EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000015581 (Gene tree)
Gene ID: 477581
Gene Symbol: A1CF
Alias: -
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 75744 bases
Position: chr26:37027069-37102812
Accession: 37399
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000022926	DND1_DSRM	PF14709.7	1.1e-24	1	1
ENSCAFP00000022926	RRM_1	PF00076.22	2.3e-40	1	3
ENSCAFP00000022926	RRM_1	PF00076.22	2.3e-40	2	3
ENSCAFP00000022926	RRM_1	PF00076.22	2.3e-40	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000024715	-	2066	XM_534776	ENSCAFP00000022926	590 (aa)	XP_534776	E2QWK5

Gene Model

Click here to download ENSCAFG00000015581's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000015581's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000015581	A1CF	78	71.333	ENSCAFG00000008473	RBM46	82	71.333
ENSCAFG00000015581	A1CF	74	57.399	ENSCAFG00000015898	RBM47	73	57.237
ENSCAFG00000015581	A1CF	52	52.104	ENSCAFG00000003024	SYNCRIP	57	51.077

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000015581	A1CF	100	95.455	ENSG00000148584	A1CF	100	97.015	Homo_sapiens
ENSCAFG00000015581	A1CF	100	73.167	ENSAPOG00000008259	a1cf	100	72.955	Acanthochromis_polyacanthus
ENSCAFG00000015581	A1CF	100	97.804	ENSAMEG00000000523	A1CF	100	97.804	Ailuropoda_melanoleuca
ENSCAFG00000015581	A1CF	100	75.530	ENSACIG00000008632	a1cf	100	76.509	Amphilophus_citrinellus
ENSCAFG00000015581	A1CF	100	73.520	ENSAOCG00000023744	a1cf	96	83.188	Amphiprion_ocellaris
ENSCAFG00000015581	A1CF	100	74.507	ENSAPEG00000009537	a1cf	100	75.124	Amphiprion_percula
ENSCAFG00000015581	A1CF	100	75.407	ENSATEG00000013720	a1cf	100	76.721	Anabas_testudineus
ENSCAFG00000015581	A1CF	100	89.020	ENSAPLG00000002964	A1CF	100	88.682	Anas_platyrhynchos
ENSCAFG00000015581	A1CF	100	83.615	ENSACAG00000015269	A1CF	100	82.939	Anolis_carolinensis
ENSCAFG00000015581	A1CF	100	94.444	ENSANAG00000019974	A1CF	100	93.603	Aotus_nancymaae
ENSCAFG00000015581	A1CF	100	73.520	ENSACLG00000017428	a1cf	100	75.822	Astatotilapia_calliptera
ENSCAFG00000015581	A1CF	100	74.380	ENSAMXG00000018180	a1cf	100	74.050	Astyanax_mexicanus
ENSCAFG00000015581	A1CF	100	93.613	ENSBTAG00000021195	A1CF	100	95.055	Bos_taurus
ENSCAFG00000015581	A1CF	100	96.128	ENSCJAG00000005045	A1CF	100	96.128	Callithrix_jacchus
ENSCAFG00000015581	A1CF	100	100.000	ENSCAFG00020026421	A1CF	100	100.000	Canis_lupus_dingo
ENSCAFG00000015581	A1CF	100	94.622	ENSCHIG00000020411	A1CF	100	94.454	Capra_hircus
ENSCAFG00000015581	A1CF	95	94.296	ENSTSYG00000001755	A1CF	100	93.560	Carlito_syrichta
ENSCAFG00000015581	A1CF	100	81.288	ENSCAPG00000017386	A1CF	100	81.288	Cavia_aperea
