EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSCAFG00000015898 (Gene tree)
Gene ID: 403423
Gene Symbol: RBM47
Alias: -
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 70155 bases
Position: chr3:72065612-72135766
Accession: 53198
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000023389	RRM_1	PF00076.22	1.3e-37	1	3
ENSCAFP00000023389	RRM_1	PF00076.22	1.3e-37	2	3
ENSCAFP00000023389	RRM_1	PF00076.22	1.3e-37	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000025193	-	5531	XM_005618245	ENSCAFP00000023389	592 (aa)	XP_005618302	F1Q212

Gene Model

Click here to download ENSCAFG00000015898's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000015898's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000015898	RBM47	50	56.000	ENSCAFG00000003024	SYNCRIP	79	46.292
ENSCAFG00000015898	RBM47	52	55.806	ENSCAFG00000013308	HNRNPR	70	45.843
ENSCAFG00000015898	RBM47	73	57.237	ENSCAFG00000015581	A1CF	74	57.399
ENSCAFG00000015898	RBM47	54	69.592	ENSCAFG00000008473	RBM46	62	73.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000015898	RBM47	100	93.289	ENSG00000163694	RBM47	99	93.321	Homo_sapiens
ENSCAFG00000015898	RBM47	100	77.592	ENSAPOG00000011062	rbm47	93	84.986	Acanthochromis_polyacanthus
ENSCAFG00000015898	RBM47	100	93.635	ENSAMEG00000009672	RBM47	96	94.939	Ailuropoda_melanoleuca
ENSCAFG00000015898	RBM47	100	76.254	ENSACIG00000011531	rbm47	97	77.391	Amphilophus_citrinellus
ENSCAFG00000015898	RBM47	100	78.559	ENSAOCG00000022245	rbm47	93	84.986	Amphiprion_ocellaris
ENSCAFG00000015898	RBM47	100	78.224	ENSAPEG00000018304	rbm47	93	84.986	Amphiprion_percula
ENSCAFG00000015898	RBM47	100	76.557	ENSATEG00000018400	rbm47	94	77.526	Anabas_testudineus
ENSCAFG00000015898	RBM47	100	86.700	ENSAPLG00000013974	RBM47	96	88.070	Anas_platyrhynchos
ENSCAFG00000015898	RBM47	100	84.307	ENSACAG00000011833	RBM47	100	84.307	Anolis_carolinensis
ENSCAFG00000015898	RBM47	100	92.953	ENSANAG00000029440	RBM47	96	92.832	Aotus_nancymaae
ENSCAFG00000015898	RBM47	100	75.574	ENSACLG00000016902	rbm47	94	84.986	Astatotilapia_calliptera
ENSCAFG00000015898	RBM47	100	75.369	ENSAMXG00000021794	rbm47	94	77.043	Astyanax_mexicanus
ENSCAFG00000015898	RBM47	100	93.266	ENSBTAG00000002356	RBM47	96	95.088	Bos_taurus
ENSCAFG00000015898	RBM47	100	92.965	ENSCJAG00000019385	RBM47	96	92.670	Callithrix_jacchus
ENSCAFG00000015898	RBM47	87	100.000	ENSCAFG00020010558	RBM47	94	100.000	Canis_lupus_dingo
ENSCAFG00000015898	RBM47	100	93.603	ENSCHIG00000026214	RBM47	96	95.263	Capra_hircus
ENSCAFG00000015898	RBM47	85	79.724	ENSTSYG00000033612	RBM47	92	89.823	Carlito_syrichta
ENSCAFG00000015898	RBM47	100	86.532	ENSCAPG00000008426	RBM47	89	91.825	Cavia_aperea
ENSCAFG00000015898	RBM47	100	92.593	ENSCPOG00000014100	RBM47	96	94.035	Cavia_porcellus
ENSCAFG00000015898	RBM47	100	92.630	ENSCCAG00000030129	-	96	92.496	Cebus_capucinus
