EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000016141 (Gene tree)
Gene ID: 480528
Gene Symbol: CASC3
Alias: -
Full Name: CASC3%2C exon junction complex subunit
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 25043 bases
Position: chr9:22403025-22428067
Accession: 54699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000023784	Btz	PF09405.10	9.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000025611	-	4613	XM_537649	ENSCAFP00000023784	703 (aa)	XP_537649	E2R5K5

Gene Model

Click here to download ENSCAFG00000016141's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03013	RNA transport	KEGG
cfa03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000016141's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000016141	CASC3	100	95.448	ENSG00000108349	CASC3	100	95.448	Homo_sapiens
ENSCAFG00000016141	CASC3	73	52.049	ENSAPOG00000008467	casc3	70	52.510	Acanthochromis_polyacanthus
ENSCAFG00000016141	CASC3	100	98.435	ENSAMEG00000007764	CASC3	100	98.435	Ailuropoda_melanoleuca
ENSCAFG00000016141	CASC3	78	48.501	ENSACIG00000000720	casc3	83	49.301	Amphilophus_citrinellus
ENSCAFG00000016141	CASC3	73	55.603	ENSATEG00000017196	casc3	67	55.603	Anabas_testudineus
ENSCAFG00000016141	CASC3	91	72.811	ENSACAG00000002674	CASC3	99	67.442	Anolis_carolinensis
ENSCAFG00000016141	CASC3	66	97.642	ENSANAG00000031954	-	100	97.642	Aotus_nancymaae
ENSCAFG00000016141	CASC3	99	82.709	ENSANAG00000034820	-	99	87.906	Aotus_nancymaae
ENSCAFG00000016141	CASC3	100	96.159	ENSBTAG00000006250	CASC3	100	96.159	Bos_taurus
ENSCAFG00000016141	CASC3	100	93.457	ENSCJAG00000016032	CASC3	100	93.457	Callithrix_jacchus
ENSCAFG00000016141	CASC3	100	99.006	ENSCAFG00020018882	CASC3	100	100.000	Canis_lupus_dingo
ENSCAFG00000016141	CASC3	100	94.737	ENSCHIG00000006338	CASC3	100	94.737	Capra_hircus
ENSCAFG00000016141	CASC3	100	89.047	ENSTSYG00000002975	CASC3	89	95.666	Carlito_syrichta
ENSCAFG00000016141	CASC3	88	89.610	ENSCAPG00000010514	CASC3	100	89.610	Cavia_aperea
ENSCAFG00000016141	CASC3	100	89.047	ENSCPOG00000015139	CASC3	100	88.905	Cavia_porcellus
ENSCAFG00000016141	CASC3	100	93.892	ENSCCAG00000033620	CASC3	100	94.034	Cebus_capucinus
ENSCAFG00000016141	CASC3	100	95.881	ENSCATG00000033593	CASC3	100	95.881	Cercocebus_atys
ENSCAFG00000016141	CASC3	100	90.896	ENSCLAG00000013730	CASC3	100	90.754	Chinchilla_lanigera
ENSCAFG00000016141	CASC3	100	95.881	ENSCSAG00000002777	CASC3	100	95.881	Chlorocebus_sabaeus
ENSCAFG00000016141	CASC3	99	75.385	ENSCPBG00000004750	CASC3	99	74.719	Chrysemys_picta_bellii
ENSCAFG00000016141	CASC3	100	95.597	ENSCANG00000008814	CASC3	100	95.597	Colobus_angolensis_palliatus
ENSCAFG00000016141	CASC3	100	93.599	ENSCGRG00001014706	Casc3	100	93.457	Cricetulus_griseus_chok1gshd
ENSCAFG00000016141	CASC3	100	86.202	ENSCGRG00000001952	Casc3	96	93.258	Cricetulus_griseus_crigri
ENSCAFG00000016141	CASC3	82	51.592	ENSCSEG00000010047	casc3	56	64.375	Cynoglossus_semilaevis
ENSCAFG00000016141	CASC3	100	95.590	ENSDNOG00000017249	CASC3	96	95.590	Dasypus_novemcinctus
ENSCAFG00000016141	CASC3	100	87.198	ENSETEG00000013720	CASC3	100	87.055	Echinops_telfairi
ENSCAFG00000016141	CASC3	99	37.237	ENSEBUG00000010654	casc3	98	36.472	Eptatretus_burgeri
