EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000016264 (Gene tree)
Gene ID: 476067
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 32297 bases
Position: chr18:55064603-55096899
Accession: 39829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000023980	CPSF_A	PF03178.15	3.9e-86	1	1
ENSCAFP00000037259	CPSF_A	PF03178.15	1.3e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000049486	-	3499	-	ENSCAFP00000037259	1084 (aa)	-	J9NVR7
ENSCAFT00000025824	-	3423	XM_533275	ENSCAFP00000023980	1140 (aa)	XP_533275	E2R9E3

Gene Model

Click here to download ENSCAFG00000016264's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03420	Nucleotide excision repair	KEGG
cfa04120	Ubiquitin mediated proteolysis	KEGG
cfa05161	Hepatitis B	KEGG
cfa05170	Human immunodeficiency virus 1 infection	KEGG
cfa05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000016264's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000016264	DDB1	100	99.912	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSCAFG00000016264	DDB1	99	91.442	ENSAPOG00000005036	ddb1	99	91.531	Acanthochromis_polyacanthus
ENSCAFG00000016264	DDB1	100	100.000	ENSAMEG00000016518	DDB1	100	100.000	Ailuropoda_melanoleuca
ENSCAFG00000016264	DDB1	90	91.837	ENSACIG00000020624	ddb1	99	91.837	Amphilophus_citrinellus
ENSCAFG00000016264	DDB1	100	91.140	ENSAOCG00000003066	ddb1	100	91.140	Amphiprion_ocellaris
ENSCAFG00000016264	DDB1	100	91.228	ENSAPEG00000000092	ddb1	100	91.228	Amphiprion_percula
ENSCAFG00000016264	DDB1	99	91.336	ENSATEG00000020571	ddb1	98	91.336	Anabas_testudineus
ENSCAFG00000016264	DDB1	98	96.601	ENSAPLG00000007174	DDB1	99	96.533	Anas_platyrhynchos
ENSCAFG00000016264	DDB1	100	97.018	ENSACAG00000017758	DDB1	100	97.018	Anolis_carolinensis
ENSCAFG00000016264	DDB1	100	99.912	ENSANAG00000021878	DDB1	100	99.912	Aotus_nancymaae
ENSCAFG00000016264	DDB1	100	91.491	ENSACLG00000012401	ddb1	100	91.491	Astatotilapia_calliptera
ENSCAFG00000016264	DDB1	100	99.825	ENSBTAG00000021569	DDB1	93	99.825	Bos_taurus
ENSCAFG00000016264	DDB1	100	37.297	WBGene00010890	ddb-1	100	37.211	Caenorhabditis_elegans
ENSCAFG00000016264	DDB1	100	99.912	ENSCJAG00000019319	DDB1	100	99.912	Callithrix_jacchus
ENSCAFG00000016264	DDB1	100	100.000	ENSCAFG00020012722	DDB1	100	100.000	Canis_lupus_dingo
ENSCAFG00000016264	DDB1	100	99.825	ENSCHIG00000014969	DDB1	100	99.825	Capra_hircus
ENSCAFG00000016264	DDB1	100	99.211	ENSTSYG00000008027	DDB1	100	99.211	Carlito_syrichta
ENSCAFG00000016264	DDB1	98	99.196	ENSCAPG00000010786	DDB1	100	99.196	Cavia_aperea
ENSCAFG00000016264	DDB1	100	99.211	ENSCPOG00000009956	DDB1	100	99.211	Cavia_porcellus
ENSCAFG00000016264	DDB1	100	99.912	ENSCCAG00000035883	DDB1	100	99.912	Cebus_capucinus
