EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCAFG00000017258 (Gene tree)
Gene ID: 102152884
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein Sm D3 pseudogene
Gene Type: protein_coding
Species: Canis_familiaris
Status: putative
Strand: Plus strand
Length: 381 bases
Position: chrX:60094961-60095341
Accession: 102152884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000042139	LSM	PF01423.22	9.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000027332	-	381	XM_005641514	ENSCAFP00000042139	126 (aa)	XP_005641571	J9P8R0

Gene Model

Click here to download ENSCAFG00000017258's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCAFG00000017258's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000017258	-	100	99.206	ENSCAFG00000013864	-	100	99.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017258	-	100	99.206	ENSG00000100028	SNRPD3	100	99.206	Homo_sapiens
ENSCAFG00000017258	-	100	98.425	ENSAPOG00000007512	snrpd3l	100	98.425	Acanthochromis_polyacanthus
ENSCAFG00000017258	-	100	99.206	ENSAMEG00000013935	SNRPD3	100	99.206	Ailuropoda_melanoleuca
ENSCAFG00000017258	-	100	98.425	ENSACIG00000008871	snrpd3l	100	98.425	Amphilophus_citrinellus
ENSCAFG00000017258	-	100	98.425	ENSAOCG00000016743	snrpd3l	100	98.425	Amphiprion_ocellaris
ENSCAFG00000017258	-	84	99.057	ENSAOCG00000016759	-	98	99.057	Amphiprion_ocellaris
ENSCAFG00000017258	-	100	98.425	ENSAOCG00000008497	SNRPD3	100	98.425	Amphiprion_ocellaris
ENSCAFG00000017258	-	100	98.425	ENSAOCG00000022442	-	100	98.425	Amphiprion_ocellaris
ENSCAFG00000017258	-	84	99.057	ENSAPEG00000006260	-	98	99.057	Amphiprion_percula
ENSCAFG00000017258	-	100	98.425	ENSAPEG00000006273	snrpd3l	100	98.425	Amphiprion_percula
ENSCAFG00000017258	-	100	98.425	ENSATEG00000020556	snrpd3l	91	98.425	Anabas_testudineus
ENSCAFG00000017258	-	100	99.206	ENSAPLG00000008670	SNRPD3	100	99.206	Anas_platyrhynchos
ENSCAFG00000017258	-	100	99.206	ENSANAG00000026106	SNRPD3	100	99.206	Aotus_nancymaae
ENSCAFG00000017258	-	100	98.425	ENSACLG00000021295	snrpd3l	100	98.425	Astatotilapia_calliptera
ENSCAFG00000017258	-	100	94.531	ENSAMXG00000038984	snrpd3l	100	94.531	Astyanax_mexicanus
ENSCAFG00000017258	-	100	99.206	ENSBTAG00000021262	SNRPD3	100	99.206	Bos_taurus
ENSCAFG00000017258	-	94	60.800	WBGene00004914	snr-1	68	68.478	Caenorhabditis_elegans
ENSCAFG00000017258	-	100	99.206	ENSCJAG00000009630	SNRPD3	100	99.206	Callithrix_jacchus
ENSCAFG00000017258	-	100	99.206	ENSCAFG00020007165	-	100	99.206	Canis_lupus_dingo
ENSCAFG00000017258	-	100	99.206	ENSCHIG00000000057	SNRPD3	100	99.206	Capra_hircus
ENSCAFG00000017258	-	100	99.206	ENSTSYG00000007649	SNRPD3	100	99.206	Carlito_syrichta
ENSCAFG00000017258	-	100	99.206	ENSCAPG00000016432	-	100	99.206	Cavia_aperea
ENSCAFG00000017258	-	100	99.206	ENSCPOG00000033102	-	100	99.206	Cavia_porcellus