ENSCAFG00000015898	RBM47	99	65.320	ENSCCAG00000024397	-	95	64.499	Cebus_capucinus
ENSCAFG00000015898	RBM47	100	93.456	ENSCATG00000042064	RBM47	96	93.182	Cercocebus_atys
ENSCAFG00000015898	RBM47	100	92.088	ENSCLAG00000001684	RBM47	96	93.684	Chinchilla_lanigera
ENSCAFG00000015898	RBM47	100	93.456	ENSCSAG00000017060	RBM47	96	93.182	Chlorocebus_sabaeus
ENSCAFG00000015898	RBM47	88	87.640	ENSCHOG00000011731	RBM47	84	88.124	Choloepus_hoffmanni
ENSCAFG00000015898	RBM47	100	87.646	ENSCPBG00000013831	RBM47	96	88.870	Chrysemys_picta_bellii
ENSCAFG00000015898	RBM47	100	93.289	ENSCANG00000019997	RBM47	96	93.007	Colobus_angolensis_palliatus
ENSCAFG00000015898	RBM47	89	86.842	ENSCGRG00001020102	-	96	71.178	Cricetulus_griseus_chok1gshd
ENSCAFG00000015898	RBM47	100	90.285	ENSCGRG00001000623	-	96	91.449	Cricetulus_griseus_chok1gshd
ENSCAFG00000015898	RBM47	100	89.447	ENSCGRG00000007762	-	96	90.576	Cricetulus_griseus_crigri
ENSCAFG00000015898	RBM47	89	86.316	ENSCGRG00000014760	-	96	71.178	Cricetulus_griseus_crigri
ENSCAFG00000015898	RBM47	100	74.333	ENSCSEG00000004545	rbm47	97	75.521	Cynoglossus_semilaevis
ENSCAFG00000015898	RBM47	96	77.352	ENSCVAG00000020144	rbm47	93	84.703	Cyprinodon_variegatus
ENSCAFG00000015898	RBM47	100	76.771	ENSDARG00000061985	rbm47	94	78.185	Danio_rerio
ENSCAFG00000015898	RBM47	100	91.906	ENSDNOG00000046854	RBM47	96	94.200	Dasypus_novemcinctus
ENSCAFG00000015898	RBM47	100	92.821	ENSDORG00000010144	Rbm47	96	93.739	Dipodomys_ordii
ENSCAFG00000015898	RBM47	96	92.894	ENSETEG00000009194	RBM47	96	92.683	Echinops_telfairi
ENSCAFG00000015898	RBM47	100	57.143	ENSEBUG00000011912	rbm47	96	58.131	Eptatretus_burgeri
ENSCAFG00000015898	RBM47	100	93.603	ENSEASG00005008443	RBM47	96	95.263	Equus_asinus_asinus
ENSCAFG00000015898	RBM47	100	93.603	ENSECAG00000004400	RBM47	96	95.263	Equus_caballus
ENSCAFG00000015898	RBM47	75	93.966	ENSEEUG00000001194	RBM47	71	96.154	Erinaceus_europaeus
ENSCAFG00000015898	RBM47	100	73.052	ENSELUG00000006148	rbm47	93	84.358	Esox_lucius
ENSCAFG00000015898	RBM47	100	94.604	ENSFCAG00000012399	RBM47	96	94.903	Felis_catus
ENSCAFG00000015898	RBM47	100	88.275	ENSFALG00000002861	RBM47	96	89.529	Ficedula_albicollis
ENSCAFG00000015898	RBM47	100	90.909	ENSFDAG00000016326	RBM47	96	91.579	Fukomys_damarensis
ENSCAFG00000015898	RBM47	100	76.589	ENSFHEG00000007938	rbm47	97	76.829	Fundulus_heteroclitus
ENSCAFG00000015898	RBM47	100	74.146	ENSGMOG00000014802	rbm47	93	76.132	Gadus_morhua
ENSCAFG00000015898	RBM47	64	88.889	ENSGALG00000014267	RBM47	94	91.525	Gallus_gallus
ENSCAFG00000015898	RBM47	64	81.698	ENSGAFG00000020571	rbm47	93	84.419	Gambusia_affinis
ENSCAFG00000015898	RBM47	100	73.529	ENSGACG00000016223	rbm47	93	81.586	Gasterosteus_aculeatus
ENSCAFG00000015898	RBM47	100	87.813	ENSGAGG00000020051	RBM47	96	89.043	Gopherus_agassizii
ENSCAFG00000015898	RBM47	100	93.456	ENSGGOG00000001367	RBM47	96	93.182	Gorilla_gorilla
