EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000016859 (Gene tree)
Gene ID: 479489
Gene Symbol: CHD3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 19337 bases
Position: chr5:32747619-32766955
Accession: 39201
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000024834	ResIII	PF04851.15	1.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000026729	-	5997	XM_536627	ENSCAFP00000024834	1998 (aa)	-	E2RTI2

Gene Model

Click here to download ENSCAFG00000016859's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000016859's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000016859	CHD3	91	69.830	ENSCAFG00000019545	CHD5	99	69.931
ENSCAFG00000016859	CHD3	71	74.879	ENSCAFG00000014929	CHD4	95	70.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000016859	CHD3	100	98.001	ENSG00000170004	CHD3	100	98.001	Homo_sapiens
ENSCAFG00000016859	CHD3	79	81.053	ENSAPOG00000005614	chd3	94	81.053	Acanthochromis_polyacanthus
ENSCAFG00000016859	CHD3	68	97.581	ENSAMEG00000003025	-	100	97.581	Ailuropoda_melanoleuca
ENSCAFG00000016859	CHD3	79	87.861	ENSACIG00000019671	chd3	99	87.861	Amphilophus_citrinellus
ENSCAFG00000016859	CHD3	81	81.053	ENSAOCG00000023784	chd3	97	81.603	Amphiprion_ocellaris
ENSCAFG00000016859	CHD3	75	77.495	ENSAPEG00000006341	chd3	96	73.619	Amphiprion_percula
ENSCAFG00000016859	CHD3	96	72.859	ENSATEG00000000848	chd3	99	74.163	Anabas_testudineus
ENSCAFG00000016859	CHD3	97	85.320	ENSACAG00000004276	CHD3	95	84.818	Anolis_carolinensis
ENSCAFG00000016859	CHD3	100	95.002	ENSANAG00000034323	CHD3	99	98.348	Aotus_nancymaae
ENSCAFG00000016859	CHD3	90	80.449	ENSACLG00000009222	chd3	99	73.481	Astatotilapia_calliptera
ENSCAFG00000016859	CHD3	98	98.121	ENSBTAG00000014377	CHD3	97	98.125	Bos_taurus
ENSCAFG00000016859	CHD3	99	97.799	ENSCJAG00000014766	CHD3	99	97.799	Callithrix_jacchus
ENSCAFG00000016859	CHD3	94	99.840	ENSCAFG00020007422	CHD3	100	100.000	Canis_lupus_dingo
ENSCAFG00000016859	CHD3	99	98.383	ENSCHIG00000016737	CHD3	100	98.383	Capra_hircus
ENSCAFG00000016859	CHD3	100	97.601	ENSTSYG00000035658	CHD3	100	97.601	Carlito_syrichta
ENSCAFG00000016859	CHD3	99	94.330	ENSCAPG00000014864	CHD3	99	94.330	Cavia_aperea
ENSCAFG00000016859	CHD3	99	96.839	ENSCPOG00000022653	CHD3	99	96.839	Cavia_porcellus
ENSCAFG00000016859	CHD3	100	97.751	ENSCCAG00000034792	CHD3	100	97.751	Cebus_capucinus
ENSCAFG00000016859	CHD3	100	97.801	ENSCATG00000041717	CHD3	100	97.801	Cercocebus_atys
ENSCAFG00000016859	CHD3	98	98.119	ENSCLAG00000010523	CHD3	100	98.119	Chinchilla_lanigera
ENSCAFG00000016859	CHD3	98	98.272	ENSCSAG00000011122	CHD3	99	98.272	Chlorocebus_sabaeus
ENSCAFG00000016859	CHD3	89	83.035	ENSCPBG00000011966	CHD3	99	86.420	Chrysemys_picta_bellii
ENSCAFG00000016859	CHD3	100	97.751	ENSCANG00000037641	CHD3	100	97.751	Colobus_angolensis_palliatus