ENSCAFG00000015581	A1CF	100	94.276	ENSCPOG00000009807	A1CF	100	93.603	Cavia_porcellus
ENSCAFG00000015581	A1CF	100	96.121	ENSCCAG00000018168	A1CF	100	96.121	Cebus_capucinus
ENSCAFG00000015581	A1CF	100	94.426	ENSCATG00000043715	A1CF	100	93.919	Cercocebus_atys
ENSCAFG00000015581	A1CF	100	94.295	ENSCLAG00000010424	A1CF	100	93.792	Chinchilla_lanigera
ENSCAFG00000015581	A1CF	100	95.608	ENSCSAG00000007032	A1CF	100	95.101	Chlorocebus_sabaeus
ENSCAFG00000015581	A1CF	98	89.492	ENSCHOG00000009089	A1CF	98	89.153	Choloepus_hoffmanni
ENSCAFG00000015581	A1CF	100	88.682	ENSCPBG00000026464	A1CF	100	88.176	Chrysemys_picta_bellii
ENSCAFG00000015581	A1CF	100	96.115	ENSCANG00000038032	A1CF	100	96.115	Colobus_angolensis_palliatus
ENSCAFG00000015581	A1CF	100	92.773	ENSCGRG00001017413	A1cf	100	92.269	Cricetulus_griseus_chok1gshd
ENSCAFG00000015581	A1CF	100	92.101	ENSCGRG00000017332	A1cf	100	92.437	Cricetulus_griseus_crigri
ENSCAFG00000015581	A1CF	100	74.129	ENSCSEG00000002361	a1cf	100	74.917	Cynoglossus_semilaevis
ENSCAFG00000015581	A1CF	100	74.267	ENSCVAG00000010520	a1cf	100	76.230	Cyprinodon_variegatus
ENSCAFG00000015581	A1CF	100	77.090	ENSDARG00000002968	a1cf	100	78.595	Danio_rerio
ENSCAFG00000015581	A1CF	100	94.949	ENSDNOG00000002829	A1CF	100	94.276	Dasypus_novemcinctus
ENSCAFG00000015581	A1CF	81	91.667	ENSETEG00000012527	A1CF	81	91.667	Echinops_telfairi
ENSCAFG00000015581	A1CF	100	96.482	ENSEASG00005012924	A1CF	100	96.482	Equus_asinus_asinus
ENSCAFG00000015581	A1CF	100	96.147	ENSECAG00000010424	A1CF	100	96.147	Equus_caballus
ENSCAFG00000015581	A1CF	78	80.472	ENSEEUG00000000013	A1CF	96	81.250	Erinaceus_europaeus
ENSCAFG00000015581	A1CF	100	78.559	ENSELUG00000003159	a1cf	100	79.229	Esox_lucius
ENSCAFG00000015581	A1CF	100	95.439	ENSFCAG00000011179	A1CF	100	95.439	Felis_catus
ENSCAFG00000015581	A1CF	100	86.824	ENSFALG00000013183	A1CF	100	86.486	Ficedula_albicollis
ENSCAFG00000015581	A1CF	100	91.933	ENSFDAG00000019371	A1CF	100	91.429	Fukomys_damarensis
ENSCAFG00000015581	A1CF	100	69.707	ENSFHEG00000019652	a1cf	96	82.031	Fundulus_heteroclitus
ENSCAFG00000015581	A1CF	100	72.231	ENSGMOG00000018943	a1cf	100	71.642	Gadus_morhua
ENSCAFG00000015581	A1CF	95	88.948	ENSGALG00000003765	A1CF	97	88.592	Gallus_gallus
ENSCAFG00000015581	A1CF	100	69.243	ENSGAFG00000014868	a1cf	100	70.066	Gambusia_affinis
ENSCAFG00000015581	A1CF	100	73.355	ENSGACG00000010241	a1cf	100	73.684	Gasterosteus_aculeatus
ENSCAFG00000015581	A1CF	94	88.909	ENSGAGG00000016508	A1CF	97	88.372	Gopherus_agassizii
ENSCAFG00000015581	A1CF	100	95.623	ENSGGOG00000009670	A1CF	100	94.781	Gorilla_gorilla
