EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSCAFG00000017143 (Gene tree)
Gene ID: 479795
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 23788 bases
Position: chr6:18276734-18300521
Accession: 479795
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000025255	eIF-3c_N	PF05470.12	8.7e-273	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000027155	-	4271	XM_536923	ENSCAFP00000025255	913 (aa)	XP_536923	E2RQP6

Gene Model

Click here to download ENSCAFG00000017143's gene model file

Pathways

Pathway ID	Pathway Name	Source
cfa03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017143's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017143	-	100	98.468	ENSG00000205609	EIF3CL	100	98.468	Homo_sapiens
ENSCAFG00000017143	-	100	98.576	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSCAFG00000017143	-	99	76.165	ENSAPOG00000024092	eif3c	92	84.339	Acanthochromis_polyacanthus
ENSCAFG00000017143	-	100	99.671	ENSAMEG00000015454	-	100	99.671	Ailuropoda_melanoleuca
ENSCAFG00000017143	-	99	73.817	ENSACIG00000015082	eif3c	93	84.219	Amphilophus_citrinellus
ENSCAFG00000017143	-	94	84.158	ENSAOCG00000021466	eif3c	98	76.605	Amphiprion_ocellaris
ENSCAFG00000017143	-	94	84.158	ENSAPEG00000010521	eif3c	98	76.605	Amphiprion_percula
ENSCAFG00000017143	-	99	76.815	ENSATEG00000019001	eif3c	98	77.065	Anabas_testudineus
ENSCAFG00000017143	-	100	86.245	ENSACAG00000005937	-	100	86.354	Anolis_carolinensis
ENSCAFG00000017143	-	100	98.467	ENSANAG00000020640	-	100	98.467	Aotus_nancymaae
ENSCAFG00000017143	-	84	80.945	ENSACLG00000009322	eif3c	92	80.945	Astatotilapia_calliptera
ENSCAFG00000017143	-	84	83.802	ENSACLG00000009347	eif3c	98	83.802	Astatotilapia_calliptera
ENSCAFG00000017143	-	99	77.033	ENSAMXG00000020949	eif3c	98	77.074	Astyanax_mexicanus
ENSCAFG00000017143	-	100	98.357	ENSBTAG00000006543	EIF3CL	100	98.357	Bos_taurus
ENSCAFG00000017143	-	95	42.649	WBGene00001226	eif-3.C	93	43.581	Caenorhabditis_elegans
ENSCAFG00000017143	-	100	98.248	ENSCJAG00000006341	-	100	98.248	Callithrix_jacchus
ENSCAFG00000017143	-	100	99.890	ENSCAFG00020017587	-	100	99.890	Canis_lupus_dingo
ENSCAFG00000017143	-	100	98.686	ENSCHIG00000024795	-	100	98.686	Capra_hircus
ENSCAFG00000017143	-	100	98.028	ENSTSYG00000003486	-	100	98.028	Carlito_syrichta
ENSCAFG00000017143	-	96	89.128	ENSCAPG00000015887	-	100	89.128	Cavia_aperea
ENSCAFG00000017143	-	100	98.467	ENSCPOG00000007533	-	100	98.467	Cavia_porcellus
ENSCAFG00000017143	-	100	93.100	ENSCCAG00000027724	-	100	92.333	Cebus_capucinus
ENSCAFG00000017143	-	99	83.260	ENSCCAG00000029099	-	99	81.978	Cebus_capucinus
ENSCAFG00000017143	-	100	97.590	ENSCCAG00000034928	-	100	97.590	Cebus_capucinus
ENSCAFG00000017143	-	100	98.467	ENSCATG00000032673	-	100	98.467	Cercocebus_atys
ENSCAFG00000017143	-	100	97.700	ENSCLAG00000011094	-	100	97.700	Chinchilla_lanigera
ENSCAFG00000017143	-	100	98.467	ENSCSAG00000006297	-	100	98.467	Chlorocebus_sabaeus
ENSCAFG00000017143	-	55	83.012	ENSCHOG00000003120	-	88	83.012	Choloepus_hoffmanni
