EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000016459 (Gene tree)
Gene ID: -
Gene Symbol: LSM8
Alias: -
Full Name: LSM8 homolog%2C U6 small nuclear RNA associated
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 297 bases
Position: chr18:55715093-55715389
Accession: 49756
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000024222	LSM	PF01423.22	2.4e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000026087	-	297	XM_005631704	ENSCAFP00000024222	99 (aa)	XP_005631761	E2R3V2

Gene Model

Click here to download ENSCAFG00000016459's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000016459's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000016459	LSM8	71	35.526	ENSCAFG00000019409	LSM7	72	35.526
ENSCAFG00000016459	LSM8	89	34.091	ENSCAFG00000006113	LSM1	65	34.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000016459	LSM8	96	100.000	ENSG00000128534	LSM8	100	100.000	Homo_sapiens
ENSCAFG00000016459	LSM8	95	93.617	ENSAPOG00000008649	lsm8	98	93.617	Acanthochromis_polyacanthus
ENSCAFG00000016459	LSM8	96	100.000	ENSAMEG00000001162	LSM8	99	100.000	Ailuropoda_melanoleuca
ENSCAFG00000016459	LSM8	74	98.630	ENSACIG00000014694	lsm8	97	98.630	Amphilophus_citrinellus
ENSCAFG00000016459	LSM8	95	93.617	ENSAOCG00000013926	lsm8	98	93.617	Amphiprion_ocellaris
ENSCAFG00000016459	LSM8	95	93.617	ENSAPEG00000023502	lsm8	98	93.617	Amphiprion_percula
ENSCAFG00000016459	LSM8	74	98.630	ENSATEG00000023432	lsm8	97	98.630	Anabas_testudineus
ENSCAFG00000016459	LSM8	90	92.391	ENSAPLG00000005115	LSM8	93	92.391	Anas_platyrhynchos
ENSCAFG00000016459	LSM8	96	100.000	ENSANAG00000027771	LSM8	99	100.000	Aotus_nancymaae
ENSCAFG00000016459	LSM8	95	93.617	ENSACLG00000011253	lsm8	98	93.617	Astatotilapia_calliptera
ENSCAFG00000016459	LSM8	95	95.745	ENSAMXG00000042902	lsm8	98	95.745	Astyanax_mexicanus
ENSCAFG00000016459	LSM8	96	100.000	ENSBTAG00000012649	LSM8	99	100.000	Bos_taurus
ENSCAFG00000016459	LSM8	95	58.511	WBGene00003082	lsm-8	96	58.511	Caenorhabditis_elegans
ENSCAFG00000016459	LSM8	96	100.000	ENSCJAG00000046406	LSM8	99	100.000	Callithrix_jacchus
ENSCAFG00000016459	LSM8	86	98.824	ENSCAFG00020012800	-	66	98.824	Canis_lupus_dingo
ENSCAFG00000016459	LSM8	96	100.000	ENSCAFG00020007643	-	99	100.000	Canis_lupus_dingo
ENSCAFG00000016459	LSM8	85	100.000	ENSCHIG00000014201	LSM8	89	100.000	Capra_hircus
ENSCAFG00000016459	LSM8	96	100.000	ENSTSYG00000032434	LSM8	99	100.000	Carlito_syrichta
ENSCAFG00000016459	LSM8	74	98.630	ENSCAPG00000008253	LSM8	99	98.630	Cavia_aperea
ENSCAFG00000016459	LSM8	96	100.000	ENSCPOG00000035673	LSM8	99	100.000	Cavia_porcellus
ENSCAFG00000016459	LSM8	96	100.000	ENSCCAG00000021329	LSM8	99	100.000	Cebus_capucinus
ENSCAFG00000016459	LSM8	96	100.000	ENSCATG00000045302	LSM8	99	100.000	Cercocebus_atys
