EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000016788 (Gene tree)
Gene ID: 480121
Gene Symbol: GPATCH4
Alias: -
Full Name: G-patch domain containing 4
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 7417 bases
Position: chr7:41362670-41370086
Accession: 41368
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000024681	G-patch	PF01585.23	6.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000026575	-	1260	XM_005622699	ENSCAFP00000024681	420 (aa)	XP_005622756	F6V9J5
ENSCAFT00000044679	-	5284	-	ENSCAFP00000039885	390 (aa)	-	J9P2V7

Gene Model

Click here to download ENSCAFG00000016788's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000016788's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000016788	GPATCH4	75	70.245	ENSG00000160818	GPATCH4	95	87.611	Homo_sapiens
ENSCAFG00000016788	GPATCH4	90	67.419	ENSAMEG00000014829	GPATCH4	98	70.507	Ailuropoda_melanoleuca
ENSCAFG00000016788	GPATCH4	100	57.768	ENSANAG00000035354	GPATCH4	92	67.052	Aotus_nancymaae
ENSCAFG00000016788	GPATCH4	52	41.152	ENSACLG00000010456	gpatch4	51	55.952	Astatotilapia_calliptera
ENSCAFG00000016788	GPATCH4	87	62.564	ENSBTAG00000000406	GPATCH4	95	62.564	Bos_taurus
ENSCAFG00000016788	GPATCH4	90	59.211	ENSCJAG00000006048	GPATCH4	92	86.607	Callithrix_jacchus
ENSCAFG00000016788	GPATCH4	79	64.773	ENSCHIG00000021295	GPATCH4	94	62.113	Capra_hircus
ENSCAFG00000016788	GPATCH4	57	82.231	ENSCCAG00000036114	GPATCH4	92	86.607	Cebus_capucinus
ENSCAFG00000016788	GPATCH4	96	61.882	ENSCATG00000042152	GPATCH4	82	83.761	Cercocebus_atys
ENSCAFG00000016788	GPATCH4	99	52.018	ENSCLAG00000002967	-	98	53.303	Chinchilla_lanigera
ENSCAFG00000016788	GPATCH4	96	61.466	ENSCSAG00000002161	GPATCH4	95	61.502	Chlorocebus_sabaeus
ENSCAFG00000016788	GPATCH4	75	68.519	ENSCANG00000030031	GPATCH4	82	83.761	Colobus_angolensis_palliatus
ENSCAFG00000016788	GPATCH4	68	67.483	ENSCGRG00001016898	Gpatch4	70	67.785	Cricetulus_griseus_chok1gshd
ENSCAFG00000016788	GPATCH4	68	67.483	ENSCGRG00000008399	Gpatch4	70	67.785	Cricetulus_griseus_crigri
ENSCAFG00000016788	GPATCH4	100	59.417	ENSDNOG00000034673	GPATCH4	97	60.599	Dasypus_novemcinctus
ENSCAFG00000016788	GPATCH4	96	56.177	ENSETEG00000000659	-	96	56.512	Echinops_telfairi
ENSCAFG00000016788	GPATCH4	98	64.593	ENSEASG00005018284	GPATCH4	97	64.833	Equus_asinus_asinus
ENSCAFG00000016788	GPATCH4	98	63.309	ENSECAG00000011135	GPATCH4	97	64.678	Equus_caballus
ENSCAFG00000016788	GPATCH4	95	55.932	ENSEEUG00000003221	-	93	56.595	Erinaceus_europaeus
ENSCAFG00000016788	GPATCH4	69	77.778	ENSFCAG00000006554	GPATCH4	84	75.987	Felis_catus
ENSCAFG00000016788	GPATCH4	51	43.333	ENSFHEG00000003097	gpatch4	55	46.667	Fundulus_heteroclitus
ENSCAFG00000016788	GPATCH4	74	71.118	ENSGGOG00000000753	GPATCH4	82	84.615	Gorilla_gorilla
ENSCAFG00000016788	GPATCH4	52	41.975	ENSHBUG00000009675	gpatch4	50	55.952	Haplochromis_burtoni
ENSCAFG00000016788	GPATCH4	55	76.957	ENSSTOG00000020510	GPATCH4	95	78.906	Ictidomys_tridecemlineatus
ENSCAFG00000016788	GPATCH4	85	31.920	ENSLBEG00000016296	gpatch4	80	36.020	Labrus_bergylta
ENSCAFG00000016788	GPATCH4	96	52.009	ENSLAFG00000028327	-	99	51.620	Loxodonta_africana
ENSCAFG00000016788	GPATCH4	73	70.978	ENSMFAG00000030965	GPATCH4	82	83.761	Macaca_fascicularis
ENSCAFG00000016788	GPATCH4	96	60.514	ENSMMUG00000002624	GPATCH4	82	84.615	Macaca_mulatta
ENSCAFG00000016788	GPATCH4	90	58.458	ENSMNEG00000028844	GPATCH4	82	83.761	Macaca_nemestrina