ENSCAFG00000015898	RBM47	100	75.327	ENSHBUG00000003520	rbm47	94	84.986	Haplochromis_burtoni
ENSCAFG00000015898	RBM47	84	86.179	ENSHGLG00000016914	RBM47	93	87.805	Heterocephalus_glaber_female
ENSCAFG00000015898	RBM47	100	91.047	ENSHGLG00100014028	-	96	92.430	Heterocephalus_glaber_male
ENSCAFG00000015898	RBM47	100	81.757	ENSHGLG00100003071	-	96	82.746	Heterocephalus_glaber_male
ENSCAFG00000015898	RBM47	99	76.007	ENSHCOG00000002074	rbm47	93	80.965	Hippocampus_comes
ENSCAFG00000015898	RBM47	100	76.884	ENSIPUG00000004743	rbm47	97	77.408	Ictalurus_punctatus
ENSCAFG00000015898	RBM47	100	92.630	ENSSTOG00000004727	RBM47	96	93.892	Ictidomys_tridecemlineatus
ENSCAFG00000015898	RBM47	100	91.765	ENSJJAG00000013823	Rbm47	100	92.269	Jaculus_jaculus
ENSCAFG00000015898	RBM47	100	77.926	ENSKMAG00000000084	rbm47	93	83.853	Kryptolebias_marmoratus
ENSCAFG00000015898	RBM47	100	75.585	ENSLBEG00000008436	rbm47	93	81.870	Labrus_bergylta
ENSCAFG00000015898	RBM47	100	83.752	ENSLACG00000007196	RBM47	96	83.770	Latimeria_chalumnae
ENSCAFG00000015898	RBM47	100	81.407	ENSLOCG00000012966	rbm47	92	80.454	Lepisosteus_oculatus
ENSCAFG00000015898	RBM47	100	92.450	ENSLAFG00000011998	RBM47	96	93.182	Loxodonta_africana
ENSCAFG00000015898	RBM47	100	93.456	ENSMFAG00000037967	RBM47	96	93.182	Macaca_fascicularis
ENSCAFG00000015898	RBM47	100	93.456	ENSMMUG00000012036	RBM47	96	93.182	Macaca_mulatta
ENSCAFG00000015898	RBM47	100	93.289	ENSMNEG00000040774	RBM47	96	93.007	Macaca_nemestrina
ENSCAFG00000015898	RBM47	100	94.953	ENSMLEG00000041432	RBM47	97	96.928	Mandrillus_leucophaeus
ENSCAFG00000015898	RBM47	100	75.862	ENSMAMG00000019143	rbm47	93	84.986	Mastacembelus_armatus
ENSCAFG00000015898	RBM47	100	75.574	ENSMZEG00005023659	rbm47	94	77.604	Maylandia_zebra
ENSCAFG00000015898	RBM47	100	87.333	ENSMGAG00000012226	RBM47	96	88.542	Meleagris_gallopavo
ENSCAFG00000015898	RBM47	100	90.772	ENSMAUG00000006493	Rbm47	96	92.832	Mesocricetus_auratus
ENSCAFG00000015898	RBM47	100	90.725	ENSMICG00000026417	RBM47	96	91.501	Microcebus_murinus
ENSCAFG00000015898	RBM47	100	91.261	ENSMOCG00000021170	Rbm47	96	92.644	Microtus_ochrogaster
ENSCAFG00000015898	RBM47	100	75.902	ENSMMOG00000007260	rbm47	94	76.829	Mola_mola
ENSCAFG00000015898	RBM47	52	81.672	ENSMODG00000015426	-	96	79.288	Monodelphis_domestica
ENSCAFG00000015898	RBM47	100	82.293	ENSMODG00000020561	-	96	82.777	Monodelphis_domestica
ENSCAFG00000015898	RBM47	100	89.562	ENSMODG00000007003	RBM47	96	91.053	Monodelphis_domestica
ENSCAFG00000015898	RBM47	100	75.418	ENSMALG00000005167	rbm47	93	80.697	Monopterus_albus
ENSCAFG00000015898	RBM47	100	91.414	MGP_CAROLIEiJ_G0027258	Rbm47	96	92.632	Mus_caroli
ENSCAFG00000015898	RBM47	100	91.751	ENSMUSG00000070780	Rbm47	96	92.982	Mus_musculus
ENSCAFG00000015898	RBM47	100	91.582	MGP_PahariEiJ_G0017040	Rbm47	96	92.807	Mus_pahari
ENSCAFG00000015898	RBM47	100	91.737	MGP_SPRETEiJ_G0028253	Rbm47	96	92.970	Mus_spretus