ENSCAFG00000017258	-	100	99.206	ENSCCAG00000035006	SNRPD3	100	99.206	Cebus_capucinus
ENSCAFG00000017258	-	100	99.206	ENSCATG00000038878	SNRPD3	100	99.206	Cercocebus_atys
ENSCAFG00000017258	-	100	99.206	ENSCLAG00000011403	SNRPD3	100	99.206	Chinchilla_lanigera
ENSCAFG00000017258	-	100	99.206	ENSCSAG00000010694	SNRPD3	100	99.206	Chlorocebus_sabaeus
ENSCAFG00000017258	-	100	99.206	ENSCPBG00000002065	SNRPD3	100	99.206	Chrysemys_picta_bellii
ENSCAFG00000017258	-	85	78.505	ENSCSAVG00000004708	-	80	78.505	Ciona_savignyi
ENSCAFG00000017258	-	100	99.206	ENSCANG00000032106	SNRPD3	100	99.206	Colobus_angolensis_palliatus
ENSCAFG00000017258	-	100	99.206	ENSCGRG00001021990	Snrpd3	100	99.206	Cricetulus_griseus_chok1gshd
ENSCAFG00000017258	-	100	99.206	ENSCGRG00000004280	Snrpd3	100	99.206	Cricetulus_griseus_crigri
ENSCAFG00000017258	-	100	96.850	ENSCVAG00000001276	snrpd3l	100	96.850	Cyprinodon_variegatus
ENSCAFG00000017258	-	100	89.764	ENSDARG00000013800	snrpd3	100	90.551	Danio_rerio
ENSCAFG00000017258	-	100	95.312	ENSDARG00000076283	snrpd3l	100	95.312	Danio_rerio
ENSCAFG00000017258	-	97	77.049	ENSDNOG00000042638	-	100	77.049	Dasypus_novemcinctus
ENSCAFG00000017258	-	100	99.206	ENSDNOG00000047424	-	100	99.206	Dasypus_novemcinctus
ENSCAFG00000017258	-	100	89.147	ENSDNOG00000018004	-	100	89.147	Dasypus_novemcinctus
ENSCAFG00000017258	-	100	84.127	ENSDORG00000027706	-	100	84.127	Dipodomys_ordii
ENSCAFG00000017258	-	87	90.909	ENSDORG00000002800	-	100	90.909	Dipodomys_ordii
ENSCAFG00000017258	-	100	74.603	ENSDORG00000027169	-	100	74.603	Dipodomys_ordii
ENSCAFG00000017258	-	84	83.019	FBgn0023167	SmD3	71	82.243	Drosophila_melanogaster
ENSCAFG00000017258	-	100	99.206	ENSEASG00005000273	SNRPD3	100	99.206	Equus_asinus_asinus
ENSCAFG00000017258	-	100	99.206	ENSECAG00000023316	SNRPD3	100	99.206	Equus_caballus
ENSCAFG00000017258	-	100	97.619	ENSEEUG00000015518	SNRPD3	100	97.619	Erinaceus_europaeus
ENSCAFG00000017258	-	100	96.063	ENSELUG00000001854	snrpd3	100	96.063	Esox_lucius
ENSCAFG00000017258	-	100	97.638	ENSELUG00000010092	snrpd3l	100	97.638	Esox_lucius
ENSCAFG00000017258	-	100	99.206	ENSFCAG00000001512	SNRPD3	100	99.206	Felis_catus
ENSCAFG00000017258	-	100	99.206	ENSFALG00000007303	SNRPD3	100	99.206	Ficedula_albicollis
ENSCAFG00000017258	-	100	99.206	ENSFDAG00000010772	SNRPD3	100	99.206	Fukomys_damarensis
ENSCAFG00000017258	-	100	97.638	ENSFHEG00000010754	snrpd3l	100	97.638	Fundulus_heteroclitus
ENSCAFG00000017258	-	100	97.656	ENSGMOG00000008469	snrpd3l	100	97.656	Gadus_morhua
ENSCAFG00000017258	-	100	99.206	ENSGALG00000006596	SNRPD3	100	99.206	Gallus_gallus
ENSCAFG00000017258	-	84	99.057	ENSGAFG00000006661	snrpd3l	82	99.057	Gambusia_affinis
ENSCAFG00000017258	-	100	97.656	ENSGACG00000017533	snrpd3l	100	97.656	Gasterosteus_aculeatus
