EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCAFG00000016532 (Gene tree)
Gene ID
479483
Gene Symbol
POLR2A
Alias
-
Full Name
RNA polymerase II subunit A
Gene Type
protein_coding
Species
Canis_familiaris
Status
putative
Strand
Plus strand
Length
25766 bases
Position
chr5:32404235-32430000
Accession
44792
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00000037353RNA_pol_Rpb1_5PF04998.175.1e-10111
ENSCAFP00000024364RNA_pol_Rpb1_5PF04998.176.5e-10111
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-23125
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-23225
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-23325
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-23425
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-23525
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-23625
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-23725
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-23825
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-23925
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-231025
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-231125
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-231225
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-231325
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-231425
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-231525
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-231625
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-231725
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-231825
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-231925
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-232025
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-232125
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-232225
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-232325
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-232425
ENSCAFP00000024364RNA_pol_Rpb1_RPF05001.131.9e-232525
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-07111
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-07211
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-07311
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-07411
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-07511
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-07611
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-07711
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-07811
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-07911
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-071011
ENSCAFP00000037353RNA_pol_Rpb1_RPF05001.133.1e-071111
ENSCAFP00000037353RNA_pol_Rpb1_4PF05000.173.2e-3811
ENSCAFP00000024364RNA_pol_Rpb1_4PF05000.173.7e-3811
ENSCAFP00000037353RNA_pol_Rpb1_2PF00623.209.2e-7511
ENSCAFP00000024364RNA_pol_Rpb1_2PF00623.201.2e-7411
ENSCAFP00000037353RNA_pol_Rpb1_3PF04983.184.3e-5011
ENSCAFP00000024364RNA_pol_Rpb1_3PF04983.185.2e-5011
ENSCAFP00000037353RNA_pol_Rpb1_1PF04997.124.2e-10911
ENSCAFP00000024364RNA_pol_Rpb1_1PF04997.125.1e-10911
ENSCAFP00000037353RNA_pol_Rpb1_7PF04990.121.9e-5411
ENSCAFP00000024364RNA_pol_Rpb1_7PF04990.122.1e-5411
ENSCAFP00000037353RNA_pol_Rpb1_6PF04992.141.2e-6711
ENSCAFP00000024364RNA_pol_Rpb1_6PF04992.141.5e-6711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00000026237-5910XM_852751ENSCAFP000000243641969 (aa)XP_857844F1PGS0
ENSCAFT00000050029-6592-ENSCAFP000000373531789 (aa)-J9NW09
Gene Model
Click here to download ENSCAFG00000016532's gene model file
Pathways
Pathway IDPathway NameSource
cfa03020RNA polymeraseKEGG