ENSCAFG00000015898	RBM47	100	94.108	ENSMPUG00000006177	RBM47	90	95.439	Mustela_putorius_furo
ENSCAFG00000015898	RBM47	100	92.088	ENSMLUG00000000889	RBM47	96	92.281	Myotis_lucifugus
ENSCAFG00000015898	RBM47	100	91.443	ENSNGAG00000003325	Rbm47	96	92.483	Nannospalax_galili
ENSCAFG00000015898	RBM47	100	75.777	ENSNBRG00000015092	rbm47	94	77.816	Neolamprologus_brichardi
ENSCAFG00000015898	RBM47	100	93.121	ENSNLEG00000017151	RBM47	96	92.832	Nomascus_leucogenys
ENSCAFG00000015898	RBM47	72	85.480	ENSMEUG00000009516	-	98	86.019	Notamacropus_eugenii
ENSCAFG00000015898	RBM47	75	95.851	ENSOPRG00000016507	-	70	95.851	Ochotona_princeps
ENSCAFG00000015898	RBM47	100	92.424	ENSODEG00000004873	RBM47	96	93.860	Octodon_degus
ENSCAFG00000015898	RBM47	100	75.614	ENSONIG00000009061	rbm47	94	77.003	Oreochromis_niloticus
ENSCAFG00000015898	RBM47	100	86.767	ENSOANG00000008978	RBM47	95	89.825	Ornithorhynchus_anatinus
ENSCAFG00000015898	RBM47	100	94.266	ENSOCUG00000012034	RBM47	96	95.079	Oryctolagus_cuniculus
ENSCAFG00000015898	RBM47	100	75.960	ENSORLG00000005847	rbm47	93	82.720	Oryzias_latipes
ENSCAFG00000015898	RBM47	100	76.127	ENSORLG00020005154	rbm47	93	82.720	Oryzias_latipes_hni
ENSCAFG00000015898	RBM47	100	76.294	ENSORLG00015000066	rbm47	93	82.720	Oryzias_latipes_hsok
ENSCAFG00000015898	RBM47	100	77.592	ENSOMEG00000010730	rbm47	97	76.829	Oryzias_melastigma
ENSCAFG00000015898	RBM47	100	85.304	ENSOGAG00000025193	-	96	86.268	Otolemur_garnettii
ENSCAFG00000015898	RBM47	100	94.108	ENSOGAG00000029367	-	96	95.439	Otolemur_garnettii
ENSCAFG00000015898	RBM47	100	85.160	ENSOARG00000012711	RBM47	96	86.819	Ovis_aries
ENSCAFG00000015898	RBM47	100	93.289	ENSPPAG00000029763	RBM47	96	93.007	Pan_paniscus
ENSCAFG00000015898	RBM47	100	91.568	ENSPPRG00000012873	RBM47	96	91.740	Panthera_pardus
ENSCAFG00000015898	RBM47	85	92.016	ENSPTIG00000017046	RBM47	100	91.617	Panthera_tigris_altaica
ENSCAFG00000015898	RBM47	100	93.456	ENSPTRG00000016006	RBM47	96	93.182	Pan_troglodytes
ENSCAFG00000015898	RBM47	100	93.456	ENSPANG00000005980	RBM47	96	93.182	Papio_anubis
ENSCAFG00000015898	RBM47	98	74.024	ENSPKIG00000013431	RBM47	97	73.519	Paramormyrops_kingsleyae
ENSCAFG00000015898	RBM47	96	77.972	ENSPKIG00000005037	rbm47	95	75.131	Paramormyrops_kingsleyae
ENSCAFG00000015898	RBM47	90	88.324	ENSPSIG00000017516	RBM47	93	90.138	Pelodiscus_sinensis
ENSCAFG00000015898	RBM47	96	76.614	ENSPMGG00000018540	rbm47	97	74.695	Periophthalmus_magnuspinnatus
ENSCAFG00000015898	RBM47	100	91.275	ENSPEMG00000011088	Rbm47	96	92.832	Peromyscus_maniculatus_bairdii
ENSCAFG00000015898	RBM47	96	79.340	ENSPFOG00000007997	rbm47	94	77.778	Poecilia_formosa
ENSCAFG00000015898	RBM47	96	79.304	ENSPLAG00000002072	rbm47	97	84.419	Poecilia_latipinna
ENSCAFG00000015898	RBM47	100	77.667	ENSPMEG00000017492	rbm47	93	84.703	Poecilia_mexicana
ENSCAFG00000015898	RBM47	96	79.652	ENSPREG00000008456	rbm47	97	84.703	Poecilia_reticulata