ENSCAFG00000017258	-	100	99.206	ENSGAGG00000023325	SNRPD3	100	99.206	Gopherus_agassizii
ENSCAFG00000017258	-	100	99.206	ENSGGOG00000015640	SNRPD3	100	99.206	Gorilla_gorilla
ENSCAFG00000017258	-	100	98.425	ENSHBUG00000001332	snrpd3l	100	98.425	Haplochromis_burtoni
ENSCAFG00000017258	-	99	96.000	ENSHGLG00000009844	-	99	96.000	Heterocephalus_glaber_female
ENSCAFG00000017258	-	100	99.206	ENSHGLG00000016496	SNRPD3	100	99.206	Heterocephalus_glaber_female
ENSCAFG00000017258	-	99	96.000	ENSHGLG00100011326	-	99	96.000	Heterocephalus_glaber_male
ENSCAFG00000017258	-	100	99.206	ENSHGLG00100019304	SNRPD3	100	99.206	Heterocephalus_glaber_male
ENSCAFG00000017258	-	100	97.638	ENSHCOG00000014396	snrpd3l	100	97.638	Hippocampus_comes
ENSCAFG00000017258	-	100	95.312	ENSIPUG00000003083	snrpd3	100	95.312	Ictalurus_punctatus
ENSCAFG00000017258	-	100	99.206	ENSSTOG00000025674	SNRPD3	100	99.206	Ictidomys_tridecemlineatus
ENSCAFG00000017258	-	100	99.206	ENSJJAG00000013303	Snrpd3	100	99.206	Jaculus_jaculus
ENSCAFG00000017258	-	100	97.638	ENSKMAG00000012493	snrpd3l	100	97.638	Kryptolebias_marmoratus
ENSCAFG00000017258	-	100	98.425	ENSLBEG00000003202	snrpd3l	100	98.425	Labrus_bergylta
ENSCAFG00000017258	-	100	98.413	ENSLACG00000015192	SNRPD3	100	98.413	Latimeria_chalumnae
ENSCAFG00000017258	-	100	98.425	ENSLOCG00000006978	snrpd3	100	98.425	Lepisosteus_oculatus
ENSCAFG00000017258	-	100	99.206	ENSLAFG00000028180	SNRPD3	100	99.206	Loxodonta_africana
ENSCAFG00000017258	-	100	99.206	ENSMFAG00000033628	SNRPD3	100	99.206	Macaca_fascicularis
ENSCAFG00000017258	-	100	99.206	ENSMMUG00000000264	SNRPD3	100	99.206	Macaca_mulatta
ENSCAFG00000017258	-	100	99.206	ENSMNEG00000020857	SNRPD3	100	99.206	Macaca_nemestrina
ENSCAFG00000017258	-	100	99.206	ENSMLEG00000037548	SNRPD3	100	99.206	Mandrillus_leucophaeus
ENSCAFG00000017258	-	100	98.425	ENSMZEG00005017664	snrpd3l	100	98.425	Maylandia_zebra
ENSCAFG00000017258	-	100	99.206	ENSMAUG00000021393	Snrpd3	100	99.206	Mesocricetus_auratus
ENSCAFG00000017258	-	100	99.206	ENSMICG00000034782	SNRPD3	100	99.206	Microcebus_murinus
ENSCAFG00000017258	-	100	99.206	ENSMOCG00000009361	Snrpd3	100	99.206	Microtus_ochrogaster
ENSCAFG00000017258	-	97	89.344	ENSMMOG00000020985	snrpd3l	67	99.057	Mola_mola
ENSCAFG00000017258	-	100	99.206	ENSMODG00000004024	SNRPD3	100	99.206	Monodelphis_domestica
ENSCAFG00000017258	-	100	98.425	ENSMALG00000013334	snrpd3l	100	98.425	Monopterus_albus
ENSCAFG00000017258	-	100	99.206	MGP_CAROLIEiJ_G0015441	Snrpd3	100	99.206	Mus_caroli
ENSCAFG00000017258	-	100	99.206	ENSMUSG00000020180	Snrpd3	100	99.206	Mus_musculus
ENSCAFG00000017258	-	100	99.206	MGP_PahariEiJ_G0030857	Snrpd3	100	99.206	Mus_pahari
ENSCAFG00000017258	-	100	99.206	MGP_SPRETEiJ_G0016254	Snrpd3	100	99.206	Mus_spretus