ENSCAFG00000017143	-	71	92.038	ENSCPBG00000012407	-	92	83.537	Chrysemys_picta_bellii
ENSCAFG00000017143	-	76	57.391	ENSCSAVG00000006744	-	96	56.842	Ciona_savignyi
ENSCAFG00000017143	-	100	98.467	ENSCANG00000033626	-	100	98.467	Colobus_angolensis_palliatus
ENSCAFG00000017143	-	100	97.481	ENSCGRG00001015265	EIF3C	100	97.481	Cricetulus_griseus_chok1gshd
ENSCAFG00000017143	-	100	75.109	ENSCSEG00000017770	eif3c	100	75.218	Cynoglossus_semilaevis
ENSCAFG00000017143	-	99	75.708	ENSCVAG00000005402	eif3c	98	81.981	Cyprinodon_variegatus
ENSCAFG00000017143	-	99	76.362	ENSDARG00000016443	eif3c	98	76.170	Danio_rerio
ENSCAFG00000017143	-	100	99.014	ENSDNOG00000031497	-	100	99.014	Dasypus_novemcinctus
ENSCAFG00000017143	-	100	98.576	ENSDORG00000016471	Eif3c	100	98.576	Dipodomys_ordii
ENSCAFG00000017143	-	98	51.109	FBgn0034258	eIF3c	95	51.271	Drosophila_melanogaster
ENSCAFG00000017143	-	92	98.624	ENSETEG00000013527	-	92	98.624	Echinops_telfairi
ENSCAFG00000017143	-	99	62.983	ENSEBUG00000001629	eif3c	99	63.617	Eptatretus_burgeri
ENSCAFG00000017143	-	100	99.124	ENSECAG00000008746	-	100	99.124	Equus_caballus
ENSCAFG00000017143	-	64	64.456	ENSEEUG00000000726	-	64	64.456	Erinaceus_europaeus
ENSCAFG00000017143	-	87	97.494	ENSEEUG00000006148	-	100	97.494	Erinaceus_europaeus
ENSCAFG00000017143	-	99	76.061	ENSELUG00000022257	eif3c	92	83.914	Esox_lucius
ENSCAFG00000017143	-	100	99.014	ENSFCAG00000015782	-	100	99.014	Felis_catus
ENSCAFG00000017143	-	100	98.138	ENSFDAG00000003588	-	100	98.138	Fukomys_damarensis
ENSCAFG00000017143	-	99	76.432	ENSFHEG00000014154	EIF3C	98	76.790	Fundulus_heteroclitus
ENSCAFG00000017143	-	97	75.112	ENSGMOG00000016885	eif3c	99	76.121	Gadus_morhua
ENSCAFG00000017143	-	96	76.984	ENSGACG00000007652	eif3c	100	76.227	Gasterosteus_aculeatus
ENSCAFG00000017143	-	92	83.353	ENSGAGG00000006666	-	100	83.943	Gopherus_agassizii
ENSCAFG00000017143	-	99	96.040	ENSGGOG00000026919	EIF3C	100	98.294	Gorilla_gorilla
ENSCAFG00000017143	-	54	97.683	ENSGGOG00000022677	-	100	97.683	Gorilla_gorilla
ENSCAFG00000017143	-	100	98.467	ENSHGLG00000011445	EIF3C	100	98.467	Heterocephalus_glaber_female
ENSCAFG00000017143	-	100	98.467	ENSHGLG00100000217	EIF3C	100	98.467	Heterocephalus_glaber_male
ENSCAFG00000017143	-	99	76.004	ENSHCOG00000019694	eif3c	98	75.791	Hippocampus_comes
ENSCAFG00000017143	-	99	75.570	ENSIPUG00000016878	eif3c	98	76.605	Ictalurus_punctatus
ENSCAFG00000017143	-	100	98.795	ENSSTOG00000021278	-	100	98.795	Ictidomys_tridecemlineatus
ENSCAFG00000017143	-	100	97.590	ENSJJAG00000012722	Eif3c	100	97.590	Jaculus_jaculus
ENSCAFG00000017143	-	99	76.999	ENSKMAG00000021662	eif3c	97	76.139	Kryptolebias_marmoratus
ENSCAFG00000017143	-	99	75.691	ENSLBEG00000023370	eif3c	99	74.973	Labrus_bergylta
ENSCAFG00000017143	-	100	78.953	ENSLACG00000000770	eif3c	100	80.413	Latimeria_chalumnae
ENSCAFG00000017143	-	100	98.467	ENSLAFG00000027426	-	100	98.467	Loxodonta_africana
ENSCAFG00000017143	-	100	98.467	ENSMFAG00000041930	-	100	98.467	Macaca_fascicularis