ENSCAFG00000015898	RBM47	98	81.619	ENSPPYG00000014688	RBM47	98	80.690	Pongo_abelii
ENSCAFG00000015898	RBM47	81	93.781	ENSPCAG00000011879	RBM47	77	95.767	Procavia_capensis
ENSCAFG00000015898	RBM47	100	93.243	ENSPCOG00000023451	RBM47	96	94.718	Propithecus_coquereli
ENSCAFG00000015898	RBM47	100	92.114	ENSPVAG00000003812	RBM47	96	93.531	Pteropus_vampyrus
ENSCAFG00000015898	RBM47	100	75.367	ENSPNYG00000022868	rbm47	94	77.375	Pundamilia_nyererei
ENSCAFG00000015898	RBM47	100	76.066	ENSPNAG00000007940	rbm47	94	77.778	Pygocentrus_nattereri
ENSCAFG00000015898	RBM47	100	91.414	ENSRNOG00000002408	Rbm47	96	92.807	Rattus_norvegicus
ENSCAFG00000015898	RBM47	100	93.289	ENSRBIG00000039601	RBM47	96	93.007	Rhinopithecus_bieti
ENSCAFG00000015898	RBM47	100	93.289	ENSRROG00000044696	RBM47	96	93.007	Rhinopithecus_roxellana
ENSCAFG00000015898	RBM47	100	89.376	ENSSBOG00000028475	RBM47	95	94.372	Saimiri_boliviensis_boliviensis
ENSCAFG00000015898	RBM47	100	89.882	ENSSHAG00000017576	RBM47	96	91.213	Sarcophilus_harrisii
ENSCAFG00000015898	RBM47	97	77.202	ENSSFOG00015024101	RBM47	96	75.826	Scleropages_formosus
ENSCAFG00000015898	RBM47	100	73.179	ENSSFOG00015012445	rbm47	94	74.035	Scleropages_formosus
ENSCAFG00000015898	RBM47	100	74.468	ENSSMAG00000009744	rbm47	93	83.003	Scophthalmus_maximus
ENSCAFG00000015898	RBM47	100	77.425	ENSSDUG00000022684	rbm47	96	77.875	Seriola_dumerili
ENSCAFG00000015898	RBM47	100	77.759	ENSSLDG00000003109	rbm47	92	84.986	Seriola_lalandi_dorsalis
ENSCAFG00000015898	RBM47	85	93.333	ENSSARG00000001735	RBM47	71	94.601	Sorex_araneus
ENSCAFG00000015898	RBM47	100	85.427	ENSSPUG00000007515	RBM47	96	88.952	Sphenodon_punctatus
ENSCAFG00000015898	RBM47	100	77.926	ENSSPAG00000001257	rbm47	93	85.269	Stegastes_partitus
ENSCAFG00000015898	RBM47	100	93.098	ENSSSCG00000008796	RBM47	96	94.561	Sus_scrofa
ENSCAFG00000015898	RBM47	100	88.591	ENSTGUG00000008705	RBM47	96	90.035	Taeniopygia_guttata
ENSCAFG00000015898	RBM47	100	75.084	ENSTRUG00000014050	rbm47	98	75.261	Takifugu_rubripes
ENSCAFG00000015898	RBM47	100	75.041	ENSTNIG00000006127	rbm47	94	76.614	Tetraodon_nigroviridis
ENSCAFG00000015898	RBM47	77	89.655	ENSTBEG00000001607	RBM47	72	89.518	Tupaia_belangeri
ENSCAFG00000015898	RBM47	100	92.580	ENSTTRG00000002839	RBM47	96	95.079	Tursiops_truncatus
ENSCAFG00000015898	RBM47	100	94.949	ENSUAMG00000021346	RBM47	96	95.789	Ursus_americanus
ENSCAFG00000015898	RBM47	57	93.651	ENSVPAG00000000641	-	53	95.161	Vicugna_pacos
ENSCAFG00000015898	RBM47	100	98.311	ENSVVUG00000014774	RBM47	100	98.311	Vulpes_vulpes
ENSCAFG00000015898	RBM47	100	84.874	ENSXETG00000012802	rbm47	96	86.165	Xenopus_tropicalis
ENSCAFG00000015898	RBM47	88	81.432	ENSXCOG00000000780	rbm47	97	84.136	Xiphophorus_couchianus
ENSCAFG00000015898	RBM47	100	76.421	ENSXMAG00000009874	rbm47	93	84.136	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0016554	cytidine to uridine editing	-	IEA	Process