ENSCAFG00000016859	CHD3	98	97.102	ENSCGRG00001011306	Chd3	100	97.102	Cricetulus_griseus_chok1gshd
ENSCAFG00000016859	CHD3	93	98.529	ENSCGRG00000007878	Chd3	99	98.529	Cricetulus_griseus_crigri
ENSCAFG00000016859	CHD3	89	79.605	ENSCSEG00000004489	chd3	99	76.090	Cynoglossus_semilaevis
ENSCAFG00000016859	CHD3	86	82.470	ENSCVAG00000007293	chd3	95	82.470	Cyprinodon_variegatus
ENSCAFG00000016859	CHD3	87	82.274	ENSDARG00000021405	chd3	99	75.996	Danio_rerio
ENSCAFG00000016859	CHD3	99	82.947	ENSDNOG00000047846	CHD3	99	83.098	Dasypus_novemcinctus
ENSCAFG00000016859	CHD3	98	97.711	ENSDORG00000010713	Chd3	100	97.711	Dipodomys_ordii
ENSCAFG00000016859	CHD3	96	91.386	ENSETEG00000017733	CHD3	100	91.541	Echinops_telfairi
ENSCAFG00000016859	CHD3	75	69.840	ENSEBUG00000008310	chd3	99	70.396	Eptatretus_burgeri
ENSCAFG00000016859	CHD3	92	98.472	ENSEASG00005019360	CHD3	100	98.472	Equus_asinus_asinus
ENSCAFG00000016859	CHD3	92	98.527	ENSECAG00000010051	CHD3	100	98.527	Equus_caballus
ENSCAFG00000016859	CHD3	91	98.305	ENSEEUG00000015205	CHD3	92	100.000	Erinaceus_europaeus
ENSCAFG00000016859	CHD3	77	90.476	ENSELUG00000019499	chd3	99	90.476	Esox_lucius
ENSCAFG00000016859	CHD3	98	98.729	ENSFCAG00000009629	CHD3	96	98.729	Felis_catus
ENSCAFG00000016859	CHD3	99	94.957	ENSFDAG00000008220	CHD3	99	95.108	Fukomys_damarensis
ENSCAFG00000016859	CHD3	87	80.406	ENSGMOG00000013599	chd3	90	81.015	Gadus_morhua
ENSCAFG00000016859	CHD3	58	75.149	ENSGAFG00000004055	chd3	99	76.561	Gambusia_affinis
ENSCAFG00000016859	CHD3	97	70.696	ENSGACG00000019275	chd3	100	70.538	Gasterosteus_aculeatus
ENSCAFG00000016859	CHD3	75	85.294	ENSGAGG00000013164	CHD3	98	86.202	Gopherus_agassizii
ENSCAFG00000016859	CHD3	100	98.001	ENSGGOG00000013496	CHD3	100	98.001	Gorilla_gorilla
ENSCAFG00000016859	CHD3	99	97.044	ENSHGLG00000012017	CHD3	99	97.044	Heterocephalus_glaber_female
ENSCAFG00000016859	CHD3	88	91.014	ENSHGLG00100013902	CHD3	99	91.014	Heterocephalus_glaber_male
ENSCAFG00000016859	CHD3	93	72.474	ENSHCOG00000010170	chd3	96	72.950	Hippocampus_comes
ENSCAFG00000016859	CHD3	83	80.652	ENSIPUG00000003271	chd3	96	79.709	Ictalurus_punctatus
ENSCAFG00000016859	CHD3	99	97.545	ENSSTOG00000025907	CHD3	99	98.171	Ictidomys_tridecemlineatus
ENSCAFG00000016859	CHD3	99	96.493	ENSJJAG00000017633	Chd3	100	97.306	Jaculus_jaculus
ENSCAFG00000016859	CHD3	85	90.047	ENSKMAG00000019292	chd3	97	74.682	Kryptolebias_marmoratus
ENSCAFG00000016859	CHD3	95	69.211	ENSLBEG00000028485	chd3	94	70.505	Labrus_bergylta
ENSCAFG00000016859	CHD3	95	74.458	ENSLACG00000008031	CHD3	99	73.379	Latimeria_chalumnae
ENSCAFG00000016859	CHD3	97	76.834	ENSLOCG00000013965	chd3	97	77.177	Lepisosteus_oculatus
ENSCAFG00000016859	CHD3	94	94.542	ENSLAFG00000000572	CHD3	100	94.542	Loxodonta_africana
ENSCAFG00000016859	CHD3	100	97.751	ENSMFAG00000020113	CHD3	100	97.751	Macaca_fascicularis