ENSCAFG00000015581	A1CF	100	74.388	ENSHBUG00000021959	a1cf	100	76.020	Haplochromis_burtoni
ENSCAFG00000015581	A1CF	100	94.118	ENSHGLG00000008955	A1CF	100	93.613	Heterocephalus_glaber_female
ENSCAFG00000015581	A1CF	100	93.445	ENSHGLG00100000518	A1CF	100	92.941	Heterocephalus_glaber_male
ENSCAFG00000015581	A1CF	100	69.885	ENSHCOG00000017669	a1cf	100	71.895	Hippocampus_comes
ENSCAFG00000015581	A1CF	90	82.463	ENSIPUG00000010367	a1cf	99	81.013	Ictalurus_punctatus
ENSCAFG00000015581	A1CF	100	76.260	ENSKMAG00000006568	a1cf	100	76.585	Kryptolebias_marmoratus
ENSCAFG00000015581	A1CF	99	74.632	ENSLBEG00000020994	a1cf	98	76.277	Labrus_bergylta
ENSCAFG00000015581	A1CF	100	81.008	ENSLACG00000008061	A1CF	100	80.504	Latimeria_chalumnae
ENSCAFG00000015581	A1CF	100	82.383	ENSLOCG00000006302	a1cf	100	82.047	Lepisosteus_oculatus
ENSCAFG00000015581	A1CF	100	93.782	ENSLAFG00000015462	A1CF	100	93.109	Loxodonta_africana
ENSCAFG00000015581	A1CF	100	94.595	ENSMFAG00000035948	A1CF	100	94.088	Macaca_fascicularis
ENSCAFG00000015581	A1CF	100	94.595	ENSMMUG00000007077	A1CF	100	94.088	Macaca_mulatta
ENSCAFG00000015581	A1CF	100	94.257	ENSMNEG00000031454	A1CF	100	93.750	Macaca_nemestrina
ENSCAFG00000015581	A1CF	100	96.115	ENSMLEG00000037223	A1CF	100	96.115	Mandrillus_leucophaeus
ENSCAFG00000015581	A1CF	100	73.115	ENSMAMG00000010402	a1cf	100	74.426	Mastacembelus_armatus
ENSCAFG00000015581	A1CF	100	76.678	ENSMZEG00005013245	a1cf	100	77.349	Maylandia_zebra
ENSCAFG00000015581	A1CF	100	89.039	ENSMGAG00000001507	A1CF	100	88.702	Meleagris_gallopavo
ENSCAFG00000015581	A1CF	100	91.933	ENSMAUG00000007422	A1cf	100	91.765	Mesocricetus_auratus
ENSCAFG00000015581	A1CF	100	92.809	ENSMICG00000003377	A1CF	100	92.809	Microcebus_murinus
ENSCAFG00000015581	A1CF	100	92.605	ENSMOCG00000021536	A1cf	100	91.933	Microtus_ochrogaster
ENSCAFG00000015581	A1CF	100	67.323	ENSMMOG00000009422	a1cf	100	69.357	Mola_mola
ENSCAFG00000015581	A1CF	92	89.358	ENSMODG00000016478	A1CF	96	90.133	Monodelphis_domestica
ENSCAFG00000015581	A1CF	100	73.322	ENSMALG00000012992	a1cf	100	72.651	Monopterus_albus
ENSCAFG00000015581	A1CF	100	92.101	MGP_CAROLIEiJ_G0022873	A1cf	100	91.092	Mus_caroli
ENSCAFG00000015581	A1CF	100	92.101	ENSMUSG00000052595	A1cf	99	94.474	Mus_musculus
ENSCAFG00000015581	A1CF	100	91.261	MGP_PahariEiJ_G0014366	A1cf	100	90.420	Mus_pahari
ENSCAFG00000015581	A1CF	100	91.597	MGP_SPRETEiJ_G0023792	A1cf	100	90.588	Mus_spretus
ENSCAFG00000015581	A1CF	100	89.865	ENSMPUG00000016971	A1CF	100	90.541	Mustela_putorius_furo
ENSCAFG00000015581	A1CF	100	94.118	ENSMLUG00000016071	A1CF	100	94.454	Myotis_lucifugus
ENSCAFG00000015581	A1CF	100	93.445	ENSNGAG00000015136	A1cf	100	92.941	Nannospalax_galili
