EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000017180 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Minus strand
Length: 945 bases
Position: chr4:45023015-45023959
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000025296	RRM_1	PF00076.22	3.4e-26	1	2
ENSCAFP00000025296	RRM_1	PF00076.22	3.4e-26	2	2
ENSCAFP00000025296	HnRNPA1	PF11627.8	1.5e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000027199	-	945	-	ENSCAFP00000025296	314 (aa)	-	F1PQB0

Gene Model

Click here to download ENSCAFG00000017180's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017180's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000017180	-	92	56.314	ENSCAFG00000017424	-	99	56.314
ENSCAFG00000017180	-	66	74.057	ENSCAFG00000002232	-	93	64.610
ENSCAFG00000017180	-	94	76.254	ENSCAFG00000000389	-	94	76.254
ENSCAFG00000017180	-	89	78.596	ENSCAFG00000000687	-	94	78.840
ENSCAFG00000017180	-	72	89.333	ENSCAFG00000030052	-	82	88.646
ENSCAFG00000017180	-	94	78.333	ENSCAFG00000006663	-	94	79.000
ENSCAFG00000017180	-	59	83.598	ENSCAFG00000006580	-	95	73.654
ENSCAFG00000017180	-	93	80.000	ENSCAFG00000003493	-	93	81.000
ENSCAFG00000017180	-	88	81.633	ENSCAFG00000017316	-	93	70.569
ENSCAFG00000017180	-	95	70.642	ENSCAFG00000006036	-	75	81.633
ENSCAFG00000017180	-	93	65.421	ENSCAFG00000018580	-	72	79.545
ENSCAFG00000017180	-	76	34.694	ENSCAFG00000010283	MSI1	51	36.216
ENSCAFG00000017180	-	65	69.712	ENSCAFG00000005307	-	99	61.660
ENSCAFG00000017180	-	94	60.667	ENSCAFG00000013303	-	91	60.667
ENSCAFG00000017180	-	94	77.152	ENSCAFG00000006327	-	94	80.132
ENSCAFG00000017180	-	79	54.724	ENSCAFG00000006110	-	100	52.756
ENSCAFG00000017180	-	61	65.766	ENSCAFG00000013497	HNRNPA3	89	59.644
ENSCAFG00000017180	-	55	48.315	ENSCAFG00000001132	HNRNPA0	98	44.590
ENSCAFG00000017180	-	86	76.000	ENSCAFG00000019097	-	99	74.150
ENSCAFG00000017180	-	59	35.000	ENSCAFG00000019528	DAZAP1	66	35.119
ENSCAFG00000017180	-	94	69.725	ENSCAFG00000025274	-	73	81.633
ENSCAFG00000017180	-	94	69.900	ENSCAFG00000031044	-	94	67.893
ENSCAFG00000017180	-	61	65.657	ENSCAFG00000002885	HNRNPA2B1	93	52.819
ENSCAFG00000017180	-	57	32.984	ENSCAFG00000000241	HNRNPAB	59	36.420
ENSCAFG00000017180	-	94	69.900	ENSCAFG00000030783	-	94	67.893
ENSCAFG00000017180	-	94	76.821	ENSCAFG00000005164	-	91	77.483
ENSCAFG00000017180	-	99	78.370	ENSCAFG00000032455	-	94	79.734

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017180	-	86	79.310	ENSANAG00000031918	-	91	82.143	Aotus_nancymaae
ENSCAFG00000017180	-	87	79.496	ENSCHIG00000020351	-	93	79.795	Capra_hircus
ENSCAFG00000017180	-	52	69.939	ENSCGRG00001017212	-	91	70.000	Cricetulus_griseus_chok1gshd
ENSCAFG00000017180	-	94	55.000	ENSDNOG00000039534	-	93	53.443	Dasypus_novemcinctus
ENSCAFG00000017180	-	94	53.333	ENSDNOG00000030945	-	88	53.333	Dasypus_novemcinctus
ENSCAFG00000017180	-	94	67.333	ENSDNOG00000048335	-	93	68.667	Dasypus_novemcinctus
ENSCAFG00000017180	-	94	87.333	ENSDORG00000027821	-	94	87.333	Dipodomys_ordii
ENSCAFG00000017180	-	66	58.216	ENSETEG00000004129	-	68	59.893	Echinops_telfairi
ENSCAFG00000017180	-	93	46.644	ENSETEG00000010244	-	93	48.322	Echinops_telfairi
ENSCAFG00000017180	-	94	86.667	ENSFDAG00000021342	-	94	86.667	Fukomys_damarensis
ENSCAFG00000017180	-	94	86.667	ENSHGLG00000003139	HNRNPA1	94	86.667	Heterocephalus_glaber_female
ENSCAFG00000017180	-	90	67.820	ENSHGLG00100017719	-	93	68.836	Heterocephalus_glaber_male
ENSCAFG00000017180	-	94	86.667	ENSHGLG00100015974	HNRNPA1	94	86.667	Heterocephalus_glaber_male
ENSCAFG00000017180	-	80	69.841	ENSSTOG00000034519	-	80	69.841	Ictidomys_tridecemlineatus
ENSCAFG00000017180	-	94	51.613	ENSMNEG00000038539	-	91	53.433	Macaca_nemestrina
ENSCAFG00000017180	-	77	67.339	ENSMPUG00000008269	-	96	56.610	Mustela_putorius_furo
ENSCAFG00000017180	-	67	55.981	ENSNLEG00000032512	-	95	51.906	Nomascus_leucogenys
ENSCAFG00000017180	-	89	63.958	ENSPTIG00000013949	-	92	63.958	Panthera_tigris_altaica
ENSCAFG00000017180	-	89	80.282	ENSTBEG00000012511	-	99	80.282	Tupaia_belangeri