EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000017070 (Gene tree)
Gene ID: 476692
Gene Symbol: TRMT1
Alias: -
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 7890 bases
Position: chr20:49100804-49108693
Accession: 47850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000042497	zf-CCCH	PF00642.24	2.5e-06	1	1
ENSCAFP00000025133	zf-CCCH	PF00642.24	2.7e-06	1	1
ENSCAFP00000042497	TRM	PF02005.16	2e-149	1	1
ENSCAFP00000025133	TRM	PF02005.16	2.6e-149	1	1
ENSCAFP00000042497	Met_10	PF02475.16	1.2e-05	1	1
ENSCAFP00000025133	Met_10	PF02475.16	1.4e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000046457	-	2031	XM_533897	ENSCAFP00000042497	637 (aa)	XP_533897	J9P9R4
ENSCAFT00000027033	-	2085	XM_014122199	ENSCAFP00000025133	694 (aa)	XP_013977674	E2QUE2

Gene Model

Click here to download ENSCAFG00000017070's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017070's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017070	TRMT1	98	90.545	ENSG00000104907	TRMT1	100	94.764	Homo_sapiens
ENSCAFG00000017070	TRMT1	100	94.976	ENSAMEG00000012598	TRMT1	99	94.144	Ailuropoda_melanoleuca
ENSCAFG00000017070	TRMT1	90	59.408	ENSACIG00000018680	trmt1	88	59.408	Amphilophus_citrinellus
ENSCAFG00000017070	TRMT1	91	65.749	ENSAOCG00000006781	trmt1	86	65.749	Amphiprion_ocellaris
ENSCAFG00000017070	TRMT1	91	65.749	ENSAPEG00000007712	trmt1	86	65.749	Amphiprion_percula
ENSCAFG00000017070	TRMT1	91	67.918	ENSATEG00000001872	trmt1	86	67.918	Anabas_testudineus
ENSCAFG00000017070	TRMT1	92	66.948	ENSACAG00000003825	TRMT1	99	65.097	Anolis_carolinensis
ENSCAFG00000017070	TRMT1	99	85.466	ENSANAG00000023016	TRMT1	99	87.076	Aotus_nancymaae
ENSCAFG00000017070	TRMT1	90	65.157	ENSACLG00000010073	trmt1	92	65.157	Astatotilapia_calliptera
ENSCAFG00000017070	TRMT1	90	68.056	ENSAMXG00000012026	trmt1	85	68.056	Astyanax_mexicanus
ENSCAFG00000017070	TRMT1	100	89.639	ENSBTAG00000019325	TRMT1	98	86.351	Bos_taurus
ENSCAFG00000017070	TRMT1	80	41.300	WBGene00006613	trm-1	93	41.300	Caenorhabditis_elegans
ENSCAFG00000017070	TRMT1	99	84.992	ENSCJAG00000004566	TRMT1	99	84.615	Callithrix_jacchus
ENSCAFG00000017070	TRMT1	99	98.092	ENSCAFG00020005397	TRMT1	100	95.619	Canis_lupus_dingo
ENSCAFG00000017070	TRMT1	100	89.342	ENSCHIG00000013569	TRMT1	100	88.386	Capra_hircus
ENSCAFG00000017070	TRMT1	98	84.505	ENSTSYG00000003207	TRMT1	99	84.146	Carlito_syrichta
ENSCAFG00000017070	TRMT1	88	79.893	ENSCAPG00000003355	TRMT1	98	79.893	Cavia_aperea
ENSCAFG00000017070	TRMT1	98	83.467	ENSCPOG00000011754	TRMT1	99	81.957	Cavia_porcellus
ENSCAFG00000017070	TRMT1	97	86.224	ENSCCAG00000022263	TRMT1	99	86.224	Cebus_capucinus
ENSCAFG00000017070	TRMT1	87	74.630	ENSCATG00000038220	-	98	74.630	Cercocebus_atys
