EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000014026 (Gene tree)
Gene ID: 100687512
Gene Symbol: TYSND1
Alias: MGC34695|NET41
Full Name: trypsin domain containing 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 25675 bases
Position: chr4:21106873-21132547
Accession: 100687512
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000020683	MMR_HSR1	PF01926.23	7.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000035412	TYSND1-202	1257	XM_005619433	ENSCAFP00000030668	418 (aa)	-	E2R4X7
ENSCAFT00000022270	TYSND1-203	597	XM_005618980	ENSCAFP00000020683	198 (aa)	XP_005619037	E2RQR5
ENSCAFT00000049497	TYSND1-201	4713	-	ENSCAFP00000041285	198 (aa)	-	J9P6K2

Gene Model

Click here to download ENSCAFG00000014026's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa04141	Protein processing in endoplasmic reticulum	KEGG
cfa05134	Legionellosis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000014026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000014026	TYSND1	60	32.203	ENSCAFG00000028760	ARL2-SNX15	76	32.203
ENSCAFG00000014026	TYSND1	100	90.909	ENSCAFG00000031992	SAR1B	100	90.909
ENSCAFG00000014026	TYSND1	64	33.333	ENSCAFG00000012001	ARL4C	73	33.333
ENSCAFG00000014026	TYSND1	86	33.523	ENSCAFG00000014581	ARL4D	60	40.496
ENSCAFG00000014026	TYSND1	91	30.435	ENSCAFG00000009111	ARL6	92	30.435
ENSCAFG00000014026	TYSND1	73	34.868	ENSCAFG00000002318	ARL4A	76	34.868
ENSCAFG00000014026	TYSND1	65	30.769	ENSCAFG00000016697	ARL10	66	30.769
ENSCAFG00000014026	TYSND1	80	30.818	ENSCAFG00000010243	ARL3	64	33.594

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000014026	TYSND1	60	82.353	ENSAMXG00000012438	tysnd1	98	82.353	Astyanax_mexicanus
ENSCAFG00000014026	TYSND1	100	86.869	ENSIPUG00000024669	SAR1B	100	86.869	Ictalurus_punctatus