ENSCAFG00000016459	LSM8	96	100.000	ENSCLAG00000003726	LSM8	99	100.000	Chinchilla_lanigera
ENSCAFG00000016459	LSM8	96	95.789	ENSCSAG00000019007	-	99	95.789	Chlorocebus_sabaeus
ENSCAFG00000016459	LSM8	96	100.000	ENSCSAG00000010802	-	99	100.000	Chlorocebus_sabaeus
ENSCAFG00000016459	LSM8	85	100.000	ENSCPBG00000008154	LSM8	86	100.000	Chrysemys_picta_bellii
ENSCAFG00000016459	LSM8	95	75.532	ENSCING00000024877	-	98	75.532	Ciona_intestinalis
ENSCAFG00000016459	LSM8	96	100.000	ENSCANG00000040728	LSM8	99	100.000	Colobus_angolensis_palliatus
ENSCAFG00000016459	LSM8	96	100.000	ENSCGRG00001000450	Lsm8	99	100.000	Cricetulus_griseus_chok1gshd
ENSCAFG00000016459	LSM8	85	100.000	ENSCGRG00000005587	Lsm8	99	100.000	Cricetulus_griseus_crigri
ENSCAFG00000016459	LSM8	95	81.915	ENSCSEG00000004164	lsm8	98	81.915	Cynoglossus_semilaevis
ENSCAFG00000016459	LSM8	95	92.553	ENSCVAG00000020547	lsm8	98	92.553	Cyprinodon_variegatus
ENSCAFG00000016459	LSM8	95	92.553	ENSDARG00000091656	lsm8	98	92.553	Danio_rerio
ENSCAFG00000016459	LSM8	96	100.000	ENSDNOG00000034613	LSM8	99	100.000	Dasypus_novemcinctus
ENSCAFG00000016459	LSM8	96	100.000	ENSDORG00000027868	Lsm8	99	100.000	Dipodomys_ordii
ENSCAFG00000016459	LSM8	93	69.565	FBgn0035271	CG2021	97	69.565	Drosophila_melanogaster
ENSCAFG00000016459	LSM8	95	100.000	ENSETEG00000011594	LSM8	98	100.000	Echinops_telfairi
ENSCAFG00000016459	LSM8	73	93.056	ENSEBUG00000012017	lsm8	97	93.056	Eptatretus_burgeri
ENSCAFG00000016459	LSM8	100	100.000	ENSEASG00005008932	LSM8	64	100.000	Equus_asinus_asinus
ENSCAFG00000016459	LSM8	99	88.776	ENSECAG00000024025	LSM8	87	88.776	Equus_caballus
ENSCAFG00000016459	LSM8	95	92.553	ENSELUG00000010138	lsm8	98	92.553	Esox_lucius
ENSCAFG00000016459	LSM8	96	100.000	ENSFCAG00000036620	-	99	100.000	Felis_catus
ENSCAFG00000016459	LSM8	83	74.390	ENSFCAG00000044794	-	83	74.390	Felis_catus
ENSCAFG00000016459	LSM8	95	100.000	ENSFALG00000010023	LSM8	98	100.000	Ficedula_albicollis
ENSCAFG00000016459	LSM8	96	100.000	ENSFDAG00000019530	LSM8	99	100.000	Fukomys_damarensis
ENSCAFG00000016459	LSM8	95	93.617	ENSFHEG00000013729	lsm8	98	93.617	Fundulus_heteroclitus
ENSCAFG00000016459	LSM8	95	100.000	ENSGALG00000009110	LSM8	98	100.000	Gallus_gallus
ENSCAFG00000016459	LSM8	95	92.553	ENSGAFG00000001135	lsm8	98	92.553	Gambusia_affinis
ENSCAFG00000016459	LSM8	96	100.000	ENSGAGG00000017366	LSM8	99	100.000	Gopherus_agassizii
ENSCAFG00000016459	LSM8	96	100.000	ENSGGOG00000041883	LSM8	99	100.000	Gorilla_gorilla
ENSCAFG00000016459	LSM8	95	93.617	ENSHBUG00000003646	lsm8	98	93.617	Haplochromis_burtoni
ENSCAFG00000016459	LSM8	96	94.737	ENSHGLG00000019782	-	99	94.737	Heterocephalus_glaber_female
ENSCAFG00000016459	LSM8	69	100.000	ENSHGLG00000001988	-	99	100.000	Heterocephalus_glaber_female
ENSCAFG00000016459	LSM8	96	96.842	ENSHGLG00100003934	-	95	96.842	Heterocephalus_glaber_male