ENSCAFG00000017070	TRMT1	100	90.110	ENSCATG00000039850	TRMT1	100	88.973	Cercocebus_atys
ENSCAFG00000017070	TRMT1	98	87.660	ENSCLAG00000015295	TRMT1	96	86.371	Chinchilla_lanigera
ENSCAFG00000017070	TRMT1	79	91.881	ENSCSAG00000006500	TRMT1	100	90.566	Chlorocebus_sabaeus
ENSCAFG00000017070	TRMT1	93	69.983	ENSCPBG00000023866	TRMT1	97	65.379	Chrysemys_picta_bellii
ENSCAFG00000017070	TRMT1	87	45.390	ENSCING00000002884	-	99	45.390	Ciona_intestinalis
ENSCAFG00000017070	TRMT1	86	46.209	ENSCSAVG00000010927	-	100	46.211	Ciona_savignyi
ENSCAFG00000017070	TRMT1	95	70.033	ENSCANG00000031650	-	98	68.643	Colobus_angolensis_palliatus
ENSCAFG00000017070	TRMT1	100	73.239	ENSCANG00000040631	TRMT1	99	72.936	Colobus_angolensis_palliatus
ENSCAFG00000017070	TRMT1	99	84.434	ENSCGRG00001022594	Trmt1	100	82.622	Cricetulus_griseus_chok1gshd
ENSCAFG00000017070	TRMT1	99	84.434	ENSCGRG00000017732	Trmt1	100	82.583	Cricetulus_griseus_crigri
ENSCAFG00000017070	TRMT1	91	66.209	ENSCSEG00000001643	trmt1	84	68.872	Cynoglossus_semilaevis
ENSCAFG00000017070	TRMT1	94	65.947	ENSCVAG00000011886	trmt1	89	65.947	Cyprinodon_variegatus
ENSCAFG00000017070	TRMT1	90	65.921	ENSDARG00000010978	trmt1	85	65.921	Danio_rerio
ENSCAFG00000017070	TRMT1	87	62.679	ENSDNOG00000048240	-	95	62.679	Dasypus_novemcinctus
ENSCAFG00000017070	TRMT1	99	83.360	ENSDORG00000014298	Trmt1	99	81.957	Dipodomys_ordii
ENSCAFG00000017070	TRMT1	82	48.868	FBgn0032430	CG6388	89	48.868	Drosophila_melanogaster
ENSCAFG00000017070	TRMT1	54	84.328	ENSETEG00000015483	-	54	82.807	Echinops_telfairi
ENSCAFG00000017070	TRMT1	90	51.664	ENSEBUG00000003449	trmt1	75	54.423	Eptatretus_burgeri
ENSCAFG00000017070	TRMT1	98	89.263	ENSEASG00005004050	TRMT1	100	89.168	Equus_asinus_asinus
ENSCAFG00000017070	TRMT1	98	89.583	ENSECAG00000016149	TRMT1	100	89.482	Equus_caballus
ENSCAFG00000017070	TRMT1	62	71.788	ENSEEUG00000014102	-	100	71.788	Erinaceus_europaeus
ENSCAFG00000017070	TRMT1	90	65.104	ENSELUG00000021659	trmt1	85	65.104	Esox_lucius
ENSCAFG00000017070	TRMT1	100	93.878	ENSFCAG00000000483	TRMT1	99	93.578	Felis_catus
ENSCAFG00000017070	TRMT1	99	84.301	ENSFDAG00000007386	TRMT1	99	83.686	Fukomys_damarensis
ENSCAFG00000017070	TRMT1	89	66.143	ENSFHEG00000012865	trmt1	88	69.508	Fundulus_heteroclitus
ENSCAFG00000017070	TRMT1	90	60.771	ENSGMOG00000006564	trmt1	98	61.296	Gadus_morhua
ENSCAFG00000017070	TRMT1	91	67.241	ENSGAFG00000011862	trmt1	89	67.642	Gambusia_affinis
ENSCAFG00000017070	TRMT1	93	62.771	ENSGACG00000000227	trmt1	99	61.353	Gasterosteus_aculeatus
ENSCAFG00000017070	TRMT1	93	69.799	ENSGAGG00000016432	TRMT1	87	69.799	Gopherus_agassizii
ENSCAFG00000017070	TRMT1	98	90.865	ENSGGOG00000014007	TRMT1	99	89.755	Gorilla_gorilla
