EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000015308 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 569 bases
Position: chrJH373335.1:194892-195460
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000022565	Ribosomal_L23	PF00276.20	5.6e-12	1	1
ENSCAFP00000022565	Ribosomal_L23eN	PF03939.13	2.8e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000024308	-	438	-	ENSCAFP00000022565	145 (aa)	-	H9GWH4

Gene Model

Click here to download ENSCAFG00000015308's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000015308's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000015308	-	99	49.655	ENSCAFG00000003274	-	95	49.655
ENSCAFG00000015308	-	82	67.769	ENSCAFG00000001968	-	96	67.105
ENSCAFG00000015308	-	82	67.769	ENSCAFG00000018784	-	96	67.105
ENSCAFG00000015308	-	66	67.010	ENSCAFG00000030594	-	94	59.211
ENSCAFG00000015308	-	82	59.167	ENSCAFG00000002410	-	96	60.667
ENSCAFG00000015308	-	82	62.810	ENSCAFG00000031555	-	96	62.500
ENSCAFG00000015308	-	82	67.769	ENSCAFG00000024427	-	93	65.306
ENSCAFG00000015308	-	58	61.290	ENSCAFG00000007718	-	95	54.815
ENSCAFG00000015308	-	82	67.769	ENSCAFG00000002548	-	96	67.105
ENSCAFG00000015308	-	62	61.702	ENSCAFG00000004716	-	95	52.414
ENSCAFG00000015308	-	64	68.750	ENSCAFG00000003753	-	94	60.927
ENSCAFG00000015308	-	82	67.769	ENSCAFG00000016268	-	96	67.105
ENSCAFG00000015308	-	82	60.833	ENSCAFG00000018232	-	96	60.667
ENSCAFG00000015308	-	99	48.630	ENSCAFG00000003985	-	97	48.630
ENSCAFG00000015308	-	83	60.976	ENSCAFG00000007256	-	96	60.526
ENSCAFG00000015308	-	100	64.000	ENSCAFG00000030051	-	96	64.000
ENSCAFG00000015308	-	82	67.769	ENSCAFG00000004003	-	99	66.447
ENSCAFG00000015308	-	100	45.098	ENSCAFG00000006700	-	96	45.098
ENSCAFG00000015308	-	66	68.041	ENSCAFG00000005724	-	97	58.940
ENSCAFG00000015308	-	55	51.250	ENSCAFG00000028825	-	57	54.054
ENSCAFG00000015308	-	82	67.500	ENSCAFG00000020044	-	96	67.550
ENSCAFG00000015308	-	100	87.179	ENSCAFG00000003391	-	100	87.179
ENSCAFG00000015308	-	66	70.103	ENSCAFG00000017753	-	96	62.162
ENSCAFG00000015308	-	66	62.500	ENSCAFG00000001011	-	95	56.376
ENSCAFG00000015308	-	100	48.299	ENSCAFG00000014107	-	96	50.676
ENSCAFG00000015308	-	82	67.769	ENSCAFG00000015394	-	96	67.105
ENSCAFG00000015308	-	74	67.890	ENSCAFG00000004933	-	99	64.384
ENSCAFG00000015308	-	82	68.333	ENSCAFG00000024043	-	96	67.550
ENSCAFG00000015308	-	94	56.522	ENSCAFG00000019297	-	98	59.589
ENSCAFG00000015308	-	88	63.846	ENSCAFG00000000014	-	96	64.052
ENSCAFG00000015308	-	82	67.769	ENSCAFG00000031731	-	96	67.105
ENSCAFG00000015308	-	77	58.772	ENSCAFG00000003047	-	96	58.278
ENSCAFG00000015308	-	77	61.947	ENSCAFG00000017449	-	97	58.278
ENSCAFG00000015308	-	62	66.304	ENSCAFG00000009706	-	95	51.389
ENSCAFG00000015308	-	81	63.025	ENSCAFG00000004370	-	95	64.238
ENSCAFG00000015308	-	99	59.732	ENSCAFG00000017678	-	95	59.732

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000015308	-	99	53.020	ENSAMEG00000005208	-	95	53.020	Ailuropoda_melanoleuca
ENSCAFG00000015308	-	63	65.957	ENSCGRG00001011003	-	96	57.616	Cricetulus_griseus_chok1gshd
ENSCAFG00000015308	-	63	65.957	ENSCGRG00000019420	-	96	57.616	Cricetulus_griseus_crigri
ENSCAFG00000015308	-	99	51.034	ENSDNOG00000041286	-	95	51.034	Dasypus_novemcinctus
ENSCAFG00000015308	-	100	49.669	ENSDNOG00000039276	-	94	49.669	Dasypus_novemcinctus
ENSCAFG00000015308	-	53	52.564	MGP_CAROLIEiJ_G0018758	-	64	52.564	Mus_caroli
ENSCAFG00000015308	-	66	46.392	MGP_SPRETEiJ_G0019641	-	79	46.392	Mus_spretus
ENSCAFG00000015308	-	100	52.703	ENSOCUG00000021843	-	96	52.703	Oryctolagus_cuniculus