ENSCAFG00000015581	A1CF	100	74.715	ENSNBRG00000001712	a1cf	100	76.020	Neolamprologus_brichardi
ENSCAFG00000015581	A1CF	100	96.303	ENSNLEG00000012028	A1CF	100	96.303	Nomascus_leucogenys
ENSCAFG00000015581	A1CF	94	88.730	ENSMEUG00000015909	A1CF	100	88.372	Notamacropus_eugenii
ENSCAFG00000015581	A1CF	89	83.619	ENSOPRG00000010667	A1CF	96	83.650	Ochotona_princeps
ENSCAFG00000015581	A1CF	100	75.041	ENSONIG00000019105	a1cf	100	75.856	Oreochromis_niloticus
ENSCAFG00000015581	A1CF	79	87.580	ENSOANG00000007360	A1CF	99	87.580	Ornithorhynchus_anatinus
ENSCAFG00000015581	A1CF	100	91.779	ENSOCUG00000011587	A1CF	100	92.114	Oryctolagus_cuniculus
ENSCAFG00000015581	A1CF	100	74.426	ENSORLG00000013342	a1cf	100	74.267	Oryzias_latipes
ENSCAFG00000015581	A1CF	100	75.123	ENSORLG00020000586	a1cf	100	75.327	Oryzias_latipes_hni
ENSCAFG00000015581	A1CF	100	74.959	ENSORLG00015018569	a1cf	100	75.163	Oryzias_latipes_hsok
ENSCAFG00000015581	A1CF	100	74.632	ENSOMEG00000013531	a1cf	100	73.977	Oryzias_melastigma
ENSCAFG00000015581	A1CF	100	93.412	ENSOGAG00000012884	A1CF	100	93.581	Otolemur_garnettii
ENSCAFG00000015581	A1CF	100	94.454	ENSOARG00000013695	A1CF	100	94.454	Ovis_aries
ENSCAFG00000015581	A1CF	97	93.576	ENSPPAG00000028115	A1CF	99	96.755	Pan_paniscus
ENSCAFG00000015581	A1CF	100	97.128	ENSPPRG00000012180	A1CF	100	97.128	Panthera_pardus
ENSCAFG00000015581	A1CF	100	97.128	ENSPTIG00000021223	A1CF	100	97.128	Panthera_tigris_altaica
ENSCAFG00000015581	A1CF	100	95.455	ENSPTRG00000002508	A1CF	100	94.613	Pan_troglodytes
ENSCAFG00000015581	A1CF	100	94.595	ENSPANG00000021988	A1CF	100	94.088	Papio_anubis
ENSCAFG00000015581	A1CF	100	80.402	ENSPKIG00000025176	a1cf	100	80.402	Paramormyrops_kingsleyae
ENSCAFG00000015581	A1CF	100	86.993	ENSPSIG00000010318	A1CF	100	86.486	Pelodiscus_sinensis
ENSCAFG00000015581	A1CF	98	65.695	ENSPMGG00000013359	a1cf	99	66.438	Periophthalmus_magnuspinnatus
ENSCAFG00000015581	A1CF	100	93.277	ENSPEMG00000015021	A1cf	100	92.437	Peromyscus_maniculatus_bairdii
ENSCAFG00000015581	A1CF	100	88.682	ENSPCIG00000002175	A1CF	100	88.345	Phascolarctos_cinereus
ENSCAFG00000015581	A1CF	100	75.407	ENSPFOG00000007437	-	100	77.036	Poecilia_formosa
ENSCAFG00000015581	A1CF	100	75.570	ENSPFOG00000006683	a1cf	100	77.199	Poecilia_formosa
ENSCAFG00000015581	A1CF	100	74.267	ENSPLAG00000000026	a1cf	100	75.896	Poecilia_latipinna
ENSCAFG00000015581	A1CF	100	74.267	ENSPLAG00000001210	-	100	75.896	Poecilia_latipinna
ENSCAFG00000015581	A1CF	100	66.993	ENSPMEG00000000921	a1cf	100	68.464	Poecilia_mexicana
ENSCAFG00000015581	A1CF	100	68.137	ENSPMEG00000015529	-	100	69.608	Poecilia_mexicana