ENSCAFG00000017070	TRMT1	92	56.949	ENSHBUG00000008821	trmt1	97	56.949	Haplochromis_burtoni
ENSCAFG00000017070	TRMT1	99	85.150	ENSHGLG00000015972	TRMT1	99	85.015	Heterocephalus_glaber_female
ENSCAFG00000017070	TRMT1	99	79.022	ENSHGLG00100018112	TRMT1	99	78.779	Heterocephalus_glaber_male
ENSCAFG00000017070	TRMT1	90	64.098	ENSHCOG00000009447	trmt1	88	64.098	Hippocampus_comes
ENSCAFG00000017070	TRMT1	91	65.546	ENSIPUG00000002899	trmt1	86	65.546	Ictalurus_punctatus
ENSCAFG00000017070	TRMT1	100	87.931	ENSSTOG00000012531	TRMT1	100	87.179	Ictidomys_tridecemlineatus
ENSCAFG00000017070	TRMT1	92	86.633	ENSJJAG00000017154	Trmt1	100	81.627	Jaculus_jaculus
ENSCAFG00000017070	TRMT1	90	67.776	ENSKMAG00000011809	trmt1	98	65.313	Kryptolebias_marmoratus
ENSCAFG00000017070	TRMT1	90	67.250	ENSLBEG00000012703	trmt1	84	67.250	Labrus_bergylta
ENSCAFG00000017070	TRMT1	90	57.949	ENSLACG00000014585	TRMT1	99	56.129	Latimeria_chalumnae
ENSCAFG00000017070	TRMT1	91	61.630	ENSLOCG00000006479	trmt1	99	62.139	Lepisosteus_oculatus
ENSCAFG00000017070	TRMT1	98	88.676	ENSLAFG00000014072	TRMT1	100	87.982	Loxodonta_africana
ENSCAFG00000017070	TRMT1	100	90.267	ENSMFAG00000033143	TRMT1	100	89.124	Macaca_fascicularis
ENSCAFG00000017070	TRMT1	100	83.438	ENSMMUG00000001167	TRMT1	99	82.801	Macaca_mulatta
ENSCAFG00000017070	TRMT1	100	90.110	ENSMNEG00000037867	TRMT1	100	88.973	Macaca_nemestrina
ENSCAFG00000017070	TRMT1	100	89.796	ENSMLEG00000016142	TRMT1	99	88.991	Mandrillus_leucophaeus
ENSCAFG00000017070	TRMT1	90	68.182	ENSMAMG00000004357	trmt1	85	68.182	Mastacembelus_armatus
ENSCAFG00000017070	TRMT1	90	65.331	ENSMZEG00005014510	trmt1	85	65.331	Maylandia_zebra
ENSCAFG00000017070	TRMT1	98	83.840	ENSMAUG00000011134	Trmt1	100	81.682	Mesocricetus_auratus
ENSCAFG00000017070	TRMT1	99	88.994	ENSMICG00000000793	TRMT1	100	88.218	Microcebus_murinus
ENSCAFG00000017070	TRMT1	97	85.203	ENSMOCG00000015895	Trmt1	100	82.132	Microtus_ochrogaster
ENSCAFG00000017070	TRMT1	90	67.075	ENSMMOG00000011097	trmt1	92	67.075	Mola_mola
ENSCAFG00000017070	TRMT1	96	76.375	ENSMODG00000011619	TRMT1	99	76.375	Monodelphis_domestica
ENSCAFG00000017070	TRMT1	100	83.463	MGP_CAROLIEiJ_G0031304	Trmt1	100	84.411	Mus_caroli
ENSCAFG00000017070	TRMT1	100	83.307	ENSMUSG00000001909	Trmt1	100	83.650	Mus_musculus
ENSCAFG00000017070	TRMT1	100	83.307	MGP_SPRETEiJ_G0032422	Trmt1	100	83.650	Mus_spretus
ENSCAFG00000017070	TRMT1	100	94.662	ENSMPUG00000004210	TRMT1	100	91.286	Mustela_putorius_furo
ENSCAFG00000017070	TRMT1	100	90.267	ENSMLUG00000012809	TRMT1	99	88.889	Myotis_lucifugus
ENSCAFG00000017070	TRMT1	99	83.386	ENSNGAG00000022486	Trmt1	97	83.256	Nannospalax_galili