ENSCAFG00000016264	DDB1	100	97.396	ENSCATG00000044495	DDB1	100	97.396	Cercocebus_atys
ENSCAFG00000016264	DDB1	100	99.298	ENSCLAG00000004126	DDB1	100	99.298	Chinchilla_lanigera
ENSCAFG00000016264	DDB1	100	99.912	ENSCSAG00000006392	DDB1	100	99.912	Chlorocebus_sabaeus
ENSCAFG00000016264	DDB1	88	92.803	ENSCHOG00000011377	DDB1	90	92.803	Choloepus_hoffmanni
ENSCAFG00000016264	DDB1	100	97.719	ENSCPBG00000017728	DDB1	100	97.719	Chrysemys_picta_bellii
ENSCAFG00000016264	DDB1	100	61.979	ENSCING00000007437	-	100	61.892	Ciona_intestinalis
ENSCAFG00000016264	DDB1	94	60.276	ENSCSAVG00000004783	-	100	60.276	Ciona_savignyi
ENSCAFG00000016264	DDB1	100	99.912	ENSCANG00000019948	DDB1	100	99.912	Colobus_angolensis_palliatus
ENSCAFG00000016264	DDB1	100	99.912	ENSCGRG00001016599	Ddb1	100	99.912	Cricetulus_griseus_chok1gshd
ENSCAFG00000016264	DDB1	100	99.912	ENSCGRG00000013427	Ddb1	100	99.912	Cricetulus_griseus_crigri
ENSCAFG00000016264	DDB1	98	91.235	ENSCSEG00000012499	ddb1	99	89.676	Cynoglossus_semilaevis
ENSCAFG00000016264	DDB1	99	91.620	ENSCVAG00000019531	ddb1	99	91.620	Cyprinodon_variegatus
ENSCAFG00000016264	DDB1	100	88.354	ENSDARG00000074431	ddb1	100	88.472	Danio_rerio
ENSCAFG00000016264	DDB1	100	98.716	ENSDNOG00000014884	DDB1	99	98.716	Dasypus_novemcinctus
ENSCAFG00000016264	DDB1	84	100.000	ENSDORG00000000127	Ddb1	100	100.000	Dipodomys_ordii
ENSCAFG00000016264	DDB1	100	61.048	FBgn0260962	pic	100	60.839	Drosophila_melanogaster
ENSCAFG00000016264	DDB1	71	100.000	ENSETEG00000001053	-	71	100.000	Echinops_telfairi
ENSCAFG00000016264	DDB1	82	85.039	ENSEBUG00000014593	ddb1	97	85.039	Eptatretus_burgeri
ENSCAFG00000016264	DDB1	100	99.825	ENSEASG00005008184	DDB1	100	99.825	Equus_asinus_asinus
ENSCAFG00000016264	DDB1	100	99.737	ENSECAG00000012136	DDB1	100	99.737	Equus_caballus
ENSCAFG00000016264	DDB1	89	97.643	ENSEEUG00000003194	DDB1	85	97.643	Erinaceus_europaeus
ENSCAFG00000016264	DDB1	100	91.228	ENSELUG00000023868	ddb1	100	91.228	Esox_lucius
ENSCAFG00000016264	DDB1	100	100.000	ENSFCAG00000029716	DDB1	100	100.000	Felis_catus
ENSCAFG00000016264	DDB1	100	96.938	ENSFALG00000011981	DDB1	100	96.938	Ficedula_albicollis
ENSCAFG00000016264	DDB1	100	99.211	ENSFDAG00000005128	DDB1	100	99.211	Fukomys_damarensis
ENSCAFG00000016264	DDB1	88	95.109	ENSFHEG00000022133	ddb1	98	90.670	Fundulus_heteroclitus
ENSCAFG00000016264	DDB1	83	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSCAFG00000016264	DDB1	100	97.105	ENSGALG00000042333	DDB1	100	97.105	Gallus_gallus
ENSCAFG00000016264	DDB1	99	91.434	ENSGAFG00000013142	ddb1	99	91.434	Gambusia_affinis
ENSCAFG00000016264	DDB1	99	91.589	ENSGACG00000017182	ddb1	100	90.651	Gasterosteus_aculeatus
ENSCAFG00000016264	DDB1	95	97.786	ENSGAGG00000014124	DDB1	100	97.786	Gopherus_agassizii