ENSCAFG00000015581	A1CF	100	75.407	ENSPREG00000016298	a1cf	100	76.710	Poecilia_reticulata
ENSCAFG00000015581	A1CF	100	94.622	ENSPPYG00000002819	A1CF	100	94.286	Pongo_abelii
ENSCAFG00000015581	A1CF	79	72.669	ENSPCAG00000006463	A1CF	79	72.669	Procavia_capensis
ENSCAFG00000015581	A1CF	100	94.966	ENSPCOG00000024172	A1CF	100	94.966	Propithecus_coquereli
ENSCAFG00000015581	A1CF	100	75.693	ENSPNYG00000017944	a1cf	100	77.325	Pundamilia_nyererei
ENSCAFG00000015581	A1CF	100	79.470	ENSPNAG00000007704	a1cf	100	78.974	Pygocentrus_nattereri
ENSCAFG00000015581	A1CF	100	91.092	ENSRNOG00000033195	A1cf	100	90.084	Rattus_norvegicus
ENSCAFG00000015581	A1CF	100	89.226	ENSRBIG00000042892	A1CF	100	91.929	Rhinopithecus_bieti
ENSCAFG00000015581	A1CF	100	96.284	ENSRROG00000041398	A1CF	100	96.284	Rhinopithecus_roxellana
ENSCAFG00000015581	A1CF	100	95.798	ENSSBOG00000021930	A1CF	100	95.798	Saimiri_boliviensis_boliviensis
ENSCAFG00000015581	A1CF	100	89.545	ENSSHAG00000005096	A1CF	100	89.376	Sarcophilus_harrisii
ENSCAFG00000015581	A1CF	100	78.607	ENSSFOG00015011774	a1cf	100	78.109	Scleropages_formosus
ENSCAFG00000015581	A1CF	100	74.593	ENSSMAG00000013271	a1cf	100	75.244	Scophthalmus_maximus
ENSCAFG00000015581	A1CF	100	76.119	ENSSDUG00000013930	a1cf	100	76.962	Seriola_dumerili
ENSCAFG00000015581	A1CF	100	68.812	ENSSLDG00000004290	a1cf	100	70.100	Seriola_lalandi_dorsalis
ENSCAFG00000015581	A1CF	95	83.216	ENSSARG00000005940	A1CF	96	83.039	Sorex_araneus
ENSCAFG00000015581	A1CF	95	87.611	ENSSPUG00000006797	A1CF	95	87.080	Sphenodon_punctatus
ENSCAFG00000015581	A1CF	100	95.798	ENSSSCG00000010431	A1CF	100	95.798	Sus_scrofa
ENSCAFG00000015581	A1CF	100	87.960	ENSTGUG00000005090	A1CF	100	87.960	Taeniopygia_guttata
ENSCAFG00000015581	A1CF	100	73.899	ENSTRUG00000001982	a1cf	100	73.573	Takifugu_rubripes
ENSCAFG00000015581	A1CF	100	74.472	ENSTNIG00000003580	a1cf	100	74.309	Tetraodon_nigroviridis
ENSCAFG00000015581	A1CF	97	86.828	ENSTTRG00000013190	A1CF	95	86.828	Tursiops_truncatus
ENSCAFG00000015581	A1CF	100	96.284	ENSUAMG00000020065	A1CF	100	96.284	Ursus_americanus
ENSCAFG00000015581	A1CF	100	97.462	ENSUMAG00000011162	A1CF	100	97.462	Ursus_maritimus
ENSCAFG00000015581	A1CF	87	89.060	ENSVPAG00000006130	A1CF	86	88.868	Vicugna_pacos
ENSCAFG00000015581	A1CF	100	98.475	ENSVVUG00000002504	A1CF	100	98.475	Vulpes_vulpes
ENSCAFG00000015581	A1CF	100	79.195	ENSXETG00000006611	a1cf	100	79.195	Xenopus_tropicalis
ENSCAFG00000015581	A1CF	100	75.410	ENSXCOG00000003302	a1cf	100	76.393	Xiphophorus_couchianus
ENSCAFG00000015581	A1CF	100	76.557	ENSXMAG00000016703	a1cf	100	77.541	Xiphophorus_maculatus