ENSCAFG00000017070	TRMT1	78	68.249	ENSNBRG00000024376	trmt1	85	68.249	Neolamprologus_brichardi
ENSCAFG00000017070	TRMT1	79	90.031	ENSNLEG00000013019	-	99	88.462	Nomascus_leucogenys
ENSCAFG00000017070	TRMT1	94	76.087	ENSMEUG00000013756	TRMT1	100	76.087	Notamacropus_eugenii
ENSCAFG00000017070	TRMT1	82	87.444	ENSOPRG00000009471	-	82	87.444	Ochotona_princeps
ENSCAFG00000017070	TRMT1	98	86.443	ENSODEG00000010323	TRMT1	99	85.276	Octodon_degus
ENSCAFG00000017070	TRMT1	94	66.223	ENSONIG00000000400	trmt1	99	64.904	Oreochromis_niloticus
ENSCAFG00000017070	TRMT1	79	90.693	ENSOCUG00000021934	TRMT1	99	89.524	Oryctolagus_cuniculus
ENSCAFG00000017070	TRMT1	91	62.139	ENSORLG00000020074	trmt1	92	62.139	Oryzias_latipes
ENSCAFG00000017070	TRMT1	91	64.777	ENSORLG00020007561	trmt1	91	64.605	Oryzias_latipes_hni
ENSCAFG00000017070	TRMT1	91	65.292	ENSORLG00015006547	trmt1	88	65.292	Oryzias_latipes_hsok
ENSCAFG00000017070	TRMT1	92	65.247	ENSOMEG00000019343	trmt1	88	65.247	Oryzias_melastigma
ENSCAFG00000017070	TRMT1	97	86.710	ENSOGAG00000025576	TRMT1	99	85.374	Otolemur_garnettii
ENSCAFG00000017070	TRMT1	100	73.479	ENSOARG00000009397	TRMT1	98	72.143	Ovis_aries
ENSCAFG00000017070	TRMT1	100	85.086	ENSPPRG00000012117	TRMT1	100	85.077	Panthera_pardus
ENSCAFG00000017070	TRMT1	78	95.886	ENSPTIG00000008833	TRMT1	97	95.441	Panthera_tigris_altaica
ENSCAFG00000017070	TRMT1	98	90.545	ENSPTRG00000010557	TRMT1	99	89.602	Pan_troglodytes
ENSCAFG00000017070	TRMT1	99	69.255	ENSPTRG00000050421	-	96	69.255	Pan_troglodytes
ENSCAFG00000017070	TRMT1	100	90.267	ENSPANG00000009247	TRMT1	100	88.822	Papio_anubis
ENSCAFG00000017070	TRMT1	88	74.268	ENSPANG00000034058	-	96	74.268	Papio_anubis
ENSCAFG00000017070	TRMT1	91	68.041	ENSPKIG00000005309	trmt1	85	67.399	Paramormyrops_kingsleyae
ENSCAFG00000017070	TRMT1	88	60.284	ENSPSIG00000008762	TRMT1	80	60.284	Pelodiscus_sinensis
ENSCAFG00000017070	TRMT1	90	65.909	ENSPMGG00000019764	trmt1	90	65.909	Periophthalmus_magnuspinnatus
ENSCAFG00000017070	TRMT1	97	86.613	ENSPEMG00000016247	Trmt1	100	84.084	Peromyscus_maniculatus_bairdii
ENSCAFG00000017070	TRMT1	91	59.725	ENSPMAG00000004329	trmt1	91	59.725	Petromyzon_marinus
ENSCAFG00000017070	TRMT1	96	76.230	ENSPCIG00000019273	TRMT1	99	74.455	Phascolarctos_cinereus
ENSCAFG00000017070	TRMT1	90	69.686	ENSPFOG00000008527	trmt1	97	64.873	Poecilia_formosa
ENSCAFG00000017070	TRMT1	90	69.512	ENSPLAG00000018788	trmt1	97	66.783	Poecilia_latipinna
ENSCAFG00000017070	TRMT1	90	69.580	ENSPMEG00000013120	trmt1	97	64.669	Poecilia_mexicana
ENSCAFG00000017070	TRMT1	90	68.174	ENSPREG00000000211	trmt1	85	68.576	Poecilia_reticulata
ENSCAFG00000017070	TRMT1	98	90.545	ENSPPYG00000009622	TRMT1	99	89.755	Pongo_abelii