ENSCAFG00000016459	LSM8	96	95.789	ENSHGLG00100012166	-	99	95.789	Heterocephalus_glaber_male
ENSCAFG00000016459	LSM8	95	92.553	ENSHCOG00000005037	lsm8	98	92.553	Hippocampus_comes
ENSCAFG00000016459	LSM8	95	95.745	ENSIPUG00000019811	NAA38	98	95.745	Ictalurus_punctatus
ENSCAFG00000016459	LSM8	96	100.000	ENSSTOG00000009039	LSM8	99	100.000	Ictidomys_tridecemlineatus
ENSCAFG00000016459	LSM8	88	87.356	ENSSTOG00000034801	-	81	87.356	Ictidomys_tridecemlineatus
ENSCAFG00000016459	LSM8	96	100.000	ENSJJAG00000009031	Lsm8	98	100.000	Jaculus_jaculus
ENSCAFG00000016459	LSM8	95	93.617	ENSKMAG00000018983	lsm8	98	93.617	Kryptolebias_marmoratus
ENSCAFG00000016459	LSM8	95	95.745	ENSLACG00000010231	LSM8	98	95.745	Latimeria_chalumnae
ENSCAFG00000016459	LSM8	95	94.681	ENSLOCG00000015580	lsm8	98	94.681	Lepisosteus_oculatus
ENSCAFG00000016459	LSM8	96	98.958	ENSLAFG00000011242	LSM8	99	98.958	Loxodonta_africana
ENSCAFG00000016459	LSM8	96	95.789	ENSMFAG00000013044	-	99	95.789	Macaca_fascicularis
ENSCAFG00000016459	LSM8	96	100.000	ENSMFAG00000035798	LSM8	99	100.000	Macaca_fascicularis
ENSCAFG00000016459	LSM8	100	98.990	ENSMMUG00000046401	LSM8	99	97.260	Macaca_mulatta
ENSCAFG00000016459	LSM8	96	100.000	ENSMNEG00000036764	-	99	100.000	Macaca_nemestrina
ENSCAFG00000016459	LSM8	75	95.946	ENSMNEG00000011141	-	99	95.946	Macaca_nemestrina
ENSCAFG00000016459	LSM8	96	100.000	ENSMLEG00000035828	-	99	100.000	Mandrillus_leucophaeus
ENSCAFG00000016459	LSM8	96	84.211	ENSMLEG00000039324	-	99	84.211	Mandrillus_leucophaeus
ENSCAFG00000016459	LSM8	74	98.630	ENSMAMG00000018839	lsm8	97	98.630	Mastacembelus_armatus
ENSCAFG00000016459	LSM8	95	93.617	ENSMZEG00005019138	lsm8	98	93.617	Maylandia_zebra
ENSCAFG00000016459	LSM8	95	100.000	ENSMGAG00000008808	LSM8	98	100.000	Meleagris_gallopavo
ENSCAFG00000016459	LSM8	96	81.053	ENSMAUG00000015356	-	99	81.053	Mesocricetus_auratus
ENSCAFG00000016459	LSM8	90	97.753	ENSMAUG00000015721	-	94	97.753	Mesocricetus_auratus
ENSCAFG00000016459	LSM8	72	92.958	ENSMAUG00000020287	-	99	90.411	Mesocricetus_auratus
ENSCAFG00000016459	LSM8	96	100.000	ENSMICG00000042730	LSM8	99	100.000	Microcebus_murinus
ENSCAFG00000016459	LSM8	96	100.000	ENSMOCG00000001688	Lsm8	99	100.000	Microtus_ochrogaster
ENSCAFG00000016459	LSM8	74	98.630	ENSMMOG00000006046	lsm8	97	98.630	Mola_mola
ENSCAFG00000016459	LSM8	74	86.667	ENSMODG00000015729	LSM8	96	86.667	Monodelphis_domestica
ENSCAFG00000016459	LSM8	95	94.681	ENSMALG00000000405	lsm8	98	94.681	Monopterus_albus
ENSCAFG00000016459	LSM8	96	100.000	MGP_CAROLIEiJ_G0028125	-	99	100.000	Mus_caroli
ENSCAFG00000016459	LSM8	96	100.000	ENSMUSG00000044155	Lsm8	99	100.000	Mus_musculus
ENSCAFG00000016459	LSM8	96	100.000	MGP_PahariEiJ_G0021881	Lsm8	99	100.000	Mus_pahari