cfa05016Huntington diseaseKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000016532's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00000016532POLR2A6037.143ENSCAFG00000007613POLR1A6437.143
ENSCAFG00000016532POLR2A7338.377ENSCAFG00000015546POLR3A9138.377
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00000016532POLR2A9094.420ENSAPOG00000006552polr2a9194.413Acanthochromis_polyacanthus
ENSCAFG00000016532POLR2A10099.498ENSAMEG00000016265-10099.341Ailuropoda_melanoleuca
ENSCAFG00000016532POLR2A9991.816ENSACIG00000015982polr2a8192.427Amphilophus_citrinellus
ENSCAFG00000016532POLR2A9691.754ENSAOCG00000004255polr2a9194.475Amphiprion_ocellaris
ENSCAFG00000016532POLR2A9994.482ENSAPEG00000012623polr2a8694.475Amphiprion_percula
ENSCAFG00000016532POLR2A9994.358ENSATEG00000019644polr2a8694.351Anabas_testudineus
ENSCAFG00000016532POLR2A10098.099ENSACAG00000014561POLR2A10098.071Anolis_carolinensis
ENSCAFG00000016532POLR2A10099.721ENSANAG00000020093-10099.543Aotus_nancymaae
ENSCAFG00000016532POLR2A9994.172ENSACLG00000006735polr2a8694.165Astatotilapia_calliptera
ENSCAFG00000016532POLR2A9994.730ENSAMXG00000020046polr2a8694.724Astyanax_mexicanus
ENSCAFG00000016532POLR2A10099.721ENSBTAG00000046765POLR2A10099.492Bos_taurus
ENSCAFG00000016532POLR2A10098.771ENSCAFG00020007929-10098.681Canis_lupus_dingo
ENSCAFG00000016532POLR2A10099.721ENSCHIG00000027173-10099.492Capra_hircus
ENSCAFG00000016532POLR2A10097.056ENSTSYG00000012803-10097.563Carlito_syrichta
ENSCAFG00000016532POLR2A9899.804ENSCAPG00000001882-9898.607Cavia_aperea
ENSCAFG00000016532POLR2A9999.808ENSCPOG00000014812-9898.634Cavia_porcellus
ENSCAFG00000016532POLR2A10099.721ENSCCAG00000020938-10099.543Cebus_capucinus
ENSCAFG00000016532POLR2A10099.665ENSCATG00000013680-10099.492Cercocebus_atys
ENSCAFG00000016532POLR2A10099.553ENSCLAG00000012196-10099.391Chinchilla_lanigera
ENSCAFG00000016532POLR2A10091.970ENSCSAG00000011644-8590.685Chlorocebus_sabaeus
ENSCAFG00000016532POLR2A10095.025ENSCPBG00000012697POLR2A10093.553Chrysemys_picta_bellii
ENSCAFG00000016532POLR2A9876.488ENSCING00000007884-9976.751Ciona_intestinalis
ENSCAFG00000016532POLR2A9976.243ENSCSAVG00000008334-9980.180Ciona_savignyi
ENSCAFG00000016532POLR2A10098.938ENSCANG00000010622-10098.832Colobus_angolensis_palliatus
ENSCAFG00000016532POLR2A9993.362ENSCGRG00001003538Polr2a10092.857Cricetulus_griseus_chok1gshd
ENSCAFG00000016532POLR2A9096.074ENSCGRG00000012105Polr2a9696.012Cricetulus_griseus_crigri
ENSCAFG00000016532POLR2A9993.738ENSCSEG00000002635polr2a8693.731Cynoglossus_semilaevis
ENSCAFG00000016532POLR2A9994.606ENSCVAG00000005156polr2a8694.600Cyprinodon_variegatus
ENSCAFG00000016532POLR2A9994.424ENSDARG00000099966polr2a8594.417Danio_rerio
ENSCAFG00000016532POLR2A10096.548ENSDNOG00000016482-10096.548Dasypus_novemcinctus
ENSCAFG00000016532POLR2A10099.721ENSDORG00000008667Polr2a10099.543Dipodomys_ordii
ENSCAFG00000016532POLR2A9969.551FBgn0003277RpII2158474.766Drosophila_melanogaster
ENSCAFG00000016532POLR2A9390.022ENSETEG00000002540-9485.030Echinops_telfairi
ENSCAFG00000016532POLR2A9988.085ENSEBUG00000013967polr2a8287.492Eptatretus_burgeri
ENSCAFG00000016532POLR2A10097.820ENSEASG00005019114-10096.599Equus_asinus_asinus
ENSCAFG00000016532POLR2A10099.665ENSECAG00000018485POLR2A10099.492Equus_caballus
ENSCAFG00000016532POLR2A9499.733ENSEEUG00000001154-9599.733Erinaceus_europaeus
ENSCAFG00000016532POLR2A9990.080ENSELUG00000014284polr2a8490.746Esox_lucius
ENSCAFG00000016532POLR2A10099.665ENSFDAG00000008287-10099.492Fukomys_damarensis
ENSCAFG00000016532POLR2A9894.606ENSFHEG00000001768polr2a9594.600Fundulus_heteroclitus
ENSCAFG00000016532POLR2A9990.301ENSGMOG00000007725polr2a100100.000Gadus_morhua
ENSCAFG00000016532POLR2A9994.544ENSGAFG00000005389polr2a9994.538Gambusia_affinis
