ENSCAFG00000013776	DDX50	100	95.129	ENSSTOG00000021852	-	100	94.858	Ictidomys_tridecemlineatus
ENSCAFG00000013776	DDX50	100	73.046	ENSJJAG00000019626	-	91	73.574	Jaculus_jaculus
ENSCAFG00000013776	DDX50	100	94.444	ENSJJAG00000023928	-	93	94.436	Jaculus_jaculus
ENSCAFG00000013776	DDX50	100	96.883	ENSLAFG00000006186	DDX50	100	96.883	Loxodonta_africana
ENSCAFG00000013776	DDX50	100	97.967	ENSMFAG00000044067	DDX50	100	97.967	Macaca_fascicularis
ENSCAFG00000013776	DDX50	99	72.424	ENSMFAG00000045339	-	91	88.037	Macaca_fascicularis
ENSCAFG00000013776	DDX50	88	67.388	ENSMMUG00000045343	-	81	68.350	Macaca_mulatta
ENSCAFG00000013776	DDX50	100	97.967	ENSMMUG00000001006	DDX50	100	98.960	Macaca_mulatta
ENSCAFG00000013776	DDX50	99	91.016	ENSMNEG00000031664	DDX50	93	90.816	Macaca_nemestrina
ENSCAFG00000013776	DDX50	99	73.391	ENSMNEG00000045530	-	93	87.688	Macaca_nemestrina
ENSCAFG00000013776	DDX50	87	87.468	ENSMLEG00000041988	-	90	87.468	Mandrillus_leucophaeus
ENSCAFG00000013776	DDX50	100	96.070	ENSMLEG00000037313	DDX50	100	96.070	Mandrillus_leucophaeus
ENSCAFG00000013776	DDX50	60	92.995	ENSMAUG00000022192	Ddx50	100	92.995	Mesocricetus_auratus
ENSCAFG00000013776	DDX50	100	89.973	ENSMICG00000017539	DDX50	100	89.973	Microcebus_murinus
ENSCAFG00000013776	DDX50	99	94.860	ENSMOCG00000001676	Ddx50	93	94.307	Microtus_ochrogaster
ENSCAFG00000013776	DDX50	99	80.088	ENSMODG00000010741	DDX50	93	80.115	Monodelphis_domestica
ENSCAFG00000013776	DDX50	99	93.814	MGP_CAROLIEiJ_G0015389	Ddx50	93	94.583	Mus_caroli
ENSCAFG00000013776	DDX50	99	94.256	ENSMUSG00000020076	Ddx50	93	94.876	Mus_musculus
ENSCAFG00000013776	DDX50	99	94.404	MGP_PahariEiJ_G0030805	Ddx50	93	95.022	Mus_pahari
ENSCAFG00000013776	DDX50	99	94.256	MGP_SPRETEiJ_G0016200	Ddx50	93	94.876	Mus_spretus
ENSCAFG00000013776	DDX50	94	98.613	ENSMPUG00000004589	DDX50	100	98.613	Mustela_putorius_furo
ENSCAFG00000013776	DDX50	100	96.206	ENSMLUG00000017590	DDX50	100	96.206	Myotis_lucifugus
ENSCAFG00000013776	DDX50	100	96.070	ENSNGAG00000004283	Ddx50	100	96.070	Nannospalax_galili
ENSCAFG00000013776	DDX50	100	97.832	ENSNLEG00000011631	DDX50	100	97.832	Nomascus_leucogenys
ENSCAFG00000013776	DDX50	88	70.000	ENSNLEG00000035506	-	90	77.744	Nomascus_leucogenys
ENSCAFG00000013776	DDX50	99	93.962	ENSOPRG00000001619	DDX50	93	94.729	Ochotona_princeps
ENSCAFG00000013776	DDX50	100	96.070	ENSODEG00000014597	-	100	96.070	Octodon_degus
ENSCAFG00000013776	DDX50	93	69.518	ENSOANG00000004776	DDX50	76	71.906	Ornithorhynchus_anatinus
ENSCAFG00000013776	DDX50	99	95.582	ENSOCUG00000002879	DDX50	96	95.328	Oryctolagus_cuniculus
ENSCAFG00000013776	DDX50	100	97.425	ENSOGAG00000001844	DDX50	100	97.425	Otolemur_garnettii
ENSCAFG00000013776	DDX50	100	97.234	ENSOARG00000005264	DDX50	99	97.154	Ovis_aries