ENSCAFG00000016459	LSM8	96	100.000	MGP_SPRETEiJ_G0029125	-	99	100.000	Mus_spretus
ENSCAFG00000016459	LSM8	96	100.000	ENSMLUG00000006837	-	99	100.000	Myotis_lucifugus
ENSCAFG00000016459	LSM8	96	98.947	ENSMLUG00000027762	-	99	98.947	Myotis_lucifugus
ENSCAFG00000016459	LSM8	96	100.000	ENSNGAG00000016554	Lsm8	99	100.000	Nannospalax_galili
ENSCAFG00000016459	LSM8	95	93.617	ENSNBRG00000014441	lsm8	98	93.617	Neolamprologus_brichardi
ENSCAFG00000016459	LSM8	96	100.000	ENSNLEG00000011768	LSM8	99	100.000	Nomascus_leucogenys
ENSCAFG00000016459	LSM8	96	88.421	ENSMEUG00000007801	LSM8	99	88.421	Notamacropus_eugenii
ENSCAFG00000016459	LSM8	85	100.000	ENSOPRG00000014809	LSM8	99	100.000	Ochotona_princeps
ENSCAFG00000016459	LSM8	87	82.558	ENSODEG00000020290	-	100	82.558	Octodon_degus
ENSCAFG00000016459	LSM8	96	100.000	ENSODEG00000000418	-	99	100.000	Octodon_degus
ENSCAFG00000016459	LSM8	96	98.947	ENSOANG00000014536	LSM8	99	98.947	Ornithorhynchus_anatinus
ENSCAFG00000016459	LSM8	96	98.958	ENSOCUG00000017359	LSM8	99	98.958	Oryctolagus_cuniculus
ENSCAFG00000016459	LSM8	95	82.979	ENSORLG00000017432	lsm8	98	82.979	Oryzias_latipes
ENSCAFG00000016459	LSM8	95	82.979	ENSORLG00020004376	lsm8	98	82.979	Oryzias_latipes_hni
ENSCAFG00000016459	LSM8	95	93.617	ENSORLG00015003757	lsm8	98	93.617	Oryzias_latipes_hsok
ENSCAFG00000016459	LSM8	95	81.915	ENSOMEG00000022509	lsm8	98	81.915	Oryzias_melastigma
ENSCAFG00000016459	LSM8	96	100.000	ENSOGAG00000013377	LSM8	99	100.000	Otolemur_garnettii
ENSCAFG00000016459	LSM8	96	100.000	ENSOARG00000017974	LSM8	99	100.000	Ovis_aries
ENSCAFG00000016459	LSM8	75	100.000	ENSPPAG00000043228	-	99	100.000	Pan_paniscus
ENSCAFG00000016459	LSM8	96	100.000	ENSPPRG00000006444	LSM8	99	100.000	Panthera_pardus
ENSCAFG00000016459	LSM8	96	100.000	ENSPTIG00000004722	LSM8	99	100.000	Panthera_tigris_altaica
ENSCAFG00000016459	LSM8	75	100.000	ENSPTRG00000046596	-	99	100.000	Pan_troglodytes
ENSCAFG00000016459	LSM8	96	100.000	ENSPANG00000035470	-	99	100.000	Papio_anubis
ENSCAFG00000016459	LSM8	96	93.684	ENSPANG00000019395	-	99	93.684	Papio_anubis
ENSCAFG00000016459	LSM8	84	98.795	ENSPKIG00000006092	lsm8	84	98.795	Paramormyrops_kingsleyae
ENSCAFG00000016459	LSM8	75	100.000	ENSPSIG00000017054	LSM8	99	100.000	Pelodiscus_sinensis
ENSCAFG00000016459	LSM8	74	98.630	ENSPMGG00000016442	lsm8	97	98.630	Periophthalmus_magnuspinnatus
ENSCAFG00000016459	LSM8	74	97.260	ENSPEMG00000009153	Lsm8	99	97.260	Peromyscus_maniculatus_bairdii
ENSCAFG00000016459	LSM8	94	100.000	ENSPCIG00000021467	LSM8	98	100.000	Phascolarctos_cinereus
ENSCAFG00000016459	LSM8	95	92.553	ENSPFOG00000012340	lsm8	98	92.553	Poecilia_formosa
ENSCAFG00000016459	LSM8	84	95.181	ENSPLAG00000000516	lsm8	86	95.181	Poecilia_latipinna
ENSCAFG00000016459	LSM8	95	92.553	ENSPMEG00000022567	lsm8	98	92.553	Poecilia_mexicana