ENSCAFG00000016141	CASC3	100	95.887	ENSEASG00005002909	CASC3	100	96.078	Equus_asinus_asinus
ENSCAFG00000016141	CASC3	100	97.155	ENSECAG00000019947	CASC3	88	97.155	Equus_caballus
ENSCAFG00000016141	CASC3	73	91.406	ENSEEUG00000014253	CASC3	100	91.406	Erinaceus_europaeus
ENSCAFG00000016141	CASC3	100	98.151	ENSFCAG00000014998	CASC3	100	98.151	Felis_catus
ENSCAFG00000016141	CASC3	88	74.335	ENSFALG00000000412	CASC3	98	73.701	Ficedula_albicollis
ENSCAFG00000016141	CASC3	93	87.823	ENSFDAG00000020696	CASC3	100	87.519	Fukomys_damarensis
ENSCAFG00000016141	CASC3	74	55.411	ENSFHEG00000015793	casc3	77	52.581	Fundulus_heteroclitus
ENSCAFG00000016141	CASC3	90	77.044	ENSGALG00000031813	CASC3	99	71.591	Gallus_gallus
ENSCAFG00000016141	CASC3	89	77.583	ENSGAGG00000008432	CASC3	94	78.191	Gopherus_agassizii
ENSCAFG00000016141	CASC3	100	95.164	ENSGGOG00000005067	CASC3	100	95.164	Gorilla_gorilla
ENSCAFG00000016141	CASC3	100	90.469	ENSHGLG00000012117	CASC3	100	90.469	Heterocephalus_glaber_female
ENSCAFG00000016141	CASC3	89	90.096	ENSHGLG00100002268	CASC3	99	90.048	Heterocephalus_glaber_male
ENSCAFG00000016141	CASC3	100	94.595	ENSSTOG00000006374	CASC3	100	94.595	Ictidomys_tridecemlineatus
ENSCAFG00000016141	CASC3	100	91.051	ENSJJAG00000023525	Casc3	100	91.193	Jaculus_jaculus
ENSCAFG00000016141	CASC3	75	50.459	ENSLBEG00000005435	casc3	57	60.112	Labrus_bergylta
ENSCAFG00000016141	CASC3	90	61.043	ENSLACG00000013200	CASC3	99	56.612	Latimeria_chalumnae
ENSCAFG00000016141	CASC3	73	73.786	ENSLOCG00000013518	casc3	71	70.874	Lepisosteus_oculatus
ENSCAFG00000016141	CASC3	100	94.168	ENSLAFG00000000606	CASC3	100	94.168	Loxodonta_africana
ENSCAFG00000016141	CASC3	100	95.881	ENSMFAG00000041496	CASC3	100	97.020	Macaca_fascicularis
ENSCAFG00000016141	CASC3	100	95.881	ENSMMUG00000045187	CASC3	100	95.881	Macaca_mulatta
ENSCAFG00000016141	CASC3	89	95.694	ENSMLEG00000029049	CASC3	98	95.673	Mandrillus_leucophaeus
ENSCAFG00000016141	CASC3	86	75.822	ENSMGAG00000013247	CASC3	99	74.309	Meleagris_gallopavo
ENSCAFG00000016141	CASC3	71	91.800	ENSMAUG00000006023	Casc3	80	91.434	Mesocricetus_auratus
ENSCAFG00000016141	CASC3	100	93.182	ENSMICG00000003321	CASC3	100	93.466	Microcebus_murinus
ENSCAFG00000016141	CASC3	100	92.603	ENSMOCG00000013644	Casc3	100	91.465	Microtus_ochrogaster
ENSCAFG00000016141	CASC3	100	78.723	ENSMODG00000013044	CASC3	92	79.716	Monodelphis_domestica
ENSCAFG00000016141	CASC3	100	91.750	MGP_CAROLIEiJ_G0017099	Casc3	100	90.754	Mus_caroli
ENSCAFG00000016141	CASC3	100	91.038	ENSMUSG00000078676	Casc3	100	90.043	Mus_musculus
ENSCAFG00000016141	CASC3	100	91.038	MGP_SPRETEiJ_G0017943	Casc3	100	90.043	Mus_spretus
ENSCAFG00000016141	CASC3	100	98.151	ENSMPUG00000014903	CASC3	100	98.151	Mustela_putorius_furo
ENSCAFG00000016141	CASC3	100	93.475	ENSMLUG00000010520	CASC3	100	93.759	Myotis_lucifugus
ENSCAFG00000016141	CASC3	100	92.034	ENSNGAG00000023121	Casc3	100	91.038	Nannospalax_galili
ENSCAFG00000016141	CASC3	100	94.452	ENSNLEG00000001598	CASC3	100	94.452	Nomascus_leucogenys
ENSCAFG00000016141	CASC3	83	93.827	ENSMEUG00000015662	CASC3	100	71.842	Notamacropus_eugenii
ENSCAFG00000016141	CASC3	73	90.625	ENSOPRG00000007240	-	79	100.000	Ochotona_princeps
ENSCAFG00000016141	CASC3	100	89.943	ENSODEG00000017858	CASC3	100	90.227	Octodon_degus