ENSCAFG00000013776	DDX50	100	97.696	ENSPPAG00000040723	DDX50	100	97.696	Pan_paniscus
ENSCAFG00000013776	DDX50	51	71.053	ENSPPAG00000026788	-	92	78.354	Pan_paniscus
ENSCAFG00000013776	DDX50	100	99.322	ENSPPRG00000015826	DDX50	100	99.322	Panthera_pardus
ENSCAFG00000013776	DDX50	100	99.322	ENSPTIG00000008454	DDX50	100	99.322	Panthera_tigris_altaica
ENSCAFG00000013776	DDX50	100	97.696	ENSPTRG00000002562	DDX50	100	97.696	Pan_troglodytes
ENSCAFG00000013776	DDX50	51	71.053	ENSPTRG00000044913	-	99	72.105	Pan_troglodytes
ENSCAFG00000013776	DDX50	99	90.280	ENSPANG00000022143	-	93	90.087	Papio_anubis
ENSCAFG00000013776	DDX50	99	94.109	ENSPEMG00000020899	-	93	93.997	Peromyscus_maniculatus_bairdii
ENSCAFG00000013776	DDX50	98	79.883	ENSPCIG00000016036	DDX50	95	79.913	Phascolarctos_cinereus
ENSCAFG00000013776	DDX50	91	98.811	ENSPPYG00000002390	DDX50	100	98.811	Pongo_abelii
ENSCAFG00000013776	DDX50	90	83.144	ENSPCAG00000009692	DDX50	100	83.144	Procavia_capensis
ENSCAFG00000013776	DDX50	79	91.045	ENSPCOG00000012574	DDX50	91	91.045	Propithecus_coquereli
ENSCAFG00000013776	DDX50	86	95.879	ENSPVAG00000009519	DDX50	79	95.879	Pteropus_vampyrus
ENSCAFG00000013776	DDX50	99	93.667	ENSRNOG00000000396	Ddx50	98	98.128	Rattus_norvegicus
ENSCAFG00000013776	DDX50	94	96.429	ENSRBIG00000042841	-	98	98.456	Rhinopithecus_bieti
ENSCAFG00000013776	DDX50	99	67.711	ENSRBIG00000036573	-	93	67.742	Rhinopithecus_bieti
ENSCAFG00000013776	DDX50	99	67.105	ENSRBIG00000039673	-	91	66.038	Rhinopithecus_bieti
ENSCAFG00000013776	DDX50	100	97.696	ENSRROG00000032158	DDX50	100	98.516	Rhinopithecus_roxellana
ENSCAFG00000013776	DDX50	52	71.279	ENSRROG00000031940	-	89	74.699	Rhinopithecus_roxellana
ENSCAFG00000013776	DDX50	99	64.993	ENSRROG00000022853	-	93	64.474	Rhinopithecus_roxellana
ENSCAFG00000013776	DDX50	99	86.303	ENSSBOG00000014441	DDX50	99	87.639	Saimiri_boliviensis_boliviensis
ENSCAFG00000013776	DDX50	95	81.032	ENSSHAG00000005690	DDX50	92	81.024	Sarcophilus_harrisii
ENSCAFG00000013776	DDX50	85	67.446	ENSSHAG00000005334	-	86	64.526	Sarcophilus_harrisii
ENSCAFG00000013776	DDX50	94	88.545	ENSSARG00000013553	DDX50	88	88.545	Sorex_araneus
ENSCAFG00000013776	DDX50	100	96.612	ENSSSCG00000010246	DDX50	99	96.612	Sus_scrofa
ENSCAFG00000013776	DDX50	99	74.080	ENSTBEG00000001085	DDX50	93	74.636	Tupaia_belangeri
ENSCAFG00000013776	DDX50	100	91.328	ENSTTRG00000012408	DDX50	99	91.328	Tursiops_truncatus
ENSCAFG00000013776	DDX50	100	99.187	ENSUAMG00000010976	DDX50	100	99.187	Ursus_americanus
ENSCAFG00000013776	DDX50	100	99.187	ENSUMAG00000007726	DDX50	99	99.187	Ursus_maritimus
ENSCAFG00000013776	DDX50	100	97.425	ENSVPAG00000000626	DDX50	100	97.425	Vicugna_pacos
ENSCAFG00000013776	DDX50	88	94.030	ENSVVUG00000020366	DDX50	98	100.000	Vulpes_vulpes