EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCAFP00000025686	RRM_1	PF00076.22	4.2e-15	1	1
ENSCAFP00000025686	HnRNPA1	PF11627.8	1.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCAFT00000027618	-	804	-	ENSCAFP00000025686	268 (aa)	-	F1PSN2

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCAFG00000017424	-	65	51.064	ENSCAFG00000002885	HNRNPA2B1	90	41.447
ENSCAFG00000017424	-	99	56.314	ENSCAFG00000017180	-	92	56.314
ENSCAFG00000017424	-	84	64.286	ENSCAFG00000005762	-	69	38.174
ENSCAFG00000017424	-	68	60.000	ENSCAFG00000003493	-	92	56.081
ENSCAFG00000017424	-	99	55.046	ENSCAFG00000025274	-	52	55.046
ENSCAFG00000017424	-	73	54.327	ENSCAFG00000005307	-	86	54.774
ENSCAFG00000017424	-	93	55.797	ENSCAFG00000019097	-	93	56.727
ENSCAFG00000017424	-	63	60.109	ENSCAFG00000013497	HNRNPA3	66	54.297
ENSCAFG00000017424	-	74	56.621	ENSCAFG00000030052	-	80	59.009
ENSCAFG00000017424	-	59	31.098	ENSCAFG00000019528	DAZAP1	66	31.098
ENSCAFG00000017424	-	94	52.347	ENSCAFG00000006327	-	91	54.266
ENSCAFG00000017424	-	100	53.199	ENSCAFG00000005164	-	90	54.545
ENSCAFG00000017424	-	96	51.237	ENSCAFG00000000687	-	88	53.091
ENSCAFG00000017424	-	100	48.097	ENSCAFG00000030783	-	92	48.264
ENSCAFG00000017424	-	99	53.782	ENSCAFG00000017316	-	90	56.475
ENSCAFG00000017424	-	71	43.500	ENSCAFG00000006110	-	96	39.919
ENSCAFG00000017424	-	100	56.949	ENSCAFG00000032455	-	92	56.949
ENSCAFG00000017424	-	100	55.369	ENSCAFG00000006663	-	92	55.369
ENSCAFG00000017424	-	78	65.957	ENSCAFG00000006580	-	66	61.600
ENSCAFG00000017424	-	100	57.944	ENSCAFG00000006036	-	52	57.944
ENSCAFG00000017424	-	100	48.443	ENSCAFG00000031044	-	92	48.611
ENSCAFG00000017424	-	55	59.375	ENSCAFG00000002232	-	91	48.173
ENSCAFG00000017424	-	67	30.000	ENSCAFG00000010283	MSI1	52	30.000
ENSCAFG00000017424	-	62	39.326	ENSCAFG00000001132	HNRNPA0	58	39.227
ENSCAFG00000017424	-	100	49.147	ENSCAFG00000000389	-	92	51.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCAFG00000017424	-	78	66.667	ENSCSAG00000000148	-	66	57.831	Chlorocebus_sabaeus
ENSCAFG00000017424	-	100	51.246	ENSCSAG00000004770	-	90	51.246	Chlorocebus_sabaeus
ENSCAFG00000017424	-	74	43.478	ENSDNOG00000037420	-	87	42.995	Dasypus_novemcinctus
ENSCAFG00000017424	-	94	48.450	ENSDNOG00000039025	-	96	48.016	Dasypus_novemcinctus
ENSCAFG00000017424	-	58	57.831	ENSDNOG00000036385	-	74	54.945	Dasypus_novemcinctus
ENSCAFG00000017424	-	78	63.889	ENSETEG00000010614	-	91	41.786	Echinops_telfairi
ENSCAFG00000017424	-	100	37.545	ENSETEG00000013374	-	90	37.545	Echinops_telfairi
ENSCAFG00000017424	-	100	42.349	ENSETEG00000007429	-	82	41.221	Echinops_telfairi
ENSCAFG00000017424	-	61	38.037	ENSETEG00000005266	-	53	52.439	Echinops_telfairi
ENSCAFG00000017424	-	67	56.477	ENSELUG00000020089	-	81	48.846	Esox_lucius
ENSCAFG00000017424	-	59	53.012	ENSFDAG00000009166	-	89	46.324	Fukomys_damarensis
ENSCAFG00000017424	-	67	52.356	ENSMPUG00000000096	-	76	53.061	Mustela_putorius_furo
ENSCAFG00000017424	-	65	56.915	ENSNLEG00000034385	-	54	55.779	Nomascus_leucogenys
ENSCAFG00000017424	-	80	63.889	ENSNLEG00000029989	-	93	46.526	Nomascus_leucogenys
ENSCAFG00000017424	-	65	63.830	ENSOCUG00000022668	-	92	52.716	Oryctolagus_cuniculus
ENSCAFG00000017424	-	100	56.122	ENSPPRG00000018110	-	97	57.823	Panthera_pardus
ENSCAFG00000017424	-	99	42.643	ENSPPYG00000004746	-	67	49.407	Pongo_abelii