ENSCAFG00000016859	CHD3	100	95.402	ENSMMUG00000022221	CHD3	100	95.402	Macaca_mulatta
ENSCAFG00000016859	CHD3	100	97.751	ENSMNEG00000001728	CHD3	100	97.751	Macaca_nemestrina
ENSCAFG00000016859	CHD3	100	97.801	ENSMLEG00000032249	CHD3	100	97.801	Mandrillus_leucophaeus
ENSCAFG00000016859	CHD3	85	75.480	ENSMAMG00000000564	chd3	99	75.902	Mastacembelus_armatus
ENSCAFG00000016859	CHD3	99	96.268	ENSMAUG00000013873	Chd3	99	94.365	Mesocricetus_auratus
ENSCAFG00000016859	CHD3	98	98.120	ENSMICG00000008741	CHD3	100	94.514	Microcebus_murinus
ENSCAFG00000016859	CHD3	98	97.096	ENSMOCG00000004848	Chd3	100	97.096	Microtus_ochrogaster
ENSCAFG00000016859	CHD3	94	74.194	ENSMMOG00000012699	chd3	99	73.684	Mola_mola
ENSCAFG00000016859	CHD3	92	92.203	ENSMODG00000007509	CHD3	100	92.312	Monodelphis_domestica
ENSCAFG00000016859	CHD3	98	96.902	MGP_CAROLIEiJ_G0016564	Chd3	100	95.412	Mus_caroli
ENSCAFG00000016859	CHD3	98	97.005	ENSMUSG00000018474	Chd3	99	95.518	Mus_musculus
ENSCAFG00000016859	CHD3	98	97.105	MGP_PahariEiJ_G0017695	Chd3	100	95.620	Mus_pahari
ENSCAFG00000016859	CHD3	98	97.005	MGP_SPRETEiJ_G0017400	Chd3	100	95.518	Mus_spretus
ENSCAFG00000016859	CHD3	86	98.658	ENSMPUG00000008861	CHD3	100	98.658	Mustela_putorius_furo
ENSCAFG00000016859	CHD3	100	96.505	ENSMLUG00000014643	-	100	96.505	Myotis_lucifugus
ENSCAFG00000016859	CHD3	98	97.358	ENSNGAG00000000773	Chd3	98	97.358	Nannospalax_galili
ENSCAFG00000016859	CHD3	85	75.337	ENSNBRG00000000636	chd3	97	75.676	Neolamprologus_brichardi
ENSCAFG00000016859	CHD3	99	94.458	ENSNLEG00000009770	CHD3	100	95.330	Nomascus_leucogenys
ENSCAFG00000016859	CHD3	84	91.209	ENSMEUG00000005852	CHD3	87	91.209	Notamacropus_eugenii
ENSCAFG00000016859	CHD3	94	96.261	ENSOPRG00000011069	CHD3	100	96.261	Ochotona_princeps
ENSCAFG00000016859	CHD3	99	97.273	ENSODEG00000017785	CHD3	99	97.273	Octodon_degus
ENSCAFG00000016859	CHD3	95	74.676	ENSONIG00000009292	chd3	100	75.295	Oreochromis_niloticus
ENSCAFG00000016859	CHD3	98	93.333	ENSOCUG00000029299	CHD3	100	92.574	Oryctolagus_cuniculus
ENSCAFG00000016859	CHD3	82	70.869	ENSORLG00000007107	chd3	93	71.049	Oryzias_latipes
ENSCAFG00000016859	CHD3	56	73.233	ENSORLG00020008387	chd3	95	73.498	Oryzias_latipes_hni
ENSCAFG00000016859	CHD3	70	80.500	ENSOMEG00000013691	chd3	99	77.193	Oryzias_melastigma
ENSCAFG00000016859	CHD3	98	98.018	ENSOGAG00000003216	CHD3	99	98.018	Otolemur_garnettii
ENSCAFG00000016859	CHD3	99	95.554	ENSOARG00000017855	CHD3	99	95.554	Ovis_aries
ENSCAFG00000016859	CHD3	100	95.665	ENSPPAG00000032886	CHD3	100	95.665	Pan_paniscus
ENSCAFG00000016859	CHD3	99	98.448	ENSPPRG00000000626	CHD3	99	98.448	Panthera_pardus
ENSCAFG00000016859	CHD3	100	98.051	ENSPTRG00000008714	CHD3	100	98.051	Pan_troglodytes
ENSCAFG00000016859	CHD3	100	97.801	ENSPANG00000023938	CHD3	100	97.801	Papio_anubis
ENSCAFG00000016859	CHD3	97	75.374	ENSPKIG00000006305	chd3	99	79.180	Paramormyrops_kingsleyae