ENSCAFG00000017070	TRMT1	99	80.794	ENSPCAG00000003698	TRMT1	99	80.680	Procavia_capensis
ENSCAFG00000017070	TRMT1	99	89.308	ENSPCOG00000008653	TRMT1	99	89.008	Propithecus_coquereli
ENSCAFG00000017070	TRMT1	100	91.366	ENSPVAG00000015076	TRMT1	99	91.131	Pteropus_vampyrus
ENSCAFG00000017070	TRMT1	90	63.763	ENSPNYG00000013960	trmt1	92	63.763	Pundamilia_nyererei
ENSCAFG00000017070	TRMT1	84	68.476	ENSPNAG00000024859	trmt1	88	68.476	Pygocentrus_nattereri
ENSCAFG00000017070	TRMT1	100	83.775	ENSRNOG00000002914	Trmt1	100	83.775	Rattus_norvegicus
ENSCAFG00000017070	TRMT1	100	89.639	ENSRBIG00000038324	TRMT1	100	88.671	Rhinopithecus_bieti
ENSCAFG00000017070	TRMT1	95	70.627	ENSRBIG00000037505	-	99	69.207	Rhinopithecus_bieti
ENSCAFG00000017070	TRMT1	100	89.482	ENSRROG00000028599	TRMT1	100	88.520	Rhinopithecus_roxellana
ENSCAFG00000017070	TRMT1	95	69.802	ENSRROG00000031847	-	98	68.429	Rhinopithecus_roxellana
ENSCAFG00000017070	TRMT1	80	37.127	YDR120C	-	92	37.757	Saccharomyces_cerevisiae
ENSCAFG00000017070	TRMT1	100	84.144	ENSSBOG00000028861	TRMT1	99	85.737	Saimiri_boliviensis_boliviensis
ENSCAFG00000017070	TRMT1	92	78.535	ENSSHAG00000014381	TRMT1	98	76.936	Sarcophilus_harrisii
ENSCAFG00000017070	TRMT1	91	67.647	ENSSFOG00015004139	trmt1	89	66.007	Scleropages_formosus
ENSCAFG00000017070	TRMT1	91	67.009	ENSSMAG00000021136	trmt1	87	67.179	Scophthalmus_maximus
ENSCAFG00000017070	TRMT1	90	67.657	ENSSDUG00000012740	trmt1	84	67.657	Seriola_dumerili
ENSCAFG00000017070	TRMT1	90	67.308	ENSSLDG00000005971	trmt1	84	67.308	Seriola_lalandi_dorsalis
ENSCAFG00000017070	TRMT1	85	86.630	ENSSARG00000005138	TRMT1	99	85.790	Sorex_araneus
ENSCAFG00000017070	TRMT1	91	54.437	ENSSPUG00000001084	TRMT1	91	54.778	Sphenodon_punctatus
ENSCAFG00000017070	TRMT1	91	64.605	ENSSPAG00000007153	trmt1	95	64.433	Stegastes_partitus
ENSCAFG00000017070	TRMT1	100	91.536	ENSSSCG00000013744	TRMT1	100	91.536	Sus_scrofa
ENSCAFG00000017070	TRMT1	88	63.445	ENSTRUG00000010700	trmt1	85	63.589	Takifugu_rubripes
ENSCAFG00000017070	TRMT1	91	65.517	ENSTNIG00000018808	trmt1	99	65.517	Tetraodon_nigroviridis
ENSCAFG00000017070	TRMT1	100	87.755	ENSTTRG00000006379	TRMT1	99	87.156	Tursiops_truncatus
ENSCAFG00000017070	TRMT1	100	94.976	ENSUAMG00000022911	TRMT1	99	94.470	Ursus_americanus
ENSCAFG00000017070	TRMT1	100	94.505	ENSUMAG00000006027	TRMT1	100	94.505	Ursus_maritimus
ENSCAFG00000017070	TRMT1	100	98.901	ENSVVUG00000024177	TRMT1	100	98.792	Vulpes_vulpes
ENSCAFG00000017070	TRMT1	72	71.800	ENSXETG00000033863	TRMT1	92	71.800	Xenopus_tropicalis
ENSCAFG00000017070	TRMT1	91	67.235	ENSXCOG00000015733	trmt1	90	67.632	Xiphophorus_couchianus
ENSCAFG00000017070	TRMT1	90	67.764	ENSXMAG00000013823	trmt1	98	68.221	Xiphophorus_maculatus