ENSCAFG00000016264	DDB1	100	99.912	ENSGGOG00000004052	DDB1	100	99.912	Gorilla_gorilla
ENSCAFG00000016264	DDB1	100	91.491	ENSHBUG00000008873	ddb1	100	91.491	Haplochromis_burtoni
ENSCAFG00000016264	DDB1	100	99.123	ENSHGLG00000018430	DDB1	100	99.123	Heterocephalus_glaber_female
ENSCAFG00000016264	DDB1	100	98.070	ENSHGLG00100014475	DDB1	100	98.070	Heterocephalus_glaber_male
ENSCAFG00000016264	DDB1	99	91.341	ENSHCOG00000018670	ddb1	98	91.341	Hippocampus_comes
ENSCAFG00000016264	DDB1	100	90.526	ENSIPUG00000005612	DDB1	100	90.526	Ictalurus_punctatus
ENSCAFG00000016264	DDB1	100	99.912	ENSSTOG00000007552	DDB1	100	99.912	Ictidomys_tridecemlineatus
ENSCAFG00000016264	DDB1	100	99.737	ENSJJAG00000017769	Ddb1	100	99.737	Jaculus_jaculus
ENSCAFG00000016264	DDB1	99	91.527	ENSKMAG00000002315	ddb1	99	91.527	Kryptolebias_marmoratus
ENSCAFG00000016264	DDB1	89	91.503	ENSLBEG00000017065	ddb1	99	91.503	Labrus_bergylta
ENSCAFG00000016264	DDB1	100	93.608	ENSLACG00000017611	DDB1	100	93.608	Latimeria_chalumnae
ENSCAFG00000016264	DDB1	92	83.333	ENSLOCG00000000012	ddb1	100	83.333	Lepisosteus_oculatus
ENSCAFG00000016264	DDB1	100	99.737	ENSLAFG00000011513	DDB1	100	99.737	Loxodonta_africana
ENSCAFG00000016264	DDB1	100	99.912	ENSMFAG00000042035	DDB1	100	99.912	Macaca_fascicularis
ENSCAFG00000016264	DDB1	99	99.912	ENSMMUG00000002691	DDB1	99	99.912	Macaca_mulatta
ENSCAFG00000016264	DDB1	100	99.912	ENSMNEG00000031559	DDB1	100	99.912	Macaca_nemestrina
ENSCAFG00000016264	DDB1	100	99.912	ENSMLEG00000044136	DDB1	100	99.912	Mandrillus_leucophaeus
ENSCAFG00000016264	DDB1	100	91.491	ENSMAMG00000014372	ddb1	100	91.491	Mastacembelus_armatus
ENSCAFG00000016264	DDB1	100	91.404	ENSMZEG00005013835	ddb1	100	91.404	Maylandia_zebra
ENSCAFG00000016264	DDB1	94	96.462	ENSMGAG00000004990	DDB1	100	96.462	Meleagris_gallopavo
ENSCAFG00000016264	DDB1	100	99.912	ENSMAUG00000012926	Ddb1	100	99.912	Mesocricetus_auratus
ENSCAFG00000016264	DDB1	100	99.912	ENSMICG00000013703	DDB1	100	99.912	Microcebus_murinus
ENSCAFG00000016264	DDB1	100	99.649	ENSMOCG00000020499	Ddb1	100	99.649	Microtus_ochrogaster
ENSCAFG00000016264	DDB1	90	91.837	ENSMMOG00000001758	ddb1	99	91.837	Mola_mola
ENSCAFG00000016264	DDB1	100	89.273	ENSMODG00000020353	DDB1	100	89.273	Monodelphis_domestica
ENSCAFG00000016264	DDB1	100	91.491	ENSMALG00000014071	ddb1	100	91.491	Monopterus_albus
ENSCAFG00000016264	DDB1	100	99.825	MGP_CAROLIEiJ_G0022695	Ddb1	100	99.825	Mus_caroli
ENSCAFG00000016264	DDB1	100	99.737	ENSMUSG00000024740	Ddb1	100	99.737	Mus_musculus
ENSCAFG00000016264	DDB1	100	99.825	MGP_PahariEiJ_G0014189	Ddb1	100	99.825	Mus_pahari
ENSCAFG00000016264	DDB1	100	99.825	MGP_SPRETEiJ_G0023609	Ddb1	100	99.825	Mus_spretus