ENSCAFG00000016141	CASC3	79	54.276	ENSOANG00000003499	-	83	70.297	Ornithorhynchus_anatinus
ENSCAFG00000016141	CASC3	100	95.448	ENSOCUG00000002954	CASC3	100	94.879	Oryctolagus_cuniculus
ENSCAFG00000016141	CASC3	99	94.993	ENSOGAG00000034486	CASC3	98	94.993	Otolemur_garnettii
ENSCAFG00000016141	CASC3	100	96.159	ENSOARG00000013239	CASC3	100	96.159	Ovis_aries
ENSCAFG00000016141	CASC3	100	95.448	ENSPPAG00000035069	CASC3	100	95.448	Pan_paniscus
ENSCAFG00000016141	CASC3	100	98.151	ENSPPRG00000023670	CASC3	100	98.151	Panthera_pardus
ENSCAFG00000016141	CASC3	91	97.488	ENSPTIG00000010891	CASC3	91	97.488	Panthera_tigris_altaica
ENSCAFG00000016141	CASC3	100	95.881	ENSPANG00000021708	CASC3	100	95.881	Papio_anubis
ENSCAFG00000016141	CASC3	99	47.870	ENSPKIG00000023186	casc3	98	45.786	Paramormyrops_kingsleyae
ENSCAFG00000016141	CASC3	100	93.172	ENSPEMG00000009774	Casc3	100	92.745	Peromyscus_maniculatus_bairdii
ENSCAFG00000016141	CASC3	100	82.128	ENSPCIG00000025678	CASC3	100	83.404	Phascolarctos_cinereus
ENSCAFG00000016141	CASC3	90	48.834	ENSPFOG00000017632	casc3	100	47.441	Poecilia_formosa
ENSCAFG00000016141	CASC3	55	48.082	ENSPLAG00000005268	casc3	61	63.441	Poecilia_latipinna
ENSCAFG00000016141	CASC3	68	47.239	ENSPMEG00000010299	casc3	73	49.115	Poecilia_mexicana
ENSCAFG00000016141	CASC3	64	67.143	ENSPREG00000011856	casc3	82	51.706	Poecilia_reticulata
ENSCAFG00000016141	CASC3	100	93.883	ENSPPYG00000008467	CASC3	100	95.021	Pongo_abelii
ENSCAFG00000016141	CASC3	100	92.472	ENSPCOG00000008183	CASC3	100	93.608	Propithecus_coquereli
ENSCAFG00000016141	CASC3	100	96.586	ENSPVAG00000008556	CASC3	100	96.586	Pteropus_vampyrus
ENSCAFG00000016141	CASC3	91	94.702	ENSRNOG00000009716	Casc3	100	93.709	Rattus_norvegicus
ENSCAFG00000016141	CASC3	100	95.881	ENSRBIG00000033289	CASC3	100	94.602	Rhinopithecus_bieti
ENSCAFG00000016141	CASC3	100	95.881	ENSRROG00000022337	CASC3	100	95.881	Rhinopithecus_roxellana
ENSCAFG00000016141	CASC3	88	92.557	ENSSBOG00000031406	CASC3	98	94.337	Saimiri_boliviensis_boliviensis
ENSCAFG00000016141	CASC3	89	85.510	ENSSHAG00000013338	CASC3	99	85.120	Sarcophilus_harrisii
ENSCAFG00000016141	CASC3	65	67.361	ENSSMAG00000016096	casc3	56	61.728	Scophthalmus_maximus
ENSCAFG00000016141	CASC3	61	76.271	ENSSLDG00000020308	casc3	70	67.626	Seriola_lalandi_dorsalis
ENSCAFG00000016141	CASC3	84	82.997	ENSSARG00000010378	CASC3	98	82.997	Sorex_araneus
ENSCAFG00000016141	CASC3	89	95.048	ENSSSCG00000017477	CASC3	98	95.024	Sus_scrofa
ENSCAFG00000016141	CASC3	74	74.905	ENSTGUG00000002300	CASC3	99	74.095	Taeniopygia_guttata
ENSCAFG00000016141	CASC3	66	98.585	ENSTBEG00000017459	CASC3	67	98.585	Tupaia_belangeri
ENSCAFG00000016141	CASC3	86	86.424	ENSTTRG00000016896	CASC3	98	86.364	Tursiops_truncatus
ENSCAFG00000016141	CASC3	100	97.159	ENSUAMG00000015116	CASC3	100	97.705	Ursus_americanus
ENSCAFG00000016141	CASC3	89	97.444	ENSUMAG00000017697	CASC3	100	98.454	Ursus_maritimus
ENSCAFG00000016141	CASC3	75	100.000	ENSVPAG00000000799	CASC3	75	100.000	Vicugna_pacos
ENSCAFG00000016141	CASC3	100	99.573	ENSVVUG00000000997	CASC3	100	99.573	Vulpes_vulpes
ENSCAFG00000016141	CASC3	89	61.321	ENSXETG00000024395	casc3	98	58.263	Xenopus_tropicalis