ENSCAFG00000016459	LSM8	72	85.897	ENSPREG00000005527	lsm8	70	85.897	Poecilia_reticulata
ENSCAFG00000016459	LSM8	96	100.000	ENSPPYG00000017942	LSM8	99	100.000	Pongo_abelii
ENSCAFG00000016459	LSM8	96	100.000	ENSPCOG00000003309	-	99	100.000	Propithecus_coquereli
ENSCAFG00000016459	LSM8	96	77.895	ENSPCOG00000017982	-	99	77.895	Propithecus_coquereli
ENSCAFG00000016459	LSM8	85	98.810	ENSPVAG00000000990	LSM8	99	98.810	Pteropus_vampyrus
ENSCAFG00000016459	LSM8	95	93.617	ENSPNYG00000011448	lsm8	98	93.617	Pundamilia_nyererei
ENSCAFG00000016459	LSM8	95	95.745	ENSPNAG00000010252	lsm8	98	95.745	Pygocentrus_nattereri
ENSCAFG00000016459	LSM8	96	100.000	ENSRNOG00000058677	Lsm8	99	100.000	Rattus_norvegicus
ENSCAFG00000016459	LSM8	96	100.000	ENSRBIG00000032851	LSM8	99	100.000	Rhinopithecus_bieti
ENSCAFG00000016459	LSM8	96	100.000	ENSRROG00000039618	LSM8	99	100.000	Rhinopithecus_roxellana
ENSCAFG00000016459	LSM8	96	100.000	ENSSBOG00000023223	LSM8	99	100.000	Saimiri_boliviensis_boliviensis
ENSCAFG00000016459	LSM8	96	100.000	ENSSHAG00000018435	-	99	100.000	Sarcophilus_harrisii
ENSCAFG00000016459	LSM8	95	92.553	ENSSFOG00015004412	lsm8	98	92.553	Scleropages_formosus
ENSCAFG00000016459	LSM8	75	97.297	ENSSMAG00000009458	lsm8	99	97.297	Scophthalmus_maximus
ENSCAFG00000016459	LSM8	95	93.617	ENSSDUG00000014702	lsm8	98	93.617	Seriola_dumerili
ENSCAFG00000016459	LSM8	74	98.630	ENSSLDG00000016870	lsm8	97	98.630	Seriola_lalandi_dorsalis
ENSCAFG00000016459	LSM8	72	100.000	ENSSARG00000009628	-	99	100.000	Sorex_araneus
ENSCAFG00000016459	LSM8	96	100.000	ENSSPUG00000017419	LSM8	99	100.000	Sphenodon_punctatus
ENSCAFG00000016459	LSM8	95	93.617	ENSSPAG00000021422	lsm8	98	93.617	Stegastes_partitus
ENSCAFG00000016459	LSM8	96	100.000	ENSSSCG00000021652	LSM8	99	100.000	Sus_scrofa
ENSCAFG00000016459	LSM8	95	98.936	ENSTGUG00000004730	-	98	98.936	Taeniopygia_guttata
ENSCAFG00000016459	LSM8	95	97.872	ENSTGUG00000016823	-	98	97.872	Taeniopygia_guttata
ENSCAFG00000016459	LSM8	95	93.617	ENSTRUG00000025192	lsm8	98	93.617	Takifugu_rubripes
ENSCAFG00000016459	LSM8	95	93.617	ENSTNIG00000002864	lsm8	98	93.617	Tetraodon_nigroviridis
ENSCAFG00000016459	LSM8	96	100.000	ENSTTRG00000001023	LSM8	99	100.000	Tursiops_truncatus
ENSCAFG00000016459	LSM8	88	96.552	ENSUAMG00000006943	-	91	96.552	Ursus_americanus
ENSCAFG00000016459	LSM8	88	96.552	ENSUMAG00000003073	LSM8	93	96.552	Ursus_maritimus
ENSCAFG00000016459	LSM8	96	100.000	ENSVPAG00000001530	LSM8	99	100.000	Vicugna_pacos
ENSCAFG00000016459	LSM8	75	97.297	ENSVVUG00000013248	-	81	97.297	Vulpes_vulpes
ENSCAFG00000016459	LSM8	88	98.851	ENSXETG00000021829	lsm8	90	98.851	Xenopus_tropicalis
ENSCAFG00000016459	LSM8	95	90.426	ENSXCOG00000012938	lsm8	98	90.426	Xiphophorus_couchianus
ENSCAFG00000016459	LSM8	95	92.553	ENSXMAG00000025919	lsm8	98	92.553	Xiphophorus_maculatus