ENSCAFG00000016264	DDB1	100	96.667	ENSMPUG00000014200	DDB1	100	96.667	Mustela_putorius_furo
ENSCAFG00000016264	DDB1	100	99.386	ENSMLUG00000013232	DDB1	100	99.386	Myotis_lucifugus
ENSCAFG00000016264	DDB1	100	99.474	ENSNGAG00000009384	Ddb1	100	99.474	Nannospalax_galili
ENSCAFG00000016264	DDB1	100	91.579	ENSNBRG00000019581	ddb1	100	91.579	Neolamprologus_brichardi
ENSCAFG00000016264	DDB1	100	96.788	ENSNLEG00000002022	DDB1	100	96.788	Nomascus_leucogenys
ENSCAFG00000016264	DDB1	91	99.648	ENSMEUG00000001099	DDB1	93	99.648	Notamacropus_eugenii
ENSCAFG00000016264	DDB1	90	91.077	ENSOPRG00000008254	DDB1	90	91.077	Ochotona_princeps
ENSCAFG00000016264	DDB1	100	99.123	ENSODEG00000002419	DDB1	100	99.123	Octodon_degus
ENSCAFG00000016264	DDB1	100	91.491	ENSONIG00000005804	ddb1	100	91.491	Oreochromis_niloticus
ENSCAFG00000016264	DDB1	91	98.159	ENSOANG00000004897	DDB1	100	98.159	Ornithorhynchus_anatinus
ENSCAFG00000016264	DDB1	100	99.912	ENSOCUG00000001667	DDB1	100	99.912	Oryctolagus_cuniculus
ENSCAFG00000016264	DDB1	99	91.256	ENSORLG00000001399	ddb1	98	91.162	Oryzias_latipes
ENSCAFG00000016264	DDB1	99	91.163	ENSORLG00020001277	ddb1	96	91.163	Oryzias_latipes_hni
ENSCAFG00000016264	DDB1	99	91.256	ENSORLG00015002080	ddb1	99	91.256	Oryzias_latipes_hsok
ENSCAFG00000016264	DDB1	99	91.713	ENSOMEG00000006181	ddb1	99	89.790	Oryzias_melastigma
ENSCAFG00000016264	DDB1	100	99.737	ENSOGAG00000016103	DDB1	100	99.737	Otolemur_garnettii
ENSCAFG00000016264	DDB1	99	99.822	ENSOARG00000011716	DDB1	98	99.822	Ovis_aries
ENSCAFG00000016264	DDB1	100	99.912	ENSPPAG00000035343	DDB1	100	99.912	Pan_paniscus
ENSCAFG00000016264	DDB1	100	100.000	ENSPPRG00000013300	DDB1	100	100.000	Panthera_pardus
ENSCAFG00000016264	DDB1	98	100.000	ENSPTIG00000006909	DDB1	98	100.000	Panthera_tigris_altaica
ENSCAFG00000016264	DDB1	100	99.912	ENSPTRG00000003737	DDB1	100	99.912	Pan_troglodytes
ENSCAFG00000016264	DDB1	100	99.912	ENSPANG00000000242	DDB1	100	99.912	Papio_anubis
ENSCAFG00000016264	DDB1	99	90.859	ENSPKIG00000019213	ddb1	95	90.859	Paramormyrops_kingsleyae
ENSCAFG00000016264	DDB1	98	97.064	ENSPSIG00000013275	DDB1	100	97.064	Pelodiscus_sinensis
ENSCAFG00000016264	DDB1	90	91.531	ENSPMGG00000021179	ddb1	99	91.531	Periophthalmus_magnuspinnatus
ENSCAFG00000016264	DDB1	100	99.912	ENSPEMG00000012241	Ddb1	100	99.912	Peromyscus_maniculatus_bairdii
ENSCAFG00000016264	DDB1	94	86.837	ENSPMAG00000008479	ddb1	100	86.837	Petromyzon_marinus
ENSCAFG00000016264	DDB1	100	99.035	ENSPCIG00000002643	DDB1	100	99.035	Phascolarctos_cinereus
ENSCAFG00000016264	DDB1	100	90.885	ENSPFOG00000002768	ddb1	100	90.885	Poecilia_formosa
ENSCAFG00000016264	DDB1	100	90.702	ENSPLAG00000017227	ddb1	100	90.702	Poecilia_latipinna