ENSCAFG00000017143	-	100	98.467	ENSMMUG00000011798	-	100	98.467	Macaca_mulatta
ENSCAFG00000017143	-	100	98.467	ENSMNEG00000023915	-	100	98.467	Macaca_nemestrina
ENSCAFG00000017143	-	100	98.467	ENSMLEG00000027529	-	100	98.467	Mandrillus_leucophaeus
ENSCAFG00000017143	-	99	75.991	ENSMAMG00000012512	eif3c	95	84.667	Mastacembelus_armatus
ENSCAFG00000017143	-	84	81.107	ENSMZEG00005013685	eif3c	92	81.107	Maylandia_zebra
ENSCAFG00000017143	-	99	72.637	ENSMZEG00005013699	eif3c	99	71.506	Maylandia_zebra
ENSCAFG00000017143	-	100	97.590	ENSMAUG00000010621	Eif3c	100	97.590	Mesocricetus_auratus
ENSCAFG00000017143	-	100	98.795	ENSMICG00000036748	-	100	98.795	Microcebus_murinus
ENSCAFG00000017143	-	100	95.181	ENSMOCG00000004204	Eif3c	100	95.181	Microtus_ochrogaster
ENSCAFG00000017143	-	100	72.210	ENSMMOG00000001572	eif3c	72	82.838	Mola_mola
ENSCAFG00000017143	-	100	94.858	ENSMODG00000015579	-	100	94.858	Monodelphis_domestica
ENSCAFG00000017143	-	84	84.577	ENSMALG00000008907	eif3c	92	84.437	Monopterus_albus
ENSCAFG00000017143	-	100	97.043	MGP_CAROLIEiJ_G0030451	Eif3c	100	97.043	Mus_caroli
ENSCAFG00000017143	-	100	97.043	ENSMUSG00000030738	Eif3c	100	97.043	Mus_musculus
ENSCAFG00000017143	-	100	96.605	MGP_PahariEiJ_G0013661	Eif3c	100	96.605	Mus_pahari
ENSCAFG00000017143	-	100	97.043	MGP_SPRETEiJ_G0031565	Eif3c	100	97.043	Mus_spretus
ENSCAFG00000017143	-	96	98.977	ENSMPUG00000012732	-	100	98.977	Mustela_putorius_furo
ENSCAFG00000017143	-	100	97.809	ENSMLUG00000015558	-	100	97.809	Myotis_lucifugus
ENSCAFG00000017143	-	100	98.248	ENSNGAG00000007177	-	100	98.248	Nannospalax_galili
ENSCAFG00000017143	-	93	87.273	ENSNGAG00000010901	-	98	87.273	Nannospalax_galili
ENSCAFG00000017143	-	100	83.495	ENSNLEG00000001425	-	91	93.333	Nomascus_leucogenys
ENSCAFG00000017143	-	100	77.814	ENSMEUG00000009939	-	99	77.838	Notamacropus_eugenii
ENSCAFG00000017143	-	89	64.557	ENSMEUG00000005317	-	100	62.025	Notamacropus_eugenii
ENSCAFG00000017143	-	100	98.248	ENSOPRG00000000931	-	100	98.248	Ochotona_princeps
ENSCAFG00000017143	-	100	98.138	ENSODEG00000013508	-	100	98.138	Octodon_degus
ENSCAFG00000017143	-	66	63.531	ENSONIG00000011434	eif3c	99	63.531	Oreochromis_niloticus
ENSCAFG00000017143	-	100	91.272	ENSOANG00000011410	-	100	91.272	Ornithorhynchus_anatinus
ENSCAFG00000017143	-	100	99.124	ENSOCUG00000022489	-	100	99.124	Oryctolagus_cuniculus
ENSCAFG00000017143	-	99	75.388	ENSORLG00000006318	eif3c	98	73.043	Oryzias_latipes
ENSCAFG00000017143	-	99	75.388	ENSORLG00020015713	eif3c	96	83.220	Oryzias_latipes_hni
ENSCAFG00000017143	-	99	75.499	ENSORLG00015013772	eif3c	97	74.834	Oryzias_latipes_hsok
ENSCAFG00000017143	-	100	75.081	ENSOMEG00000020450	eif3c	100	74.758	Oryzias_melastigma
ENSCAFG00000017143	-	100	98.467	ENSOGAG00000012737	-	100	98.467	Otolemur_garnettii
ENSCAFG00000017143	-	100	98.686	ENSOARG00000002892	-	100	98.686	Ovis_aries
ENSCAFG00000017143	-	100	99.014	ENSPPRG00000012336	-	100	99.014	Panthera_pardus
ENSCAFG00000017143	-	100	99.014	ENSPTIG00000011712	-	100	99.014	Panthera_tigris_altaica
