EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSCAFG00000017093 (Gene tree)
Gene ID
476694
Gene Symbol
CALR
Alias
-
Full Name
calreticulin
Gene Type
protein_coding
Species
Canis_familiaris
Status
putative
Strand
Minus strand
Length
4816 bases
Position
chr20:49250753-49255568
Accession
54585
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCAFP00000025174CalreticulinPF00262.181.6e-8012
ENSCAFP00000025174CalreticulinPF00262.181.6e-8022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCAFT00000027074-1575XM_862217ENSCAFP00000025174406 (aa)XP_867310F6UYJ9
Gene Model
Click here to download ENSCAFG00000017093's gene model file
Pathways
Pathway IDPathway NameSource
cfa04141Protein processing in endoplasmic reticulumKEGG
cfa04145PhagosomeKEGG
cfa04612Antigen processing and presentationKEGG
cfa05142Chagas disease (American trypanosomiasis)KEGG
cfa05163Human cytomegalovirus infectionKEGG
cfa05166Human T-cell leukemia virus 1 infectionKEGG
cfa05168Herpes simplex virus 1 infectionKEGG
cfa05169Epstein-Barr virus infectionKEGG
cfa05170Human immunodeficiency virus 1 infectionKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017093's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCAFG00000017093CALR8137.692ENSCAFG00000003696CLGN6237.692
ENSCAFG00000017093CALR9251.337ENSCAFG00000015694CALR38552.924
ENSCAFG00000017093CALR8237.845ENSCAFG00000000348CANX8140.549
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCAFG00000017093CALR9377.394ENSAMXG00000018577-8279.885Astyanax_mexicanus
ENSCAFG00000017093CALR8982.645ENSCPBG00000023916-8587.619Chrysemys_picta_bellii
ENSCAFG00000017093CALR8974.515ENSDARG00000103979calr3a8376.879Danio_rerio
ENSCAFG00000017093CALR9170.430FBgn0005585Calr8471.720Drosophila_melanogaster
ENSCAFG00000017093CALR8233.584FBgn0264077Cnx14D6233.584Drosophila_melanogaster
ENSCAFG00000017093CALR8971.350ENSEBUG00000008568calr3a8073.469Eptatretus_burgeri
ENSCAFG00000017093CALR8967.956ENSELUG00000008294-8274.922Esox_lucius
ENSCAFG00000017093CALR9667.822ENSFHEG00000000123-9069.409Fundulus_heteroclitus
ENSCAFG00000017093CALR8976.519ENSMAMG00000003716-8078.613Mastacembelus_armatus
ENSCAFG00000017093CALR9674.177ENSMMOG00000020031-8775.521Mola_mola
ENSCAFG00000017093CALR8597.695ENSMLUG00000012776-8497.414Myotis_lucifugus
ENSCAFG00000017093CALR8967.956ENSORLG00000017171-8069.653Oryzias_latipes
ENSCAFG00000017093CALR8977.624ENSOMEG00000010424-8279.598Oryzias_melastigma
ENSCAFG00000017093CALR8238.750ENSPSIG00000003895-6938.791Pelodiscus_sinensis
ENSCAFG00000017093CALR8285.970ENSPSIG00000012928-8585.970Pelodiscus_sinensis
ENSCAFG00000017093CALR8237.343ENSPSIG00000009344-6238.035Pelodiscus_sinensis
ENSCAFG00000017093CALR8977.348ENSPNAG00000016813-8279.827Pygocentrus_nattereri
ENSCAFG00000017093CALR9371.842ENSSMAG00000005047calr3a7968.391Scophthalmus_maximus
ENSCAFG00000017093CALR8239.000ENSSDUG00000002378-5439.798Seriola_dumerili
ENSCAFG00000017093CALR8239.000ENSSLDG00000020527-6140.922Seriola_lalandi_dorsalis
ENSCAFG00000017093CALR8876.880ENSTRUG00000004597-8078.902Takifugu_rubripes
ENSCAFG00000017093CALR8239.850ENSTRUG00000003449-5439.850Takifugu_rubripes
ENSCAFG00000017093CALR8979.834ENSXETG00000007937calr8481.897Xenopus_tropicalis
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0005509calcium ion binding-ISSFunction
GO:0030246carbohydrate binding-IEAFunction
GO:0033018sarcoplasmic reticulum lumen-IEAComponent
GO:0050821protein stabilization-ISSProcess

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