ENSCAFG00000016859	CHD3	54	89.872	ENSPSIG00000010177	CHD3	98	90.420	Pelodiscus_sinensis
ENSCAFG00000016859	CHD3	99	96.517	ENSPEMG00000014262	Chd3	99	96.517	Peromyscus_maniculatus_bairdii
ENSCAFG00000016859	CHD3	98	92.585	ENSPCIG00000005442	CHD3	97	95.241	Phascolarctos_cinereus
ENSCAFG00000016859	CHD3	95	72.852	ENSPFOG00000012464	chd3	92	73.996	Poecilia_formosa
ENSCAFG00000016859	CHD3	86	83.401	ENSPLAG00000002887	chd3	98	71.205	Poecilia_latipinna
ENSCAFG00000016859	CHD3	53	81.702	ENSPMEG00000016725	chd3	94	73.224	Poecilia_mexicana
ENSCAFG00000016859	CHD3	89	84.133	ENSPREG00000011044	chd3	99	78.309	Poecilia_reticulata
ENSCAFG00000016859	CHD3	100	93.203	ENSPPYG00000007940	CHD3	100	93.203	Pongo_abelii
ENSCAFG00000016859	CHD3	95	97.722	ENSPCAG00000004350	CHD3	96	97.722	Procavia_capensis
ENSCAFG00000016859	CHD3	100	97.101	ENSPCOG00000020952	CHD3	100	97.101	Propithecus_coquereli
ENSCAFG00000016859	CHD3	85	97.565	ENSPVAG00000016344	CHD3	87	97.565	Pteropus_vampyrus
ENSCAFG00000016859	CHD3	88	80.280	ENSPNAG00000020393	chd3	98	80.629	Pygocentrus_nattereri
ENSCAFG00000016859	CHD3	92	96.676	ENSRNOG00000009722	Chd3	100	96.676	Rattus_norvegicus
ENSCAFG00000016859	CHD3	100	94.719	ENSRBIG00000033562	CHD3	100	94.719	Rhinopithecus_bieti
ENSCAFG00000016859	CHD3	100	96.202	ENSRROG00000029554	CHD3	100	96.285	Rhinopithecus_roxellana
ENSCAFG00000016859	CHD3	100	97.801	ENSSBOG00000020719	CHD3	100	97.801	Saimiri_boliviensis_boliviensis
ENSCAFG00000016859	CHD3	98	92.602	ENSSHAG00000014412	CHD3	100	92.704	Sarcophilus_harrisii
ENSCAFG00000016859	CHD3	86	80.029	ENSSFOG00015023123	chd3	98	74.935	Scleropages_formosus
ENSCAFG00000016859	CHD3	77	91.358	ENSSMAG00000006451	chd3	99	75.854	Scophthalmus_maximus
ENSCAFG00000016859	CHD3	54	73.327	ENSSDUG00000005792	chd3	95	73.694	Seriola_dumerili
ENSCAFG00000016859	CHD3	79	81.383	ENSSPAG00000013694	chd3	98	81.383	Stegastes_partitus
ENSCAFG00000016859	CHD3	99	98.022	ENSSSCG00000021363	CHD3	100	97.983	Sus_scrofa
ENSCAFG00000016859	CHD3	74	76.693	ENSTRUG00000014990	chd3	89	76.370	Takifugu_rubripes
ENSCAFG00000016859	CHD3	96	73.453	ENSTNIG00000012998	chd3	99	72.400	Tetraodon_nigroviridis
ENSCAFG00000016859	CHD3	63	100.000	ENSTBEG00000011454	-	71	100.000	Tupaia_belangeri
ENSCAFG00000016859	CHD3	97	98.669	ENSTTRG00000010295	CHD3	97	98.669	Tursiops_truncatus
ENSCAFG00000016859	CHD3	92	97.823	ENSUAMG00000005475	CHD3	99	97.823	Ursus_americanus
ENSCAFG00000016859	CHD3	55	100.000	ENSVPAG00000010794	-	62	100.000	Vicugna_pacos
ENSCAFG00000016859	CHD3	94	99.841	ENSVVUG00000028011	CHD3	99	99.840	Vulpes_vulpes
ENSCAFG00000016859	CHD3	97	72.459	ENSXETG00000012991	chd3	92	73.726	Xenopus_tropicalis
ENSCAFG00000016859	CHD3	51	83.296	ENSXCOG00000000809	chd3	96	83.296	Xiphophorus_couchianus
ENSCAFG00000016859	CHD3	79	86.127	ENSXMAG00000016035	chd3	99	88.095	Xiphophorus_maculatus