ENSCAFG00000016264	DDB1	100	90.702	ENSPMEG00000011398	ddb1	100	90.702	Poecilia_mexicana
ENSCAFG00000016264	DDB1	99	91.628	ENSPREG00000004440	ddb1	98	91.628	Poecilia_reticulata
ENSCAFG00000016264	DDB1	100	94.939	ENSPPYG00000003193	DDB1	100	94.939	Pongo_abelii
ENSCAFG00000016264	DDB1	85	99.552	ENSPCAG00000011040	DDB1	85	99.552	Procavia_capensis
ENSCAFG00000016264	DDB1	100	98.336	ENSPCOG00000015176	DDB1	100	98.336	Propithecus_coquereli
ENSCAFG00000016264	DDB1	100	99.825	ENSPVAG00000003847	DDB1	100	99.825	Pteropus_vampyrus
ENSCAFG00000016264	DDB1	99	91.527	ENSPNAG00000006635	ddb1	97	91.527	Pygocentrus_nattereri
ENSCAFG00000016264	DDB1	100	99.825	ENSRNOG00000020715	Ddb1	100	99.825	Rattus_norvegicus
ENSCAFG00000016264	DDB1	100	99.912	ENSRBIG00000033611	DDB1	100	99.912	Rhinopithecus_bieti
ENSCAFG00000016264	DDB1	100	99.912	ENSRROG00000041407	DDB1	100	99.912	Rhinopithecus_roxellana
ENSCAFG00000016264	DDB1	100	99.825	ENSSBOG00000019775	DDB1	100	99.825	Saimiri_boliviensis_boliviensis
ENSCAFG00000016264	DDB1	94	97.009	ENSSHAG00000011600	DDB1	100	97.009	Sarcophilus_harrisii
ENSCAFG00000016264	DDB1	99	91.814	ENSSFOG00015011151	ddb1	97	91.814	Scleropages_formosus
ENSCAFG00000016264	DDB1	100	91.053	ENSSMAG00000009495	ddb1	100	91.053	Scophthalmus_maximus
ENSCAFG00000016264	DDB1	100	91.404	ENSSDUG00000004642	ddb1	100	91.404	Seriola_dumerili
ENSCAFG00000016264	DDB1	100	91.404	ENSSLDG00000015804	ddb1	100	91.404	Seriola_lalandi_dorsalis
ENSCAFG00000016264	DDB1	71	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSCAFG00000016264	DDB1	100	97.895	ENSSPUG00000019338	DDB1	100	97.895	Sphenodon_punctatus
ENSCAFG00000016264	DDB1	99	91.907	ENSSPAG00000009888	ddb1	99	91.907	Stegastes_partitus
ENSCAFG00000016264	DDB1	100	98.947	ENSSSCG00000013094	DDB1	100	98.947	Sus_scrofa
ENSCAFG00000016264	DDB1	100	97.105	ENSTGUG00000006414	DDB1	100	97.105	Taeniopygia_guttata
ENSCAFG00000016264	DDB1	99	90.503	ENSTRUG00000016682	ddb1	99	90.503	Takifugu_rubripes
ENSCAFG00000016264	DDB1	88	85.030	ENSTNIG00000009565	ddb1	99	85.030	Tetraodon_nigroviridis
ENSCAFG00000016264	DDB1	92	94.909	ENSTTRG00000011055	DDB1	94	94.909	Tursiops_truncatus
ENSCAFG00000016264	DDB1	100	100.000	ENSUAMG00000017793	DDB1	94	100.000	Ursus_americanus
ENSCAFG00000016264	DDB1	100	100.000	ENSUMAG00000011788	DDB1	99	100.000	Ursus_maritimus
ENSCAFG00000016264	DDB1	90	100.000	ENSVPAG00000007963	DDB1	92	100.000	Vicugna_pacos
ENSCAFG00000016264	DDB1	100	99.912	ENSVVUG00000004987	DDB1	100	99.912	Vulpes_vulpes
ENSCAFG00000016264	DDB1	100	93.269	ENSXETG00000008820	ddb1	100	93.269	Xenopus_tropicalis
ENSCAFG00000016264	DDB1	90	91.327	ENSXCOG00000013956	ddb1	99	91.327	Xiphophorus_couchianus
ENSCAFG00000016264	DDB1	99	91.434	ENSXMAG00000000022	ddb1	99	91.434	Xiphophorus_maculatus