ENSCAFG00000017143	-	100	98.467	ENSPANG00000021151	-	100	98.467	Papio_anubis
ENSCAFG00000017143	-	99	76.906	ENSPKIG00000002049	eif3c	98	77.451	Paramormyrops_kingsleyae
ENSCAFG00000017143	-	89	85.075	ENSPMGG00000005409	eif3c	94	85.075	Periophthalmus_magnuspinnatus
ENSCAFG00000017143	-	100	96.057	ENSPEMG00000010899	Eif3c	100	96.057	Peromyscus_maniculatus_bairdii
ENSCAFG00000017143	-	100	94.967	ENSPCIG00000025206	-	100	94.967	Phascolarctos_cinereus
ENSCAFG00000017143	-	99	76.004	ENSPFOG00000004476	eif3c	98	75.652	Poecilia_formosa
ENSCAFG00000017143	-	100	71.554	ENSPLAG00000017480	eif3c	92	83.914	Poecilia_latipinna
ENSCAFG00000017143	-	99	76.522	ENSPMEG00000019512	eif3c	98	75.734	Poecilia_mexicana
ENSCAFG00000017143	-	100	95.290	ENSPPYG00000007227	-	100	95.400	Pongo_abelii
ENSCAFG00000017143	-	66	99.334	ENSPCAG00000012710	-	100	99.334	Procavia_capensis
ENSCAFG00000017143	-	100	99.233	ENSPCOG00000019289	-	100	99.233	Propithecus_coquereli
ENSCAFG00000017143	-	100	98.467	ENSPVAG00000005804	-	100	98.467	Pteropus_vampyrus
ENSCAFG00000017143	-	65	69.079	ENSPNYG00000016530	eif3c	81	81.212	Pundamilia_nyererei
ENSCAFG00000017143	-	99	77.133	ENSPNAG00000024040	eif3c	93	83.555	Pygocentrus_nattereri
ENSCAFG00000017143	-	100	96.933	ENSRNOG00000018761	Eif3c	100	96.933	Rattus_norvegicus
ENSCAFG00000017143	-	97	98.414	ENSRBIG00000044009	-	98	96.094	Rhinopithecus_bieti
ENSCAFG00000017143	-	100	98.467	ENSRROG00000043626	-	100	98.467	Rhinopithecus_roxellana
ENSCAFG00000017143	-	77	31.365	YMR309C	-	79	30.699	Saccharomyces_cerevisiae
ENSCAFG00000017143	-	100	98.138	ENSSBOG00000032155	-	100	98.138	Saimiri_boliviensis_boliviensis
ENSCAFG00000017143	-	96	94.451	ENSSHAG00000011808	-	100	94.451	Sarcophilus_harrisii
ENSCAFG00000017143	-	99	75.847	ENSSFOG00015021823	eif3c	98	76.092	Scleropages_formosus
ENSCAFG00000017143	-	97	76.966	ENSSMAG00000016638	eif3c	97	76.854	Scophthalmus_maximus
ENSCAFG00000017143	-	97	79.649	ENSSDUG00000023117	eif3c	98	76.580	Seriola_dumerili
ENSCAFG00000017143	-	99	76.030	ENSSLDG00000009706	eif3c	96	83.660	Seriola_lalandi_dorsalis
ENSCAFG00000017143	-	100	83.716	ENSSPUG00000016470	-	100	85.027	Sphenodon_punctatus
ENSCAFG00000017143	-	100	76.082	ENSSPAG00000000426	eif3c	100	76.196	Stegastes_partitus
ENSCAFG00000017143	-	100	99.014	ENSSSCG00000034927	-	100	99.014	Sus_scrofa
ENSCAFG00000017143	-	99	74.277	ENSTRUG00000008951	eif3c	99	74.920	Takifugu_rubripes
ENSCAFG00000017143	-	100	74.130	ENSTNIG00000015210	eif3c	100	74.891	Tetraodon_nigroviridis
ENSCAFG00000017143	-	100	98.576	ENSTTRG00000005880	-	100	98.576	Tursiops_truncatus
ENSCAFG00000017143	-	72	99.695	ENSUAMG00000001127	-	91	100.000	Ursus_americanus
ENSCAFG00000017143	-	100	99.562	ENSUMAG00000010927	-	100	99.562	Ursus_maritimus
ENSCAFG00000017143	-	100	98.357	ENSVVUG00000025970	-	100	98.357	Vulpes_vulpes
ENSCAFG00000017143	-	100	78.510	ENSXETG00000002941	eif3c	100	79.180	Xenopus_tropicalis
ENSCAFG00000017143	-	100	75.918	ENSXMAG00000013796	eif3c	100	75.270	Xiphophorus_maculatus