ENSCAFG00000017258	-	100	99.206	ENSMPUG00000002889	SNRPD3	100	99.206	Mustela_putorius_furo
ENSCAFG00000017258	-	100	99.206	ENSMLUG00000009838	SNRPD3	100	99.206	Myotis_lucifugus
ENSCAFG00000017258	-	100	99.206	ENSNGAG00000010328	Snrpd3	100	99.206	Nannospalax_galili
ENSCAFG00000017258	-	100	98.425	ENSNBRG00000020307	snrpd3l	100	98.425	Neolamprologus_brichardi
ENSCAFG00000017258	-	100	99.206	ENSNLEG00000035757	SNRPD3	100	99.206	Nomascus_leucogenys
ENSCAFG00000017258	-	100	99.206	ENSMEUG00000003772	SNRPD3	100	99.206	Notamacropus_eugenii
ENSCAFG00000017258	-	100	99.206	ENSOPRG00000005763	SNRPD3	100	99.206	Ochotona_princeps
ENSCAFG00000017258	-	100	96.032	ENSODEG00000020162	-	100	96.032	Octodon_degus
ENSCAFG00000017258	-	100	99.206	ENSODEG00000008064	-	100	99.206	Octodon_degus
ENSCAFG00000017258	-	100	98.413	ENSODEG00000019354	-	100	98.413	Octodon_degus
ENSCAFG00000017258	-	100	98.425	ENSONIG00000003828	snrpd3l	100	98.425	Oreochromis_niloticus
ENSCAFG00000017258	-	100	99.206	ENSOANG00000002463	SNRPD3	100	99.206	Ornithorhynchus_anatinus
ENSCAFG00000017258	-	100	99.206	ENSOCUG00000004845	SNRPD3	100	99.206	Oryctolagus_cuniculus
ENSCAFG00000017258	-	100	98.425	ENSORLG00000010586	snrpd3l	100	98.425	Oryzias_latipes
ENSCAFG00000017258	-	100	98.425	ENSORLG00020011769	snrpd3l	100	98.425	Oryzias_latipes_hni
ENSCAFG00000017258	-	100	98.425	ENSORLG00015022940	snrpd3l	100	98.425	Oryzias_latipes_hsok
ENSCAFG00000017258	-	100	97.638	ENSOMEG00000022734	snrpd3l	100	97.638	Oryzias_melastigma
ENSCAFG00000017258	-	100	99.206	ENSOGAG00000012708	SNRPD3	100	99.206	Otolemur_garnettii
ENSCAFG00000017258	-	100	99.206	ENSOARG00000013984	SNRPD3	100	99.206	Ovis_aries
ENSCAFG00000017258	-	100	99.206	ENSPPAG00000039191	SNRPD3	100	99.206	Pan_paniscus
ENSCAFG00000017258	-	100	99.206	ENSPPRG00000001470	SNRPD3	100	99.206	Panthera_pardus
ENSCAFG00000017258	-	100	99.206	ENSPTIG00000016610	SNRPD3	100	99.206	Panthera_tigris_altaica
ENSCAFG00000017258	-	100	99.206	ENSPTRG00000014176	SNRPD3	100	99.206	Pan_troglodytes
ENSCAFG00000017258	-	100	99.206	ENSPANG00000009279	SNRPD3	100	99.206	Papio_anubis
ENSCAFG00000017258	-	100	96.063	ENSPKIG00000006412	snrpd3l	100	96.063	Paramormyrops_kingsleyae
ENSCAFG00000017258	-	100	97.619	ENSPSIG00000010022	-	100	97.619	Pelodiscus_sinensis
ENSCAFG00000017258	-	98	91.057	ENSPMGG00000004486	snrpd3l	100	91.057	Periophthalmus_magnuspinnatus
ENSCAFG00000017258	-	100	99.206	ENSPCIG00000010910	SNRPD3	84	99.206	Phascolarctos_cinereus
ENSCAFG00000017258	-	100	97.638	ENSPFOG00000019673	snrpd3l	100	97.638	Poecilia_formosa
ENSCAFG00000017258	-	100	97.638	ENSPLAG00000023249	snrpd3l	100	97.638	Poecilia_latipinna
ENSCAFG00000017258	-	100	97.638	ENSPMEG00000008482	snrpd3l	100	97.638	Poecilia_mexicana
ENSCAFG00000017258	-	84	99.057	ENSPREG00000007532	snrpd3l	87	99.057	Poecilia_reticulata