ENSCAFG00000016532POLR2A9990.689ENSGACG00000019366polr2a10088.190Gasterosteus_aculeatus
ENSCAFG00000016532POLR2A10097.720ENSGGOG00000014800-10097.720Gorilla_gorilla
ENSCAFG00000016532POLR2A9794.172ENSHBUG00000018937polr2a9694.165Haplochromis_burtoni
ENSCAFG00000016532POLR2A10099.665ENSHGLG00000012381POLR2A10099.492Heterocephalus_glaber_female
ENSCAFG00000016532POLR2A10099.665ENSHGLG00100014843POLR2A10099.492Heterocephalus_glaber_male
ENSCAFG00000016532POLR2A9993.986ENSHCOG00000011874polr2a8693.979Hippocampus_comes
ENSCAFG00000016532POLR2A9994.110ENSIPUG00000002613Polr2a8694.103Ictalurus_punctatus
ENSCAFG00000016532POLR2A10099.721ENSSTOG00000001304-10099.543Ictidomys_tridecemlineatus
ENSCAFG00000016532POLR2A10099.609ENSJJAG00000013049Polr2a10099.442Jaculus_jaculus
ENSCAFG00000016532POLR2A8985.355ENSKMAG00000016343polr2a8585.544Kryptolebias_marmoratus
ENSCAFG00000016532POLR2A9994.110ENSLBEG00000027652polr2a8694.103Labrus_bergylta
ENSCAFG00000016532POLR2A9887.160ENSLACG00000012071POLR2A8187.215Latimeria_chalumnae
ENSCAFG00000016532POLR2A9994.902ENSLOCG00000013863polr2a9894.596Lepisosteus_oculatus
ENSCAFG00000016532POLR2A10099.665ENSLAFG00000008626-10099.492Loxodonta_africana
ENSCAFG00000016532POLR2A5598.264ENSMFAG00000007042-9998.264Macaca_fascicularis
ENSCAFG00000016532POLR2A10099.665ENSMMUG00000023620-10099.492Macaca_mulatta
ENSCAFG00000016532POLR2A10098.886ENSMNEG00000040407-10098.786Macaca_nemestrina
ENSCAFG00000016532POLR2A9994.239ENSMLEG00000030263-9998.264Mandrillus_leucophaeus
ENSCAFG00000016532POLR2A9994.234ENSMAMG00000003351polr2a8694.227Mastacembelus_armatus
ENSCAFG00000016532POLR2A9994.172ENSMZEG00005021429polr2a8694.165Maylandia_zebra
ENSCAFG00000016532POLR2A5599.898ENSMAUG00000021055-9999.898Mesocricetus_auratus
ENSCAFG00000016532POLR2A10099.609ENSMICG00000013372-10099.442Microcebus_murinus
ENSCAFG00000016532POLR2A10092.943ENSMOCG00000018279Polr2a10091.498Microtus_ochrogaster
ENSCAFG00000016532POLR2A9093.738ENSMMOG00000012515polr2a9393.731Mola_mola
ENSCAFG00000016532POLR2A10099.273ENSMODG00000007009-10099.137Monodelphis_domestica
ENSCAFG00000016532POLR2A9794.369ENSMALG00000008716polr2a9992.303Monopterus_albus
ENSCAFG00000016532POLR2A10099.721MGP_CAROLIEiJ_G0016587Polr2a10099.492Mus_caroli
ENSCAFG00000016532POLR2A10099.721ENSMUSG00000005198Polr2a10099.492Mus_musculus
ENSCAFG00000016532POLR2A10097.724MGP_PahariEiJ_G0017718Polr2a10097.724Mus_pahari
ENSCAFG00000016532POLR2A10099.721MGP_SPRETEiJ_G0017423Polr2a10099.492Mus_spretus
ENSCAFG00000016532POLR2A10099.721ENSMPUG00000009648-10099.543Mustela_putorius_furo
ENSCAFG00000016532POLR2A10099.162ENSMLUG00000009088-10099.037Myotis_lucifugus
ENSCAFG00000016532POLR2A10099.721ENSNGAG00000002543Polr2a10099.543Nannospalax_galili
ENSCAFG00000016532POLR2A9991.569ENSNBRG00000002005polr2a8192.117Neolamprologus_brichardi
ENSCAFG00000016532POLR2A10098.383ENSNLEG00000009460-10098.328Nomascus_leucogenys
ENSCAFG00000016532POLR2A9699.455ENSMEUG00000008611-9699.455Notamacropus_eugenii
ENSCAFG00000016532POLR2A8899.810ENSOPRG00000015116-9999.810Ochotona_princeps
ENSCAFG00000016532POLR2A9899.733ENSODEG00000017674-10094.721Octodon_degus
ENSCAFG00000016532POLR2A9994.358ENSONIG00000009231polr2a8694.351Oreochromis_niloticus
ENSCAFG00000016532POLR2A5297.961ENSOANG00000003303-9898.067Ornithorhynchus_anatinus
ENSCAFG00000016532POLR2A10097.477ENSOCUG00000017929-10097.710Oryctolagus_cuniculus
ENSCAFG00000016532POLR2A9994.234ENSORLG00000006431polr2a8694.227Oryzias_latipes
ENSCAFG00000016532POLR2A9994.234ENSORLG00020010235polr2a8694.227Oryzias_latipes_hni
ENSCAFG00000016532POLR2A9994.234ENSORLG00015007075polr2a8694.227Oryzias_latipes_hsok
ENSCAFG00000016532POLR2A9994.344ENSOMEG00000010713polr2a10094.344Oryzias_melastigma