ENSCAFG00000016788	GPATCH4	74	69.470	ENSMLEG00000037909	GPATCH4	82	82.906	Mandrillus_leucophaeus
ENSCAFG00000016788	GPATCH4	52	42.387	ENSMZEG00005017452	gpatch4	56	46.047	Maylandia_zebra
ENSCAFG00000016788	GPATCH4	67	74.286	ENSMICG00000013624	GPATCH4	96	64.067	Microcebus_murinus
ENSCAFG00000016788	GPATCH4	60	56.809	ENSMODG00000016818	-	90	56.809	Monodelphis_domestica
ENSCAFG00000016788	GPATCH4	51	45.259	ENSMALG00000003793	gpatch4	50	47.596	Monopterus_albus
ENSCAFG00000016788	GPATCH4	68	68.166	ENSMUSG00000028069	Gpatch4	82	82.051	Mus_musculus
ENSCAFG00000016788	GPATCH4	68	67.247	MGP_SPRETEiJ_G0026093	Gpatch4	82	82.564	Mus_spretus
ENSCAFG00000016788	GPATCH4	97	67.907	ENSMPUG00000004136	-	99	68.140	Mustela_putorius_furo
ENSCAFG00000016788	GPATCH4	98	58.314	ENSMLUG00000009571	GPATCH4	97	60.321	Myotis_lucifugus
ENSCAFG00000016788	GPATCH4	74	69.782	ENSNLEG00000027678	GPATCH4	85	70.588	Nomascus_leucogenys
ENSCAFG00000016788	GPATCH4	60	52.381	ENSMEUG00000006861	-	92	51.587	Notamacropus_eugenii
ENSCAFG00000016788	GPATCH4	58	41.176	ENSORLG00020013892	gpatch4	68	41.065	Oryzias_latipes_hni
ENSCAFG00000016788	GPATCH4	58	40.909	ENSORLG00015019725	gpatch4	97	33.429	Oryzias_latipes_hsok
ENSCAFG00000016788	GPATCH4	97	57.143	ENSOGAG00000006698	-	98	58.295	Otolemur_garnettii
ENSCAFG00000016788	GPATCH4	79	65.341	ENSOARG00000006123	GPATCH4	94	62.308	Ovis_aries
ENSCAFG00000016788	GPATCH4	93	60.988	ENSPPAG00000028364	-	82	84.615	Pan_paniscus
ENSCAFG00000016788	GPATCH4	69	76.736	ENSPPRG00000002106	GPATCH4	84	75.000	Panthera_pardus
ENSCAFG00000016788	GPATCH4	70	77.133	ENSPTIG00000006717	GPATCH4	98	71.557	Panthera_tigris_altaica
ENSCAFG00000016788	GPATCH4	93	60.988	ENSPTRG00000001464	GPATCH4	82	84.615	Pan_troglodytes
ENSCAFG00000016788	GPATCH4	74	70.093	ENSPANG00000018543	GPATCH4	82	84.615	Papio_anubis
ENSCAFG00000016788	GPATCH4	97	61.839	ENSPPYG00000000711	-	98	61.851	Pongo_abelii
ENSCAFG00000016788	GPATCH4	51	63.426	ENSPCOG00000013948	-	89	76.378	Propithecus_coquereli
ENSCAFG00000016788	GPATCH4	63	72.075	ENSPVAG00000007505	-	87	59.452	Pteropus_vampyrus
ENSCAFG00000016788	GPATCH4	52	41.152	ENSPNYG00000018461	gpatch4	52	46.766	Pundamilia_nyererei
ENSCAFG00000016788	GPATCH4	68	68.881	ENSRNOG00000018969	Gpatch4	71	68.581	Rattus_norvegicus
ENSCAFG00000016788	GPATCH4	70	74.490	ENSRBIG00000005742	GPATCH4	94	75.338	Rhinopithecus_bieti
ENSCAFG00000016788	GPATCH4	96	61.412	ENSRROG00000044157	GPATCH4	82	83.761	Rhinopithecus_roxellana
ENSCAFG00000016788	GPATCH4	100	58.613	ENSSBOG00000024840	GPATCH4	98	59.864	Saimiri_boliviensis_boliviensis
ENSCAFG00000016788	GPATCH4	54	58.333	ENSSHAG00000015436	-	92	56.031	Sarcophilus_harrisii
ENSCAFG00000016788	GPATCH4	62	38.144	ENSSMAG00000016329	gpatch4	93	34.375	Scophthalmus_maximus
ENSCAFG00000016788	GPATCH4	63	56.554	ENSSARG00000008606	-	65	56.554	Sorex_araneus
ENSCAFG00000016788	GPATCH4	97	61.321	ENSSSCG00000006481	GPATCH4	97	64.319	Sus_scrofa
ENSCAFG00000016788	GPATCH4	98	62.053	ENSTTRG00000001113	GPATCH4	97	62.708	Tursiops_truncatus
ENSCAFG00000016788	GPATCH4	97	68.692	ENSUAMG00000013407	GPATCH4	98	71.759	Ursus_americanus
ENSCAFG00000016788	GPATCH4	97	66.822	ENSUMAG00000017797	GPATCH4	98	71.296	Ursus_maritimus
ENSCAFG00000016788	GPATCH4	94	98.477	ENSVVUG00000006004	-	94	98.477	Vulpes_vulpes
ENSCAFG00000016788	GPATCH4	56	41.434	ENSXCOG00000003911	gpatch4	81	37.864	Xiphophorus_couchianus