ENSCAFG00000017258	-	100	99.206	ENSPPYG00000011648	SNRPD3	100	99.206	Pongo_abelii
ENSCAFG00000017258	-	100	99.206	ENSPCAG00000002065	SNRPD3	100	99.206	Procavia_capensis
ENSCAFG00000017258	-	100	99.206	ENSPCOG00000011842	SNRPD3	100	99.206	Propithecus_coquereli
ENSCAFG00000017258	-	100	98.413	ENSPVAG00000011405	SNRPD3	100	98.413	Pteropus_vampyrus
ENSCAFG00000017258	-	100	98.425	ENSPNYG00000013344	snrpd3l	100	98.425	Pundamilia_nyererei
ENSCAFG00000017258	-	100	90.625	ENSPNAG00000008683	snrpd3l	100	93.750	Pygocentrus_nattereri
ENSCAFG00000017258	-	100	90.551	ENSPNAG00000010547	snrpd3	100	94.488	Pygocentrus_nattereri
ENSCAFG00000017258	-	100	99.206	ENSRNOG00000050410	Snrpd3	100	99.206	Rattus_norvegicus
ENSCAFG00000017258	-	100	99.206	ENSRBIG00000029017	SNRPD3	100	99.206	Rhinopithecus_bieti
ENSCAFG00000017258	-	100	99.206	ENSRROG00000031152	SNRPD3	100	99.206	Rhinopithecus_roxellana
ENSCAFG00000017258	-	75	46.316	YLR147C	SMD3	92	46.316	Saccharomyces_cerevisiae
ENSCAFG00000017258	-	100	96.063	ENSSFOG00015007002	snrpd3l	100	96.063	Scleropages_formosus
ENSCAFG00000017258	-	100	96.063	ENSSFOG00015014180	snrpd3l	100	96.063	Scleropages_formosus
ENSCAFG00000017258	-	100	98.425	ENSSMAG00000019307	snrpd3l	100	98.425	Scophthalmus_maximus
ENSCAFG00000017258	-	100	98.425	ENSSDUG00000006870	snrpd3l	100	98.425	Seriola_dumerili
ENSCAFG00000017258	-	100	98.425	ENSSLDG00000022664	snrpd3l	100	98.425	Seriola_lalandi_dorsalis
ENSCAFG00000017258	-	100	99.206	ENSSARG00000002357	SNRPD3	100	99.206	Sorex_araneus
ENSCAFG00000017258	-	100	98.413	ENSSPUG00000014285	SNRPD3	100	98.413	Sphenodon_punctatus
ENSCAFG00000017258	-	100	99.206	ENSSSCG00000010058	SNRPD3	100	99.206	Sus_scrofa
ENSCAFG00000017258	-	100	99.206	ENSTGUG00000010079	SNRPD3	100	99.206	Taeniopygia_guttata
ENSCAFG00000017258	-	84	99.057	ENSTRUG00000023976	snrpd3l	90	99.057	Takifugu_rubripes
ENSCAFG00000017258	-	100	97.638	ENSTNIG00000005323	snrpd3l	100	97.638	Tetraodon_nigroviridis
ENSCAFG00000017258	-	100	99.206	ENSTBEG00000014334	SNRPD3	100	99.206	Tupaia_belangeri
ENSCAFG00000017258	-	100	99.206	ENSTTRG00000006022	SNRPD3	100	99.206	Tursiops_truncatus
ENSCAFG00000017258	-	100	99.206	ENSUAMG00000010767	SNRPD3	100	99.206	Ursus_americanus
ENSCAFG00000017258	-	100	99.206	ENSUMAG00000001670	SNRPD3	100	99.206	Ursus_maritimus
ENSCAFG00000017258	-	100	99.206	ENSVPAG00000000241	SNRPD3	100	99.206	Vicugna_pacos
ENSCAFG00000017258	-	84	99.057	ENSVVUG00000019340	SNRPD3	53	99.057	Vulpes_vulpes
ENSCAFG00000017258	-	100	82.812	ENSXETG00000024918	snrpd3	100	82.812	Xenopus_tropicalis
ENSCAFG00000017258	-	100	97.638	ENSXCOG00000004795	snrpd3l	100	97.638	Xiphophorus_couchianus
ENSCAFG00000017258	-	100	97.638	ENSXMAG00000001133	snrpd3l	100	97.638	Xiphophorus_maculatus