ENSCAFG00000016532POLR2A10099.553ENSOGAG00000033608-10099.391Otolemur_garnettii
ENSCAFG00000016532POLR2A10099.721ENSOARG00000013874-10099.312Ovis_aries
ENSCAFG00000016532POLR2A10097.935ENSPPAG00000043734-10096.954Pan_paniscus
ENSCAFG00000016532POLR2A10098.383ENSPTRG00000008691POLR2A10098.328Pan_troglodytes
ENSCAFG00000016532POLR2A10098.938ENSPANG00000024099-10098.832Papio_anubis
ENSCAFG00000016532POLR2A8592.793ENSPKIG00000005727polr2a8284.363Paramormyrops_kingsleyae
ENSCAFG00000016532POLR2A9996.478ENSPSIG00000014006POLR2A10096.478Pelodiscus_sinensis
ENSCAFG00000016532POLR2A10094.164ENSPMGG00000019734polr2a9994.600Periophthalmus_magnuspinnatus
ENSCAFG00000016532POLR2A10099.721ENSPEMG00000012521Polr2a10099.543Peromyscus_maniculatus_bairdii
ENSCAFG00000016532POLR2A9499.442ENSPCIG00000028851-9687.585Phascolarctos_cinereus
ENSCAFG00000016532POLR2A9794.544ENSPFOG00000007890polr2a9694.538Poecilia_formosa
ENSCAFG00000016532POLR2A9794.544ENSPLAG00000007399polr2a9694.538Poecilia_latipinna
ENSCAFG00000016532POLR2A9794.544ENSPMEG00000002071polr2a9992.365Poecilia_mexicana
ENSCAFG00000016532POLR2A9994.482ENSPREG00000013122polr2a8694.475Poecilia_reticulata
ENSCAFG00000016532POLR2A10098.376ENSPPYG00000007924-10098.479Pongo_abelii
ENSCAFG00000016532POLR2A9199.737ENSPCAG00000006951-8399.737Procavia_capensis
ENSCAFG00000016532POLR2A10098.392ENSPCOG00000025260-10098.338Propithecus_coquereli
ENSCAFG00000016532POLR2A10099.441ENSPVAG00000005069-10099.289Pteropus_vampyrus
ENSCAFG00000016532POLR2A9994.234ENSPNYG00000022340polr2a8694.227Pundamilia_nyererei
ENSCAFG00000016532POLR2A9994.544ENSPNAG00000011237polr2a8694.538Pygocentrus_nattereri
ENSCAFG00000016532POLR2A10099.776ENSRNOG00000028834Polr2a10099.543Rattus_norvegicus
ENSCAFG00000016532POLR2A9998.826ENSRBIG00000002471-10096.191Rhinopithecus_bieti
ENSCAFG00000016532POLR2A10099.217ENSRROG00000029583-10099.035Rhinopithecus_roxellana
ENSCAFG00000016532POLR2A9049.969YDL140CRPO219979.279Saccharomyces_cerevisiae
ENSCAFG00000016532POLR2A10099.721ENSSBOG00000000808-10099.543Saimiri_boliviensis_boliviensis
ENSCAFG00000016532POLR2A9998.322ENSSHAG00000002858-10096.851Sarcophilus_harrisii
ENSCAFG00000016532POLR2A9994.606ENSSFOG00015023275polr2a8594.600Scleropages_formosus
ENSCAFG00000016532POLR2A9993.986ENSSMAG00000009137polr2a8593.979Scophthalmus_maximus
ENSCAFG00000016532POLR2A9994.358ENSSDUG00000020466polr2a8694.351Seriola_dumerili
ENSCAFG00000016532POLR2A9994.358ENSSLDG00000020613polr2a8694.351Seriola_lalandi_dorsalis
ENSCAFG00000016532POLR2A9994.976ENSSARG00000005875-9994.976Sorex_araneus
ENSCAFG00000016532POLR2A10094.420ENSSPAG00000016741polr2a9594.413Stegastes_partitus
ENSCAFG00000016532POLR2A10098.882ENSSSCG00000028278-10098.782Sus_scrofa
ENSCAFG00000016532POLR2A9988.538ENSTRUG00000012320polr2a8188.524Takifugu_rubripes
ENSCAFG00000016532POLR2A9992.870ENSTNIG00000010136polr2a10092.862Tetraodon_nigroviridis
ENSCAFG00000016532POLR2A74100.000ENSTBEG00000013294-58100.000Tupaia_belangeri
ENSCAFG00000016532POLR2A10097.988ENSTTRG00000014273-10097.970Tursiops_truncatus
ENSCAFG00000016532POLR2A9996.884ENSUAMG00000014866-10099.628Ursus_americanus
ENSCAFG00000016532POLR2A9996.960ENSUMAG00000015732-10096.960Ursus_maritimus
ENSCAFG00000016532POLR2A66100.000ENSVPAG00000008842-76100.000Vicugna_pacos
ENSCAFG00000016532POLR2A9999.273ENSVVUG00000027878-10098.273Vulpes_vulpes
ENSCAFG00000016532POLR2A9996.663ENSXETG00000012465polr2a10096.663Xenopus_tropicalis
ENSCAFG00000016532POLR2A9692.312ENSXCOG00000001804polr2a9992.303Xiphophorus_couchianus
ENSCAFG00000016532POLR2A9994.482ENSXMAG00000015687polr2a8694.475Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us